RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	AIM2	P39721	246 aa		1.25	□□□□□ -2.21
DOT6	YER088C	GLR1	P41921	483 aa	Known RBP	1.25	□□□□□ -2.21
DOT6	YER088C	ADO1	P47143	340 aa	Known RBP	1.25	□□□□□ -2.21
DOT6	YER088C	MET31	Q03081	177 aa		1.25	□□□□□ -2.21
DOT6	YER088C	GRX3	Q03835	250 aa		1.25	□□□□□ -2.21
DOT6	YER088C	YLR283W	Q05867	314 aa		1.25	□□□□□ -2.21
DOT6	YER088C	YET3	Q07451	203 aa		1.25	□□□□□ -2.21
DOT6	YER088C	CSI2	Q08054	341 aa		1.25	□□□□□ -2.21
DOT6	YER088C	MSH5	Q12175	901 aa		1.25	□□□□□ -2.21
DOT6	YER088C	SME1	Q12330	94 aa	Predicted RBP	1.25	□□□□□ -2.21
DOT6	YER088C	ISD11	Q6Q560	94 aa		1.25	□□□□□ -2.21
DOT6	YER088C	YMR316C-A	I2HB70	103 aa		1.24	□□□□□ -2.21
DOT6	YER088C	CAM1	P29547	415 aa	Known RBP	1.24	□□□□□ -2.21
DOT6	YER088C	DOA4	P32571	926 aa		1.24	□□□□□ -2.21
DOT6	YER088C	CLB6	P32943	380 aa		1.24	□□□□□ -2.21
DOT6	YER088C	CAF4	P36130	643 aa		1.24	□□□□□ -2.21
DOT6	YER088C	THO1	P40040	218 aa	Known RBP	1.24	□□□□□ -2.21
DOT6	YER088C	YER121W	P40076	114 aa		1.24	□□□□□ -2.21
DOT6	YER088C	COX15	P40086	486 aa		1.24	□□□□□ -2.21
DOT6	YER088C	PEP8	P40335	379 aa		1.24	□□□□□ -2.21
DOT6	YER088C	MSS2	P40990	351 aa		1.24	□□□□□ -2.21
DOT6	YER088C	OTU1	P43558	301 aa		1.24	□□□□□ -2.21
DOT6	YER088C	YFR054C	P43622	192 aa		1.24	□□□□□ -2.21
DOT6	YER088C	PAC10	P48363	199 aa		1.24	□□□□□ -2.21
DOT6	YER088C	ASI3	P53983	676 aa		1.24	□□□□□ -2.21
DOT6	YER088C	YDR476C	Q03362	224 aa		1.24	□□□□□ -2.21
DOT6	YER088C	VPS71	Q03433	280 aa		1.24	□□□□□ -2.21
DOT6	YER088C	BNA7	Q04066	261 aa		1.24	□□□□□ -2.21
DOT6	YER088C	SML1	Q04964	104 aa		1.24	□□□□□ -2.21
DOT6	YER088C	CSM4	Q08955	156 aa		1.24	□□□□□ -2.21
DOT6	YER088C	ADF1	Q2V2Q1	113 aa		1.24	□□□□□ -2.21
DOT6	YER088C	NHP6B	P11633	99 aa	Known RBP	1.23	□□□□□ -2.21
DOT6	YER088C	SNF6	P18888	332 aa		1.23	□□□□□ -2.21
DOT6	YER088C	MRPL25	P23369	157 aa		1.23	□□□□□ -2.21
DOT6	YER088C	YBR096W	P38256	230 aa		1.23	□□□□□ -2.21
DOT6	YER088C	YHR180W	P38868	163 aa		1.23	□□□□□ -2.21
DOT6	YER088C	FMP32	P43557	207 aa		1.23	□□□□□ -2.21
DOT6	YER088C	AIF1	P52923	378 aa		1.23	□□□□□ -2.21
DOT6	YER088C	USE1	P53146	245 aa		1.23	□□□□□ -2.21
DOT6	YER088C	NOP19	P53317	196 aa	Predicted RBP	1.23	□□□□□ -2.21
DOT6	YER088C	IRC19	Q07843	230 aa		1.23	□□□□□ -2.21
DOT6	YER088C	UIP4	Q08926	304 aa		1.23	□□□□□ -2.21
DOT6	YER088C	SNU23	Q12368	194 aa	Predicted RBP	1.23	□□□□□ -2.21
DOT6	YER088C	MATALPHA1	P0CY06	175 aa		1.23	□□□□□ -2.21
DOT6	YER088C	HMLALPHA1	P0CY07	175 aa		1.23	□□□□□ -2.21
DOT6	YER088C	BUB2	P26448	306 aa	Predicted RBP	1.23	□□□□□ -2.21
DOT6	YER088C	CLG1	P35190	452 aa		1.23	□□□□□ -2.21
DOT6	YER088C	FZO1	P38297	855 aa		1.23	□□□□□ -2.21
DOT6	YER088C	MAL13	P53338	473 aa		1.23	□□□□□ -2.21
DOT6	YER088C	YMR279C	Q03263	540 aa		1.23	□□□□□ -2.21
DOT6	YER088C	YDR391C	Q04170	232 aa		1.23	□□□□□ -2.21
