RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W SYM1Q06563 197 aa3.46□□□□□ -1.86
RER1YCL001W YPD1Q07688 167 aa3.46□□□□□ -1.86
RER1YCL001W TPT1Q12272 230 aaKnown RBP3.46□□□□□ -1.86
RER1YCL001W MED4Q12343 284 aa3.46□□□□□ -1.86
RER1YCL001W ATO3Q12359 275 aa3.46□□□□□ -1.86
RER1YCL001W BOL1Q3E793 110 aa3.46□□□□□ -1.86
RER1YCL001W PET20Q99373 253 aa3.46□□□□□ -1.86
RER1YCL001W SRY1P36007 326 aa3.45□□□□□ -1.86
RER1YCL001W IPI1P38803 334 aaPredicted RBP3.45□□□□□ -1.86
RER1YCL001W YHR122WP38829 231 aa3.45□□□□□ -1.86
RER1YCL001W HPA3P39979 161 aa3.45□□□□□ -1.86
RER1YCL001W ALG9P53868 555 aaKnown RBP3.45□□□□□ -1.86
RER1YCL001W GIM3P53900 129 aa3.45□□□□□ -1.86
RER1YCL001W YML018CQ03730 393 aa3.45□□□□□ -1.86
RER1YCL001W VBA1Q04301 562 aa3.45□□□□□ -1.86
RER1YCL001W YLR031WQ07978 186 aa3.45□□□□□ -1.86
RER1YCL001W IES3Q12345 250 aa3.45□□□□□ -1.86
RER1YCL001W YGR035W-AQ45U48 73 aa3.45□□□□□ -1.86
RER1YCL001W UBA3Q99344 299 aa3.45□□□□□ -1.86
RER1YCL001W CYC3P06182 269 aa3.44□□□□□ -1.86
RER1YCL001W ROX3P25046 220 aa3.44□□□□□ -1.86
RER1YCL001W INO2P26798 304 aa3.44□□□□□ -1.86
RER1YCL001W ATP3P38077 311 aaKnown RBP3.44□□□□□ -1.86
RER1YCL001W YJR056CP47115 236 aa3.44□□□□□ -1.86
RER1YCL001W AIM25P47140 327 aa3.44□□□□□ -1.86
RER1YCL001W CWC23P52868 283 aaPredicted RBP3.44□□□□□ -1.86
RER1YCL001W CWC25P53854 179 aaKnown RBP3.44□□□□□ -1.86
RER1YCL001W LSM7P53905 115 aaKnown RBP3.44□□□□□ -1.86
RER1YCL001W SPG4Q04438 115 aa3.44□□□□□ -1.86
RER1YCL001W HRD1Q08109 551 aa3.44□□□□□ -1.86
RER1YCL001W YOL029CQ08187 201 aa3.44□□□□□ -1.86
RER1YCL001W SCP1Q08873 200 aa3.44□□□□□ -1.86
RER1YCL001W FCY1Q12178 158 aa3.44□□□□□ -1.86
RER1YCL001W VPS63O13549 108 aa3.43□□□□□ -1.86
RER1YCL001W RPL9AP05738 191 aaKnown RBP3.43□□□□□ -1.86
RER1YCL001W NHP6BP11633 99 aaKnown RBP3.43□□□□□ -1.86
RER1YCL001W CAP2P13517 287 aa3.43□□□□□ -1.86
RER1YCL001W RPL9BP51401 191 aaKnown RBP3.43□□□□□ -1.86
RER1YCL001W ARO8P53090 500 aaKnown RBP3.43□□□□□ -1.86
RER1YCL001W RSM27P53305 110 aa3.43□□□□□ -1.86
RER1YCL001W LPP1Q04396 274 aa3.43□□□□□ -1.86
RER1YCL001W HUG1Q6Q5K6 68 aa3.43□□□□□ -1.86
RER1YCL001W RPS8AP0CX39 200 aaKnown RBP3.42□□□□□ -1.86
RER1YCL001W RPS8BP0CX40 200 aaKnown RBP3.42□□□□□ -1.86
RER1YCL001W YCR016WP25617 290 aaKnown RBP3.42□□□□□ -1.86
RER1YCL001W PRS4P38063 326 aaPredicted RBP3.42□□□□□ -1.86
RER1YCL001W SSO2P39926 295 aa3.42□□□□□ -1.86
RER1YCL001W PCL7P40186 285 aa3.42□□□□□ -1.86
RER1YCL001W SIM1P40472 476 aa3.42□□□□□ -1.86
RER1YCL001W FIP1P45976 327 aa3.42□□□□□ -1.86
RER1YCL001W MEH1Q02205 184 aa3.42□□□□□ -1.86
RER1YCL001W THI74Q04083 370 aa3.42□□□□□ -1.86
RER1YCL001W TSA2Q04120 196 aa3.42□□□□□ -1.86
RER1YCL001W MRPL23Q12487 163 aaPredicted RBP3.42□□□□□ -1.86
RER1YCL001W HTZ1Q12692 134 aaKnown RBP3.42□□□□□ -1.86
RER1YCL001W YOS1Q3E834 85 aa3.42□□□□□ -1.86
RER1YCL001W ARG80P07249 177 aa3.41□□□□□ -1.86
RER1YCL001W QCR2P07257 368 aa3.41□□□□□ -1.86
RER1YCL001W POP5P28005 173 aa3.41□□□□□ -1.86
RER1YCL001W RNP1P32385 249 aa3.41□□□□□ -1.86
RER1YCL001W RAD23P32628 398 aaKnown RBP3.41□□□□□ -1.86
RER1YCL001W YKR045CP36138 183 aa3.41□□□□□ -1.86
RER1YCL001W POP8P38208 133 aa3.41□□□□□ -1.86
RER1YCL001W QDR3P38227 689 aa3.41□□□□□ -1.86
RER1YCL001W YHR138CP38841 114 aaPredicted RBP3.41□□□□□ -1.86
RER1YCL001W AGE2P40529 298 aa3.41□□□□□ -1.86
RER1YCL001W ERG25P53045 309 aa3.41□□□□□ -1.86
RER1YCL001W NIF3P53081 288 aa3.41□□□□□ -1.86
RER1YCL001W MRPS16Q02608 121 aa3.41□□□□□ -1.86
RER1YCL001W NDE2Q07500 545 aa3.41□□□□□ -1.86
RER1YCL001W YNG1Q08465 219 aa3.41□□□□□ -1.86
RER1YCL001W SPS2P08459 502 aa3.4□□□□□ -1.87
RER1YCL001W PUT1P09368 476 aa3.4□□□□□ -1.87
RER1YCL001W PAN3P36102 679 aaPredicted RBP3.4□□□□□ -1.87
RER1YCL001W MRPL3P36516 390 aa3.4□□□□□ -1.87
RER1YCL001W YPC1P38298 316 aa3.4□□□□□ -1.87
RER1YCL001W RFC2P40348 353 aa3.4□□□□□ -1.87
RER1YCL001W VPS55P47111 140 aa3.4□□□□□ -1.87
RER1YCL001W CAB5Q03941 241 aa3.4□□□□□ -1.87
RER1YCL001W PEX10Q05568 337 aa3.4□□□□□ -1.87
RER1YCL001W MCH1Q07376 486 aa3.4□□□□□ -1.87
RER1YCL001W YFH1Q07540 174 aa3.4□□□□□ -1.87
RER1YCL001W JID1Q12350 301 aa3.4□□□□□ -1.87
RER1YCL001W YKL075CP36083 450 aa3.39□□□□□ -1.87
RER1YCL001W GEP4P38812 185 aa3.39□□□□□ -1.87
RER1YCL001W COX14P39103 70 aa3.39□□□□□ -1.87
RER1YCL001W YKE4P40544 346 aa3.39□□□□□ -1.87
RER1YCL001W RPA43P46669 326 aa3.39□□□□□ -1.87
RER1YCL001W HOR7Q05827 59 aa3.39□□□□□ -1.87
RER1YCL001W PAM18Q07914 168 aa3.39□□□□□ -1.87
RER1YCL001W RAD28Q12021 506 aa3.39□□□□□ -1.87
RER1YCL001W YCT1Q12235 531 aa3.39□□□□□ -1.87
RER1YCL001W HTB1P02293 131 aaKnown RBP3.38□□□□□ -1.87
RER1YCL001W YBR242WP38331 238 aa3.38□□□□□ -1.87
RER1YCL001W ARP3P47117 449 aaKnown RBP3.38□□□□□ -1.87
RER1YCL001W YGR219WP53307 113 aa3.38□□□□□ -1.87
RER1YCL001W SSU72P53538 206 aaPredicted RBP3.38□□□□□ -1.87
RER1YCL001W HAL1Q01766 294 aa3.38□□□□□ -1.87
RER1YCL001W VPS71Q03433 280 aa3.38□□□□□ -1.87
RER1YCL001W ATG31Q12421 196 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms