RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	CPD1	P53314	239 aa		1.28	□□□□□ -2.2
DOT6	YER088C	YMR209C	Q03648	457 aa		1.28	□□□□□ -2.2
DOT6	YER088C	YPR202W	Q08993	238 aa		1.28	□□□□□ -2.2
DOT6	YER088C	PSF1	Q12488	208 aa		1.28	□□□□□ -2.2
DOT6	YER088C	YAL064W-B	O13512	126 aa		1.28	□□□□□ -2.2
DOT6	YER088C	RHO1	P06780	209 aa	Known RBP	1.28	□□□□□ -2.2
DOT6	YER088C	RPO26	P20435	155 aa		1.28	□□□□□ -2.2
DOT6	YER088C	SCO1	P23833	295 aa		1.28	□□□□□ -2.2
DOT6	YER088C	RAD51	P25454	400 aa		1.28	□□□□□ -2.2
DOT6	YER088C	YCR016W	P25617	290 aa	Known RBP	1.28	□□□□□ -2.2
DOT6	YER088C	YCR090C	P25654	182 aa	Known RBP	1.28	□□□□□ -2.2
DOT6	YER088C	YKR032W	P36127	104 aa		1.28	□□□□□ -2.2
DOT6	YER088C	YCR087C-A	P37263	153 aa		1.28	□□□□□ -2.2
DOT6	YER088C	NSG1	P38837	291 aa		1.28	□□□□□ -2.2
DOT6	YER088C	AST2	P39945	430 aa	Known RBP	1.28	□□□□□ -2.2
DOT6	YER088C	DDI1	P40087	428 aa		1.28	□□□□□ -2.2
DOT6	YER088C	COA1	P40452	197 aa		1.28	□□□□□ -2.2
DOT6	YER088C	GCN20	P43535	752 aa	Known RBP	1.28	□□□□□ -2.2
DOT6	YER088C	RPS12	P48589	143 aa	Known RBP	1.28	□□□□□ -2.2
DOT6	YER088C	EFM5	P53200	248 aa	Known RBP	1.28	□□□□□ -2.2
DOT6	YER088C	RSM27	P53305	110 aa		1.28	□□□□□ -2.2
DOT6	YER088C	YNL140C	P53910	189 aa		1.28	□□□□□ -2.2
DOT6	YER088C	SWP1	Q02795	286 aa		1.28	□□□□□ -2.2
DOT6	YER088C	SRL4	Q03085	281 aa		1.28	□□□□□ -2.2
DOT6	YER088C	HPT1	Q04178	221 aa	Known RBP	1.28	□□□□□ -2.2
DOT6	YER088C	YOR268C	Q08734	132 aa		1.28	□□□□□ -2.2
DOT6	YER088C	YDL180W	Q12301	547 aa		1.28	□□□□□ -2.2
DOT6	YER088C	RTR2	Q12378	196 aa		1.28	□□□□□ -2.2
DOT6	YER088C	YMR030W-A	Q3E760	96 aa		1.28	□□□□□ -2.2
DOT6	YER088C	COX2	P00410	251 aa		1.27	□□□□□ -2.21
DOT6	YER088C	APA2	P22108	325 aa		1.27	□□□□□ -2.21
DOT6	YER088C	MDH2	P22133	377 aa		1.27	□□□□□ -2.21
DOT6	YER088C	RPS5	P26783	225 aa	Known RBP	1.27	□□□□□ -2.21
DOT6	YER088C	YAR1	P46683	200 aa		1.27	□□□□□ -2.21
DOT6	YER088C	CAB4	P53332	305 aa		1.27	□□□□□ -2.21
DOT6	YER088C	SSU72	P53538	206 aa	Predicted RBP	1.27	□□□□□ -2.21
DOT6	YER088C	YMR166C	Q03829	368 aa		1.27	□□□□□ -2.21
DOT6	YER088C	YMR114C	Q04471	368 aa	Known RBP	1.27	□□□□□ -2.21
DOT6	YER088C	CTR3	Q06686	241 aa		1.27	□□□□□ -2.21
DOT6	YER088C	PAM18	Q07914	168 aa		1.27	□□□□□ -2.21
DOT6	YER088C	YPL247C	Q12523	523 aa		1.27	□□□□□ -2.21
DOT6	YER088C	POF1	P25576	258 aa		1.27	□□□□□ -2.21
DOT6	YER088C	PEX3	P28795	441 aa		1.27	□□□□□ -2.21
DOT6	YER088C	ERG2	P32352	222 aa		1.27	□□□□□ -2.21
DOT6	YER088C	PRS4	P38063	326 aa	Predicted RBP	1.27	□□□□□ -2.21
DOT6	YER088C	YER085C	P40058	173 aa		1.27	□□□□□ -2.21
DOT6	YER088C	YRB1	P41920	201 aa	Known RBP	1.27	□□□□□ -2.21
DOT6	YER088C	CGR1	P53188	120 aa		1.27	□□□□□ -2.21
DOT6	YER088C	SYF2	P53277	215 aa	Predicted RBP	1.27	□□□□□ -2.21
DOT6	YER088C	YNL046W	P53956	172 aa		1.27	□□□□□ -2.21
DOT6	YER088C	PET191	Q02772	108 aa		1.27	□□□□□ -2.21
DOT6	YER088C	OST6	Q03723	332 aa		1.27	□□□□□ -2.21
DOT6	YER088C	SFH1	Q06168	426 aa		1.27	□□□□□ -2.21
DOT6	YER088C	MCP1	Q12106	302 aa		1.27	□□□□□ -2.21
DOT6	YER088C	MHF1	Q3E835	90 aa		1.27	□□□□□ -2.21
DOT6	YER088C	CMD1	P06787	147 aa	Known RBP	1.26	□□□□□ -2.21
DOT6	YER088C	DPM1	P14020	267 aa	Known RBP	1.26	□□□□□ -2.21
DOT6	YER088C	CBF1	P17106	351 aa		1.26	□□□□□ -2.21
DOT6	YER088C	SSO1	P32867	290 aa		1.26	□□□□□ -2.21
DOT6	YER088C	FIG1	P38224	298 aa		1.26	□□□□□ -2.21
DOT6	YER088C	PHO89	P38361	574 aa		1.26	□□□□□ -2.21
DOT6	YER088C	BIG1	P38813	335 aa		1.26	□□□□□ -2.21
DOT6	YER088C	COG3	P40094	801 aa		1.26	□□□□□ -2.21
DOT6	YER088C	YJR012C	P47087	207 aa		1.26	□□□□□ -2.21
DOT6	YER088C	YJR146W	P47174	117 aa		1.26	□□□□□ -2.21
DOT6	YER088C	SIP18	P50263	79 aa		1.26	□□□□□ -2.21
DOT6	YER088C	TIM21	P53220	239 aa		1.26	□□□□□ -2.21
DOT6	YER088C	SED1	Q01589	338 aa		1.26	□□□□□ -2.21
DOT6	YER088C	KRE28	Q04431	385 aa		1.26	□□□□□ -2.21
DOT6	YER088C	YDR124W	Q04608	324 aa		1.26	□□□□□ -2.21
DOT6	YER088C	RIM9	Q04734	239 aa		1.26	□□□□□ -2.21
DOT6	YER088C	SEC10	Q06245	871 aa		1.26	□□□□□ -2.21
DOT6	YER088C	SDO1	Q07953	250 aa	Known RBP	1.26	□□□□□ -2.21
DOT6	YER088C	NIP7	Q08962	181 aa	Known RBP	1.26	□□□□□ -2.21
DOT6	YER088C	YOR214C	Q12282	236 aa		1.26	□□□□□ -2.21
DOT6	YER088C	YGR035W-A	Q45U48	73 aa		1.26	□□□□□ -2.21
DOT6	YER088C	RPL26A	P05743	127 aa	Known RBP	1.25	□□□□□ -2.21
DOT6	YER088C	NMT1	P14743	455 aa		1.25	□□□□□ -2.21
DOT6	YER088C	RNA15	P25299	296 aa	Predicted RBP	1.25	□□□□□ -2.21
DOT6	YER088C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	1.25	□□□□□ -2.21	not detected
DOT6	YER088C	VMA11	P32842	164 aa		1.25	□□□□□ -2.21
DOT6	YER088C	PRS2	P38620	318 aa	Known RBP	1.25	□□□□□ -2.21
DOT6	YER088C	RFC4	P40339	323 aa	Known RBP	1.25	□□□□□ -2.21
DOT6	YER088C	RPL26B	P53221	127 aa	Known RBP	1.25	□□□□□ -2.21
DOT6	YER088C	GTR2	P53290	341 aa		1.25	□□□□□ -2.21
DOT6	YER088C	RCF2	P53721	224 aa		1.25	□□□□□ -2.21
DOT6	YER088C	SLM2	P53955	656 aa		1.25	□□□□□ -2.21
DOT6	YER088C	RGM1	Q00453	211 aa		1.25	□□□□□ -2.21
DOT6	YER088C	RCE1	Q03530	315 aa		1.25	□□□□□ -2.21
DOT6	YER088C	CSN9	Q03981	162 aa		1.25	□□□□□ -2.21
DOT6	YER088C	RIO1	Q12196	484 aa	Known RBP	1.25	□□□□□ -2.21
DOT6	YER088C	YOR029W	Q12243	111 aa		1.25	□□□□□ -2.21
DOT6	YER088C	SMT3	Q12306	101 aa	Known RBP	1.25	□□□□□ -2.21
DOT6	YER088C	ATG31	Q12421	196 aa		1.25	□□□□□ -2.21
DOT6	YER088C	RPL35A	P0CX84	120 aa	Known RBP	1.25	□□□□□ -2.21
DOT6	YER088C	RPL35B	P0CX85	120 aa	Known RBP	1.25	□□□□□ -2.21
DOT6	YER088C	RPL24B	P24000	155 aa	Known RBP	1.25	□□□□□ -2.21
DOT6	YER088C	PPA2	P28239	310 aa		1.25	□□□□□ -2.21
DOT6	YER088C	GDH2	P33327	1092 aa	Known RBP	1.25	□□□□□ -2.21
DOT6	YER088C	ETR1	P38071	380 aa		1.25	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 109 ms