DOT6	YER088C	PEX10	Q05568	337 aa		1.23	□□□□□ -2.21
DOT6	YER088C	ATG38	Q05789	226 aa	Known RBP	1.23	□□□□□ -2.21
DOT6	YER088C	ATG17	Q06410	417 aa		1.23	□□□□□ -2.21
DOT6	YER088C	PRP11	Q07350	266 aa	Predicted RBP	1.23	□□□□□ -2.21
DOT6	YER088C	FIT3	Q08907	204 aa		1.23	□□□□□ -2.21
DOT6	YER088C	SNF8	Q12483	233 aa		1.23	□□□□□ -2.21
DOT6	YER088C	YOR343C	Q12484	108 aa		1.23	□□□□□ -2.21
DOT6	YER088C	YPL119C-A	Q3E751	87 aa		1.23	□□□□□ -2.21
DOT6	YER088C	SUA7	P29055	345 aa	Predicted RBP	1.22	□□□□□ -2.21
DOT6	YER088C	QRI5	P32344	111 aa		1.22	□□□□□ -2.21
DOT6	YER088C	VMA6	P32366	345 aa	Known RBP	1.22	□□□□□ -2.21
DOT6	YER088C	SEC17	P32602	292 aa		1.22	□□□□□ -2.21
DOT6	YER088C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	1.22	□□□□□ -2.21	not detected
DOT6	YER088C	CUE1	P38428	203 aa		1.22	□□□□□ -2.21
DOT6	YER088C	AGE2	P40529	298 aa		1.22	□□□□□ -2.21
DOT6	YER088C	YJL028W	P47062	111 aa		1.22	□□□□□ -2.21
DOT6	YER088C	GEP7	P53171	287 aa		1.22	□□□□□ -2.21
DOT6	YER088C	SLX9	P53251	210 aa	Predicted RBP	1.22	□□□□□ -2.21
DOT6	YER088C	GIM3	P53900	129 aa		1.22	□□□□□ -2.21
DOT6	YER088C	AAH1	P53909	347 aa		1.22	□□□□□ -2.21
DOT6	YER088C	TLG1	Q03322	224 aa		1.22	□□□□□ -2.21
DOT6	YER088C	GRH1	Q04410	372 aa	Known RBP	1.22	□□□□□ -2.21
DOT6	YER088C	SSQ1	Q05931	657 aa	Predicted RBP	1.22	□□□□□ -2.21
DOT6	YER088C	YPR098C	Q06089	161 aa		1.22	□□□□□ -2.21
DOT6	YER088C	SPO77	Q06134	477 aa		1.22	□□□□□ -2.21
DOT6	YER088C	COQ10	Q08058	207 aa		1.22	□□□□□ -2.21
DOT6	YER088C	BRX1	Q08235	291 aa	Known RBP	1.22	□□□□□ -2.21
DOT6	YER088C	RRS1	Q08746	203 aa	Known RBP	1.22	□□□□□ -2.21
DOT6	YER088C	YCL048W-A	Q2V2Q2	79 aa		1.22	□□□□□ -2.21
DOT6	YER088C	RAS2	P01120	322 aa	Known RBP	1.22	□□□□□ -2.21
DOT6	YER088C	STE18	P18852	110 aa		1.22	□□□□□ -2.21
DOT6	YER088C	TEM1	P38987	245 aa		1.22	□□□□□ -2.21
DOT6	YER088C	YNR064C	P53750	290 aa		1.22	□□□□□ -2.21
DOT6	YER088C	RDS3	Q06835	107 aa	Predicted RBP	1.22	□□□□□ -2.21
DOT6	YER088C	YCT1	Q12235	531 aa		1.22	□□□□□ -2.21
DOT6	YER088C	JLP1	Q12358	412 aa		1.22	□□□□□ -2.21
DOT6	YER088C	YHR214C-E	Q8TGK0	99 aa		1.22	□□□□□ -2.21
DOT6	YER088C	YEL009C-A	A0A023PZF2	135 aa		1.21	□□□□□ -2.22
DOT6	YER088C	THP2	O13539	261 aa	Known RBP	1.21	□□□□□ -2.22
DOT6	YER088C	TIM9	O74700	87 aa		1.21	□□□□□ -2.22
DOT6	YER088C	ARG80	P07249	177 aa		1.21	□□□□□ -2.22
DOT6	YER088C	PET9	P18239	318 aa	Known RBP	1.21	□□□□□ -2.22
DOT6	YER088C	RPS1B	P23248	255 aa	Known RBP	1.21	□□□□□ -2.22
DOT6	YER088C	DPB2	P24482	689 aa	Predicted RBP	1.21	□□□□□ -2.22
DOT6	YER088C	HOM6	P31116	359 aa	Known RBP	1.21	□□□□□ -2.22
DOT6	YER088C	TCA17	P32613	152 aa		1.21	□□□□□ -2.22
DOT6	YER088C	JEN1	P36035	616 aa		1.21	□□□□□ -2.22
DOT6	YER088C	SMB1	P40018	196 aa	Known RBP	1.21	□□□□□ -2.22
DOT6	YER088C	GON7	P46984	123 aa		1.21	□□□□□ -2.22

Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms