RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCC2	YDR180W	ECM14	P38836	430 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	PAC2	P39937	518 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	YIL067C	P40514	678 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	YJR011C	P47086	261 aa	Predicted RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	MGA1	P53050	456 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	JAC1	P53193	184 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	FRE4	P53746	719 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	DIG2	Q03373	323 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	API2	Q04413	109 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	DPP1	Q05521	289 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	YTH1	Q06102	208 aa	Predicted RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	BER1	Q06688	274 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	CSI2	Q08054	341 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	LDS2	Q08218	356 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	UTP23	Q12339	254 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	YOR338W	Q99326	363 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	MCK1	P21965	375 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	EXG1	P23776	448 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	MXR2	P25566	168 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	ERG1	P32476	496 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	GAT4	P40569	121 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	PAU5	P43575	122 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	HIT1	P46973	164 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	CIS3	P47001	227 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	CAX4	P53223	239 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	MTM1	P53320	366 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	ATP23	P53722	227 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	YNR077C	P53758	84 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	YLR460C	P54007	376 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	TSA2	Q04120	196 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	ICT1	Q12385	394 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	SLO1	Q3E784	85 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	COA6	Q3E846	104 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	FAS1	P07149	2051 aa	Known RBP	0.84	□□□□□ -2.27
SCC2	YDR180W	NOP1	P15646	327 aa	Known RBP	0.84	□□□□□ -2.27
SCC2	YDR180W	CPT1	P17898	393 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	INO2	P26798	304 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	YBR090C	P38253	122 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	EFM1	P38732	585 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	YER134C	P40081	178 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	YGR269W	P40326	108 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	YNL260C	P53846	198 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	PEX12	Q04370	399 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	YKL023C-A	Q2V2P3	75 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	SUS1	Q6WNK7	96 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	UBA3	Q99344	299 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	RPS14A	P06367	137 aa	Known RBP	0.84	□□□□□ -2.27
SCC2	YDR180W	CPA1	P07258	411 aa	Known RBP	0.84	□□□□□ -2.27
SCC2	YDR180W	YKR070W	P36151	352 aa	Known RBP	0.84	□□□□□ -2.27
SCC2	YDR180W	PAU24	P38155	120 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	RPS14B	P39516	138 aa	Known RBP	0.84	□□□□□ -2.27
SCC2	YDR180W	CCS1	P40202	249 aa	Known RBP	0.84	□□□□□ -2.27
SCC2	YDR180W	RPL13B	P40212	199 aa	Known RBP	0.84	□□□□□ -2.27
SCC2	YDR180W	LYS12	P40495	371 aa	Known RBP	0.84	□□□□□ -2.27
SCC2	YDR180W	ATG18	P43601	500 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	CGR1	P53188	120 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	COX12	Q01519	83 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	FSH2	Q05015	223 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	MRX9	Q07349	420 aa	Known RBP	0.84	□□□□□ -2.27
SCC2	YDR180W	FCY1	Q12178	158 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	YOS1	Q3E834	85 aa		0.84	□□□□□ -2.27
SCC2	YDR180W	YAR066W	P0CX18	203 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	YHR214W	P0CX19	203 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	PHO85	P17157	305 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	MKK1	P32490	508 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	PAU2	P32612	120 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	SKG6	P32900	734 aa	Predicted RBP	0.84	□□□□□ -2.28
SCC2	YDR180W	SWD2	P36104	329 aa	Predicted RBP	0.84	□□□□□ -2.28
SCC2	YDR180W	GPI18	P38211	433 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	DOG1	P38774	246 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	NSA2	P40078	261 aa	Known RBP	0.84	□□□□□ -2.28
SCC2	YDR180W	YJL213W	P40896	331 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	EGT2	P42835	1041 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	GLG2	P47011	380 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	YIP1	P53039	248 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	ERG25	P53045	309 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	CRH1	P53301	507 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	HST4	P53688	370 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	LSM3	P57743	89 aa	Known RBP	0.84	□□□□□ -2.28
SCC2	YDR180W	ADH6	Q04894	360 aa	Known RBP	0.84	□□□□□ -2.28
SCC2	YDR180W	LOA1	Q06508	300 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	ATG10	Q07879	167 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	GAT3	Q07928	141 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	FDH1	Q08911	376 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	USB1	Q12208	290 aa	Known RBP	0.84	□□□□□ -2.28
SCC2	YDR180W	TDA8	Q6B2U8	126 aa		0.84	□□□□□ -2.28
SCC2	YDR180W	YOL162W	P0CF19	215 aa		0.83	□□□□□ -2.28
SCC2	YDR180W	UGX2	P32772	223 aa		0.83	□□□□□ -2.28
SCC2	YDR180W	KTI12	P34253	313 aa	Known RBP	0.83	□□□□□ -2.28
SCC2	YDR180W	PRY2	P36110	329 aa		0.83	□□□□□ -2.28
SCC2	YDR180W	YHL026C	P38740	315 aa		0.83	□□□□□ -2.28
SCC2	YDR180W	LYS1	P38998	373 aa	RIP-Chip data	0.83	□□□□□ -2.28	not detected
SCC2	YDR180W	YAL037W	P39728	267 aa		0.83	□□□□□ -2.28
SCC2	YDR180W	YER085C	P40058	173 aa		0.83	□□□□□ -2.28
SCC2	YDR180W	YNL200C	P40165	246 aa	Known RBP	0.83	□□□□□ -2.28
SCC2	YDR180W	GLC8	P41818	229 aa		0.83	□□□□□ -2.28
SCC2	YDR180W	CIN2	P46670	268 aa		0.83	□□□□□ -2.28
SCC2	YDR180W	YGL101W	P53144	215 aa		0.83	□□□□□ -2.28
SCC2	YDR180W	SDS23	P53172	527 aa		0.83	□□□□□ -2.28
SCC2	YDR180W	TDA7	P53882	636 aa	Predicted RBP	0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms