RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C MEI4P29467 408 aa1.39□□□□□ -2.19
RPB5YBR154C MDH3P32419 343 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
RPB5YBR154C ECM4P36156 370 aa1.39□□□□□ -2.19
RPB5YBR154C MRPL17P36528 281 aa1.39□□□□□ -2.19
RPB5YBR154C GLE2P40066 365 aa1.39□□□□□ -2.19
RPB5YBR154C SNO1Q03144 224 aa1.39□□□□□ -2.19
RPB5YBR154C FUS2Q05670 677 aa1.39□□□□□ -2.19
RPB5YBR154C GRE1Q08969 168 aa1.39□□□□□ -2.19
RPB5YBR154C FKS1P38631 1876 aaKnown RBP1.39□□□□□ -2.19
RPB5YBR154C TIM9O74700 87 aa1.38□□□□□ -2.19
RPB5YBR154C PET9P18239 318 aaKnown RBP1.38□□□□□ -2.19
RPB5YBR154C MRPS28P21771 286 aa1.38□□□□□ -2.19
RPB5YBR154C TRX3P25372 127 aa1.38□□□□□ -2.19
RPB5YBR154C RAD51P25454 400 aa1.38□□□□□ -2.19
RPB5YBR154C TRR1P29509 319 aaKnown RBP1.38□□□□□ -2.19
RPB5YBR154C YOR062CP36025 268 aa1.38□□□□□ -2.19
RPB5YBR154C UMP1P38293 148 aa1.38□□□□□ -2.19
RPB5YBR154C PGD1P40356 397 aa1.38□□□□□ -2.19
RPB5YBR154C ICE2P40499 491 aa1.38□□□□□ -2.19
RPB5YBR154C JAC1P53193 184 aa1.38□□□□□ -2.19
RPB5YBR154C YIP3P53633 176 aa1.38□□□□□ -2.19
RPB5YBR154C DAD3P69850 94 aa1.38□□□□□ -2.19
RPB5YBR154C HNT1Q04344 158 aaKnown RBP1.38□□□□□ -2.19
RPB5YBR154C SPG3Q04398 127 aaPredicted RBP1.38□□□□□ -2.19
RPB5YBR154C GRX8Q05926 109 aa1.38□□□□□ -2.19
RPB5YBR154C YLR031WQ07978 186 aa1.38□□□□□ -2.19
RPB5YBR154C ATO3Q12359 275 aa1.38□□□□□ -2.19
RPB5YBR154C ATP15P21306 62 aa1.37□□□□□ -2.19
RPB5YBR154C MGT1P26188 188 aa1.37□□□□□ -2.19
RPB5YBR154C PEX4P29340 183 aa1.37□□□□□ -2.19
RPB5YBR154C ARC19P33204 171 aaKnown RBP1.37□□□□□ -2.19
RPB5YBR154C SNC2P33328 115 aa1.37□□□□□ -2.19
RPB5YBR154C ERV15P38312 142 aa1.37□□□□□ -2.19
RPB5YBR154C SRP14P38985 146 aa1.37□□□□□ -2.19
RPB5YBR154C GVP36P40531 326 aaKnown RBP1.37□□□□□ -2.19
RPB5YBR154C YKE4P40544 346 aa1.37□□□□□ -2.19
RPB5YBR154C FMP32P43557 207 aa1.37□□□□□ -2.19
RPB5YBR154C SKI6P46948 246 aaPredicted RBP1.37□□□□□ -2.19
RPB5YBR154C CIS3P47001 227 aa1.37□□□□□ -2.19
RPB5YBR154C ARP3P47117 449 aaKnown RBP1.37□□□□□ -2.19
RPB5YBR154C ARO8P53090 500 aaKnown RBP1.37□□□□□ -2.19
RPB5YBR154C YNR062CP53748 327 aa1.37□□□□□ -2.19
RPB5YBR154C YNL247WP53852 767 aaKnown RBP1.37□□□□□ -2.19
RPB5YBR154C YNL140CP53910 189 aa1.37□□□□□ -2.19
RPB5YBR154C YLR460CP54007 376 aa1.37□□□□□ -2.19
RPB5YBR154C CGI121Q03705 181 aaKnown RBP1.37□□□□□ -2.19
RPB5YBR154C MRPS8Q03799 155 aa1.37□□□□□ -2.19
RPB5YBR154C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
RPB5YBR154C SCL1P21243 252 aaKnown RBP1.36□□□□□ -2.19
RPB5YBR154C YCR090CP25654 182 aaKnown RBP1.36□□□□□ -2.19
RPB5YBR154C OCH1P31755 480 aa1.36□□□□□ -2.19
RPB5YBR154C RME1P32338 300 aaKnown RBP1.36□□□□□ -2.19
RPB5YBR154C CLG1P35190 452 aa1.36□□□□□ -2.19
RPB5YBR154C YKR041WP36134 250 aa1.36□□□□□ -2.19
RPB5YBR154C MAK5P38112 773 aaPredicted RBP1.36□□□□□ -2.19
RPB5YBR154C FMP23P38231 175 aa1.36□□□□□ -2.19
RPB5YBR154C PHO88P38264 188 aaPredicted RBP1.36□□□□□ -2.19
RPB5YBR154C AIM2P39721 246 aa1.36□□□□□ -2.19
RPB5YBR154C RPL33BP41056 107 aaKnown RBP1.36□□□□□ -2.19
RPB5YBR154C DOC1P53068 250 aa1.36□□□□□ -2.19
RPB5YBR154C YMR315WQ04869 349 aaKnown RBP1.36□□□□□ -2.19
RPB5YBR154C SMD2Q06217 110 aaKnown RBP1.36□□□□□ -2.19
RPB5YBR154C AHC2P25649 128 aa1.35□□□□□ -2.19
RPB5YBR154C ARO7P32178 256 aa1.35□□□□□ -2.19
RPB5YBR154C YET1P35723 206 aa1.35□□□□□ -2.19
RPB5YBR154C FES1P38260 290 aa1.35□□□□□ -2.19
RPB5YBR154C OPY1P38271 328 aa1.35□□□□□ -2.19
RPB5YBR154C YBR285WP38354 144 aa1.35□□□□□ -2.19
RPB5YBR154C SVP26P38869 228 aa1.35□□□□□ -2.19
RPB5YBR154C NVJ1P38881 321 aa1.35□□□□□ -2.19
RPB5YBR154C LSM4P40070 187 aaKnown RBP1.35□□□□□ -2.19
RPB5YBR154C TIR3P40552 269 aa1.35□□□□□ -2.19
RPB5YBR154C SER2P42941 309 aa1.35□□□□□ -2.19
RPB5YBR154C TMA22P47089 198 aaPredicted RBP1.35□□□□□ -2.19
RPB5YBR154C YJR111CP47148 283 aaKnown RBP1.35□□□□□ -2.19
RPB5YBR154C TDA4P47153 279 aa1.35□□□□□ -2.19
RPB5YBR154C ERG25P53045 309 aa1.35□□□□□ -2.19
RPB5YBR154C PGA1P53896 198 aa1.35□□□□□ -2.19
RPB5YBR154C YDR274CP87283 123 aa1.35□□□□□ -2.19
RPB5YBR154C AIM34Q03673 198 aa1.35□□□□□ -2.19
RPB5YBR154C DYN3Q04949 312 aa1.35□□□□□ -2.19
RPB5YBR154C DGA1Q08650 418 aa1.35□□□□□ -2.19
RPB5YBR154C FSF1Q12029 327 aaKnown RBP1.35□□□□□ -2.19
RPB5YBR154C ODC2Q99297 307 aa1.35□□□□□ -2.19
RPB5YBR154C YIL177CP40434 1758 aa1.34□□□□□ -2.19
RPB5YBR154C YJL225CP40889 1758 aa1.34□□□□□ -2.19
RPB5YBR154C RPS24AP0CX31 135 aaKnown RBP1.34□□□□□ -2.19
RPB5YBR154C RPS24BP0CX32 135 aaKnown RBP1.34□□□□□ -2.19
RPB5YBR154C SEC14P24280 304 aaKnown RBP1.34□□□□□ -2.19
RPB5YBR154C SHE2P36068 246 aaKnown RBP RIP-Chip data1.34□□□□□ -2.19not detected
RPB5YBR154C PAN3P36102 679 aaPredicted RBP1.34□□□□□ -2.19
RPB5YBR154C YEA4P40004 342 aa1.34□□□□□ -2.19
RPB5YBR154C YER076CP40049 302 aa1.34□□□□□ -2.19
RPB5YBR154C YER121WP40076 114 aa1.34□□□□□ -2.19
RPB5YBR154C BOL2P53082 120 aa1.34□□□□□ -2.19
RPB5YBR154C NUP49Q02199 472 aa1.34□□□□□ -2.19
RPB5YBR154C HPT1Q04178 221 aaKnown RBP1.34□□□□□ -2.19
RPB5YBR154C SHH4Q06236 168 aa1.34□□□□□ -2.19
RPB5YBR154C BRX1Q08235 291 aaKnown RBP1.34□□□□□ -2.19
RPB5YBR154C YLR050CQ12155 161 aaKnown RBP1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 55.3 ms