RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W MPA43P53583 542 aaPredicted RBP4.49□□□□□ -1.69
LCP5YER127W ALG9P53868 555 aaKnown RBP4.49□□□□□ -1.69
LCP5YER127W RRN5Q02983 363 aa4.49□□□□□ -1.69
LCP5YER127W YPL039WQ03080 316 aa4.49□□□□□ -1.69
LCP5YER127W EHD3P28817 500 aa4.48□□□□□ -1.69
LCP5YER127W HEK2P38199 381 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
LCP5YER127W SEI1Q06058 285 aa4.48□□□□□ -1.69
LCP5YER127W YPS3Q12303 508 aa4.48□□□□□ -1.69
LCP5YER127W NOT5Q12514 560 aaPredicted RBP4.48□□□□□ -1.69
LCP5YER127W CDC39P25655 2108 aaKnown RBP4.48□□□□□ -1.69
LCP5YER127W SEC16P48415 2195 aaKnown RBP4.47□□□□□ -1.69
LCP5YER127W HSP150P32478 413 aa4.47□□□□□ -1.69
LCP5YER127W YBR032WP38223 100 aa4.47□□□□□ -1.69
LCP5YER127W BIG1P38813 335 aa4.47□□□□□ -1.69
LCP5YER127W YDR114CQ04597 100 aa4.47□□□□□ -1.69
LCP5YER127W PEX10Q05568 337 aa4.47□□□□□ -1.69
LCP5YER127W RAF1Q06891 181 aa4.47□□□□□ -1.69
LCP5YER127W NSL1Q12143 216 aa4.47□□□□□ -1.69
LCP5YER127W JLP1Q12358 412 aa4.47□□□□□ -1.69
LCP5YER127W SNF8Q12483 233 aa4.47□□□□□ -1.69
LCP5YER127W ARN2P38724 620 aa4.46□□□□□ -1.7
LCP5YER127W SUR2P38992 349 aa4.46□□□□□ -1.7
LCP5YER127W RGI1P40043 161 aaPredicted RBP4.46□□□□□ -1.7
LCP5YER127W COG3P40094 801 aa4.46□□□□□ -1.7
LCP5YER127W YPL119C-AQ3E751 87 aa4.46□□□□□ -1.7
LCP5YER127W RPS1BP23248 255 aaKnown RBP4.45□□□□□ -1.7
LCP5YER127W QRI5P32344 111 aa4.45□□□□□ -1.7
LCP5YER127W PTC1P35182 281 aa4.45□□□□□ -1.7
LCP5YER127W MRPL17P36528 281 aa4.45□□□□□ -1.7
LCP5YER127W MRPL39P36533 70 aa4.45□□□□□ -1.7
LCP5YER127W YGP1P38616 354 aaKnown RBP4.45□□□□□ -1.7
LCP5YER127W PRS2P38620 318 aaKnown RBP4.45□□□□□ -1.7
LCP5YER127W KRE28Q04431 385 aa4.45□□□□□ -1.7
LCP5YER127W YOL131WQ08270 108 aa4.45□□□□□ -1.7
LCP5YER127W MCP1Q12106 302 aa4.45□□□□□ -1.7
LCP5YER127W YRA1Q12159 226 aaKnown RBP4.45□□□□□ -1.7
LCP5YER127W MHF1Q3E835 90 aa4.45□□□□□ -1.7
LCP5YER127W YEL009C-AA0A023PZF2 135 aa4.44□□□□□ -1.7
LCP5YER127W MER1P16523 270 aa4.44□□□□□ -1.7
LCP5YER127W YGR201CP42936 225 aa4.44□□□□□ -1.7
LCP5YER127W BNA6P43619 295 aa4.44□□□□□ -1.7
LCP5YER127W SLX9P53251 210 aaPredicted RBP4.44□□□□□ -1.7
LCP5YER127W YLR173WQ06247 608 aa4.44□□□□□ -1.7
LCP5YER127W GRE1Q08969 168 aa4.44□□□□□ -1.7
LCP5YER127W THP2O13539 261 aaKnown RBP4.43□□□□□ -1.7
LCP5YER127W ATP7P30902 174 aa4.43□□□□□ -1.7
LCP5YER127W YHL037CP38733 133 aa4.43□□□□□ -1.7
LCP5YER127W YMR166CQ03829 368 aa4.43□□□□□ -1.7
LCP5YER127W SDO1Q07953 250 aaKnown RBP4.43□□□□□ -1.7
LCP5YER127W YOR029WQ12243 111 aa4.43□□□□□ -1.7
LCP5YER127W TIM22Q12328 207 aa4.43□□□□□ -1.7
LCP5YER127W BLM10P43583 2143 aa4.43□□□□□ -1.7
LCP5YER127W RHO1P06780 209 aaKnown RBP4.42□□□□□ -1.7
LCP5YER127W RPL35AP0CX84 120 aaKnown RBP4.42□□□□□ -1.7
LCP5YER127W RPL35BP0CX85 120 aaKnown RBP4.42□□□□□ -1.7
LCP5YER127W CCA1P21269 546 aa4.42□□□□□ -1.7
LCP5YER127W PRS4P38063 326 aaPredicted RBP4.42□□□□□ -1.7
LCP5YER127W YHR180WP38868 163 aa4.42□□□□□ -1.7
LCP5YER127W LSM4P40070 187 aaKnown RBP4.42□□□□□ -1.7
LCP5YER127W NIF3P53081 288 aa4.42□□□□□ -1.7
LCP5YER127W COS6P53344 381 aa4.42□□□□□ -1.7
LCP5YER127W SPO77Q06134 477 aa4.42□□□□□ -1.7
LCP5YER127W IRC19Q07843 230 aa4.42□□□□□ -1.7
LCP5YER127W BRX1Q08235 291 aaKnown RBP4.42□□□□□ -1.7
LCP5YER127W YDL180WQ12301 547 aa4.42□□□□□ -1.7
LCP5YER127W YBL112CQ3E7Y4 105 aa4.42□□□□□ -1.7
LCP5YER127W ISD11Q6Q560 94 aa4.42□□□□□ -1.7
LCP5YER127W MDH2P22133 377 aa4.41□□□□□ -1.7
LCP5YER127W CDC10P25342 322 aaKnown RBP4.41□□□□□ -1.7
LCP5YER127W ASF2P32448 525 aaPredicted RBP4.41□□□□□ -1.7
LCP5YER127W NUF2P33895 451 aa4.41□□□□□ -1.7
LCP5YER127W PRE6P40303 254 aaKnown RBP4.41□□□□□ -1.7
LCP5YER127W GGA1Q06336 557 aa4.41□□□□□ -1.7
LCP5YER127W OST3P48439 350 aa4.4□□□□□ -1.71
LCP5YER127W NIP7Q08962 181 aaKnown RBP4.4□□□□□ -1.71
LCP5YER127W RFM1Q12192 310 aa4.4□□□□□ -1.71
LCP5YER127W MED4Q12343 284 aa4.4□□□□□ -1.71
LCP5YER127W GEP5Q12393 293 aa4.4□□□□□ -1.71
LCP5YER127W YKL018C-AQ3E7A7 99 aa4.4□□□□□ -1.71
LCP5YER127W ERD2P18414 219 aa4.39□□□□□ -1.71
LCP5YER127W JEN1P36035 616 aa4.39□□□□□ -1.71
LCP5YER127W NUP57P48837 541 aa4.39□□□□□ -1.71
LCP5YER127W YGL088WP53151 121 aa4.39□□□□□ -1.71
LCP5YER127W FMN1Q03778 218 aa4.39□□□□□ -1.71
LCP5YER127W DYN3Q04949 312 aa4.39□□□□□ -1.71
LCP5YER127W YKL068W-AQ3E826 78 aa4.39□□□□□ -1.71
LCP5YER127W SCO1P23833 295 aa4.38□□□□□ -1.71
LCP5YER127W YBR220CP38318 560 aa4.38□□□□□ -1.71
LCP5YER127W SPO73P40031 143 aa4.38□□□□□ -1.71
LCP5YER127W RFC4P40339 323 aaKnown RBP4.38□□□□□ -1.71
LCP5YER127W YFR054CP43622 192 aa4.38□□□□□ -1.71
LCP5YER127W YJL144WP47009 104 aa4.38□□□□□ -1.71
LCP5YER127W YPR147CQ06522 304 aaKnown RBP4.38□□□□□ -1.71
LCP5YER127W HSP30P25619 332 aa4.37□□□□□ -1.71
LCP5YER127W LHP1P33399 275 aaKnown RBP4.37□□□□□ -1.71
LCP5YER127W MSN4P33749 630 aa4.37□□□□□ -1.71
LCP5YER127W SMB1P40018 196 aaKnown RBP4.37□□□□□ -1.71
LCP5YER127W SBH2P52871 88 aa4.37□□□□□ -1.71
LCP5YER127W MPC1P53157 130 aaKnown RBP4.37□□□□□ -1.71
LCP5YER127W AAH1P53909 347 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms