RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A FMP23P38231 175 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A PDS1P40316 373 aaPredicted RBP2.93□□□□□ -1.94
YNL054W-AYNL054W-A FUS2Q05670 677 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A YOL024WQ08172 172 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A CMC2Q3E7A4 109 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A URA5P13298 226 aaKnown RBP2.92□□□□□ -1.94
YNL054W-AYNL054W-A MDH3P32419 343 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
YNL054W-AYNL054W-A CLG1P35190 452 aa2.92□□□□□ -1.94
YNL054W-AYNL054W-A CGI121Q03705 181 aaKnown RBP2.92□□□□□ -1.94
YNL054W-AYNL054W-A RIO1Q12196 484 aaKnown RBP2.92□□□□□ -1.94
YNL054W-AYNL054W-A TSC3Q3E790 80 aa2.92□□□□□ -1.94
YNL054W-AYNL054W-A FBA1P14540 359 aaKnown RBP2.91□□□□□ -1.94
YNL054W-AYNL054W-A YCR090CP25654 182 aaKnown RBP2.91□□□□□ -1.94
YNL054W-AYNL054W-A GLE2P40066 365 aa2.91□□□□□ -1.94
YNL054W-AYNL054W-A ARP3P47117 449 aaKnown RBP2.91□□□□□ -1.94
YNL054W-AYNL054W-A DOC1P53068 250 aa2.91□□□□□ -1.94
YNL054W-AYNL054W-A YGR219WP53307 113 aa2.91□□□□□ -1.94
YNL054W-AYNL054W-A YNR062CP53748 327 aa2.91□□□□□ -1.94
YNL054W-AYNL054W-A ATO3Q12359 275 aa2.91□□□□□ -1.94
YNL054W-AYNL054W-A PGD1P40356 397 aa2.9□□□□□ -1.95
YNL054W-AYNL054W-A SKI6P46948 246 aaPredicted RBP2.9□□□□□ -1.95
YNL054W-AYNL054W-A YNL140CP53910 189 aa2.9□□□□□ -1.95
YNL054W-AYNL054W-A YLR460CP54007 376 aa2.9□□□□□ -1.95
YNL054W-AYNL054W-A DAD3P69850 94 aa2.9□□□□□ -1.95
YNL054W-AYNL054W-A MRPS8Q03799 155 aa2.9□□□□□ -1.95
YNL054W-AYNL054W-A YDL085C-AQ3E7B7 68 aaKnown RBP2.9□□□□□ -1.95
YNL054W-AYNL054W-A SNF4P12904 322 aa2.89□□□□□ -1.95
YNL054W-AYNL054W-A OCH1P31755 480 aa2.89□□□□□ -1.95
YNL054W-AYNL054W-A MAK5P38112 773 aaPredicted RBP2.89□□□□□ -1.95
YNL054W-AYNL054W-A UMP1P38293 148 aa2.89□□□□□ -1.95
YNL054W-AYNL054W-A GVP36P40531 326 aaKnown RBP2.89□□□□□ -1.95
YNL054W-AYNL054W-A ARO8P53090 500 aaKnown RBP2.89□□□□□ -1.95
YNL054W-AYNL054W-A YNL247WP53852 767 aaKnown RBP2.89□□□□□ -1.95
YNL054W-AYNL054W-A HNT1Q04344 158 aaKnown RBP2.89□□□□□ -1.95
YNL054W-AYNL054W-A YMR315WQ04869 349 aaKnown RBP2.89□□□□□ -1.95
YNL054W-AYNL054W-A SCL1P21243 252 aaKnown RBP2.88□□□□□ -1.95
YNL054W-AYNL054W-A PEX4P29340 183 aa2.88□□□□□ -1.95
YNL054W-AYNL054W-A TRR1P29509 319 aaKnown RBP2.88□□□□□ -1.95
YNL054W-AYNL054W-A ARC19P33204 171 aaKnown RBP2.88□□□□□ -1.95
YNL054W-AYNL054W-A VPS51P36116 164 aa2.88□□□□□ -1.95
YNL054W-AYNL054W-A YJR111CP47148 283 aaKnown RBP2.88□□□□□ -1.95
YNL054W-AYNL054W-A PRM15Q03262 622 aa2.88□□□□□ -1.95
YNL054W-AYNL054W-A YLR036CQ07986 203 aa2.88□□□□□ -1.95
YNL054W-AYNL054W-A CKS1P20486 150 aaKnown RBP2.87□□□□□ -1.95
YNL054W-AYNL054W-A MRPS28P21771 286 aa2.87□□□□□ -1.95
YNL054W-AYNL054W-A ARO7P32178 256 aa2.87□□□□□ -1.95
YNL054W-AYNL054W-A SRP14P38985 146 aa2.87□□□□□ -1.95
YNL054W-AYNL054W-A RPL33BP41056 107 aaKnown RBP2.87□□□□□ -1.95
YNL054W-AYNL054W-A MEU1Q07938 337 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
YNL054W-AYNL054W-A RAS2P01120 322 aaKnown RBP2.86□□□□□ -1.95
YNL054W-AYNL054W-A TRX3P25372 127 aa2.86□□□□□ -1.95
YNL054W-AYNL054W-A FCY21P40039 528 aa2.86□□□□□ -1.95
YNL054W-AYNL054W-A YER121WP40076 114 aa2.86□□□□□ -1.95
YNL054W-AYNL054W-A YKE4P40544 346 aa2.86□□□□□ -1.95
YNL054W-AYNL054W-A CIS3P47001 227 aa2.86□□□□□ -1.95
YNL054W-AYNL054W-A FSF1Q12029 327 aaKnown RBP2.86□□□□□ -1.95
YNL054W-AYNL054W-A YOR283WQ12040 230 aaKnown RBP2.86□□□□□ -1.95
YNL054W-AYNL054W-A AHC2P25649 128 aa2.85□□□□□ -1.95
YNL054W-AYNL054W-A MGT1P26188 188 aa2.85□□□□□ -1.95
YNL054W-AYNL054W-A PHO88P38264 188 aaPredicted RBP2.85□□□□□ -1.95
YNL054W-AYNL054W-A OPY1P38271 328 aa2.85□□□□□ -1.95
YNL054W-AYNL054W-A ERV15P38312 142 aa2.85□□□□□ -1.95
YNL054W-AYNL054W-A SER2P42941 309 aa2.85□□□□□ -1.95
YNL054W-AYNL054W-A DAN1P47178 298 aa2.85□□□□□ -1.95
YNL054W-AYNL054W-A YLR031WQ07978 186 aa2.85□□□□□ -1.95
YNL054W-AYNL054W-A YIL177CP40434 1758 aa2.85□□□□□ -1.95
YNL054W-AYNL054W-A YJL225CP40889 1758 aa2.85□□□□□ -1.95
YNL054W-AYNL054W-A SNC2P33328 115 aa2.84□□□□□ -1.96
YNL054W-AYNL054W-A SVP26P38869 228 aa2.84□□□□□ -1.96
YNL054W-AYNL054W-A NVJ1P38881 321 aa2.84□□□□□ -1.96
YNL054W-AYNL054W-A YER076CP40049 302 aa2.84□□□□□ -1.96
YNL054W-AYNL054W-A FMP32P43557 207 aa2.84□□□□□ -1.96
YNL054W-AYNL054W-A TDA4P47153 279 aa2.84□□□□□ -1.96
YNL054W-AYNL054W-A BOL2P53082 120 aa2.84□□□□□ -1.96
YNL054W-AYNL054W-A YDR274CP87283 123 aa2.84□□□□□ -1.96
YNL054W-AYNL054W-A RGM1Q00453 211 aa2.84□□□□□ -1.96
YNL054W-AYNL054W-A BRX1Q08235 291 aaKnown RBP2.84□□□□□ -1.96
YNL054W-AYNL054W-A KDX1P36005 433 aa2.83□□□□□ -1.96
YNL054W-AYNL054W-A YEA4P40004 342 aa2.83□□□□□ -1.96
YNL054W-AYNL054W-A TIR3P40552 269 aa2.83□□□□□ -1.96
YNL054W-AYNL054W-A YJL027CP47063 138 aaPredicted RBP2.83□□□□□ -1.96
YNL054W-AYNL054W-A YNR077CP53758 84 aa2.83□□□□□ -1.96
YNL054W-AYNL054W-A PGA1P53896 198 aa2.83□□□□□ -1.96
YNL054W-AYNL054W-A DGA1Q08650 418 aa2.83□□□□□ -1.96
YNL054W-AYNL054W-A ODC2Q99297 307 aa2.83□□□□□ -1.96
YNL054W-AYNL054W-A FES1P38260 290 aa2.82□□□□□ -1.96
YNL054W-AYNL054W-A YBR285WP38354 144 aa2.82□□□□□ -1.96
YNL054W-AYNL054W-A LSM4P40070 187 aaKnown RBP2.82□□□□□ -1.96
YNL054W-AYNL054W-A AIM34Q03673 198 aa2.82□□□□□ -1.96
YNL054W-AYNL054W-A NAT3Q06504 195 aa2.82□□□□□ -1.96
YNL054W-AYNL054W-A YLR050CQ12155 161 aaKnown RBP2.82□□□□□ -1.96
YNL054W-AYNL054W-A PDR18P53756 1333 aa2.81□□□□□ -1.96
YNL054W-AYNL054W-A DDI2P0CH63 225 aa2.81□□□□□ -1.96
YNL054W-AYNL054W-A DDI3P0CH64 225 aa2.81□□□□□ -1.96
YNL054W-AYNL054W-A YET1P35723 206 aa2.81□□□□□ -1.96
YNL054W-AYNL054W-A SHE2P36068 246 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
YNL054W-AYNL054W-A CPA1P07258 411 aaKnown RBP2.8□□□□□ -1.96
YNL054W-AYNL054W-A RPS24AP0CX31 135 aaKnown RBP2.8□□□□□ -1.96
YNL054W-AYNL054W-A RPS24BP0CX32 135 aaKnown RBP2.8□□□□□ -1.96
YNL054W-AYNL054W-A PAN3P36102 679 aaPredicted RBP2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 74.4 ms