RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C MRP7P12687 371 aa10.01□□□□□ -0.81
LSP1YPL004C SIT4P20604 311 aa10.01□□□□□ -0.81
LSP1YPL004C ERO1Q03103 563 aa10.01□□□□□ -0.81
LSP1YPL004C RVB2Q12464 471 aaKnown RBP10.01□□□□□ -0.81
LSP1YPL004C SMY1P32364 656 aaKnown RBP10□□□□□ -0.81
LSP1YPL004C PRS1P32895 427 aaKnown RBP10□□□□□ -0.81
LSP1YPL004C IRC3Q06683 689 aa10□□□□□ -0.81
LSP1YPL004C SET1P38827 1080 aaKnown RBP9.99□□□□□ -0.81
LSP1YPL004C NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.99□□□□□ -0.81not detected
LSP1YPL004C SYF1Q04048 859 aaPredicted RBP9.99□□□□□ -0.81
LSP1YPL004C MAK21Q12176 1025 aaKnown RBP9.99□□□□□ -0.81
LSP1YPL004C NSR1P27476 414 aaKnown RBP RIP-Chip data9.98□□□□□ -0.81not detected
LSP1YPL004C AAD16Q02895 342 aa9.98□□□□□ -0.81
LSP1YPL004C NUP133P36161 1157 aa9.97□□□□□ -0.81
LSP1YPL004C UBP16Q02863 499 aa9.97□□□□□ -0.81
LSP1YPL004C PKH1Q03407 766 aa9.97□□□□□ -0.81
LSP1YPL004C YPP1P46951 817 aa9.96□□□□□ -0.82
LSP1YPL004C FCP1Q03254 732 aa9.96□□□□□ -0.82
LSP1YPL004C CAF20P12962 161 aaKnown RBP9.95□□□□□ -0.82
LSP1YPL004C YGR122WP53272 402 aa9.95□□□□□ -0.82
LSP1YPL004C RPS9BP05755 195 aaKnown RBP9.94□□□□□ -0.82
LSP1YPL004C FRD1P32614 470 aaKnown RBP9.94□□□□□ -0.82
LSP1YPL004C ITC1P53125 1264 aa9.94□□□□□ -0.82
LSP1YPL004C RPS19AP07280 144 aaKnown RBP9.93□□□□□ -0.82
LSP1YPL004C RPS19BP07281 144 aaPredicted RBP9.93□□□□□ -0.82
LSP1YPL004C NOP8Q08287 484 aaPredicted RBP9.93□□□□□ -0.82
LSP1YPL004C SAC3P46674 1301 aa9.92□□□□□ -0.82
LSP1YPL004C RAD24P32641 659 aa9.92□□□□□ -0.82
LSP1YPL004C YIL092WP40497 633 aa9.92□□□□□ -0.82
LSP1YPL004C FAS2P19097 1887 aaKnown RBP9.91□□□□□ -0.82
LSP1YPL004C HKR1P41809 1802 aa9.91□□□□□ -0.82
LSP1YPL004C ICL1P28240 557 aaPredicted RBP9.91□□□□□ -0.82
LSP1YPL004C SWC3P31376 625 aa9.91□□□□□ -0.82
LSP1YPL004C YKU70P32807 602 aa9.91□□□□□ -0.82
LSP1YPL004C RPN1P38764 993 aaKnown RBP9.91□□□□□ -0.82
LSP1YPL004C UBP12P39538 1254 aa9.91□□□□□ -0.82
LSP1YPL004C MTC5Q03897 1148 aa9.91□□□□□ -0.82
LSP1YPL004C SAS4Q04003 481 aa9.91□□□□□ -0.82
LSP1YPL004C CSI1Q04368 295 aa9.91□□□□□ -0.82
LSP1YPL004C GRX6Q12438 231 aa9.91□□□□□ -0.82
LSP1YPL004C SHC1P39000 512 aa9.9□□□□□ -0.82
LSP1YPL004C BOI2P39969 1040 aa9.9□□□□□ -0.82
LSP1YPL004C FPK1P53739 893 aa9.9□□□□□ -0.82
LSP1YPL004C SQS1P53866 767 aaKnown RBP9.9□□□□□ -0.82
LSP1YPL004C PSH1Q12161 406 aa9.9□□□□□ -0.82
LSP1YPL004C RAD2P07276 1031 aa9.88□□□□□ -0.83
LSP1YPL004C DAL5P15365 543 aa9.88□□□□□ -0.83
LSP1YPL004C ICP55P40051 511 aa9.88□□□□□ -0.83
LSP1YPL004C DPH6Q12429 685 aa9.88□□□□□ -0.83
LSP1YPL004C SUP35P05453 685 aaKnown RBP9.87□□□□□ -0.83
LSP1YPL004C RET1P22276 1149 aaKnown RBP9.87□□□□□ -0.83
LSP1YPL004C TOP1P04786 769 aa9.86□□□□□ -0.83
LSP1YPL004C KRE2P27809 442 aa9.86□□□□□ -0.83
LSP1YPL004C ATG20Q07528 640 aa9.86□□□□□ -0.83
LSP1YPL004C HXT10P43581 546 aa9.85□□□□□ -0.83
LSP1YPL004C TRP5P00931 707 aaKnown RBP9.84□□□□□ -0.83
LSP1YPL004C DPL1Q05567 589 aa9.84□□□□□ -0.83
LSP1YPL004C MGM1P32266 881 aa9.83□□□□□ -0.84
LSP1YPL004C DUR1,2P32528 1835 aaKnown RBP9.82□□□□□ -0.84
LSP1YPL004C NGR1P32831 672 aaKnown RBP9.82□□□□□ -0.84
LSP1YPL004C YNG2P38806 282 aaKnown RBP9.82□□□□□ -0.84
LSP1YPL004C SPL2P38839 148 aa9.82□□□□□ -0.84
LSP1YPL004C HGH1P48362 394 aaKnown RBP9.82□□□□□ -0.84
LSP1YPL004C UBX2Q04228 584 aa9.82□□□□□ -0.84
LSP1YPL004C THI3Q07471 609 aa9.82□□□□□ -0.84
LSP1YPL004C SNU66Q12420 587 aaPredicted RBP9.82□□□□□ -0.84
LSP1YPL004C ADR1P07248 1323 aa9.82□□□□□ -0.84
LSP1YPL004C GCD7P32502 381 aaPredicted RBP9.81□□□□□ -0.84
LSP1YPL004C SET4P42948 560 aa9.81□□□□□ -0.84
LSP1YPL004C SLI15P38283 698 aa9.8□□□□□ -0.84
LSP1YPL004C RPT4P53549 437 aaKnown RBP9.8□□□□□ -0.84
LSP1YPL004C MSM1P22438 575 aa9.79□□□□□ -0.84
LSP1YPL004C NUG1P40010 520 aaKnown RBP9.79□□□□□ -0.84
LSP1YPL004C SRC1Q03707 834 aa9.79□□□□□ -0.84
LSP1YPL004C FIG2P25653 1609 aa9.78□□□□□ -0.84
LSP1YPL004C SSF1P38789 453 aaPredicted RBP9.78□□□□□ -0.84
LSP1YPL004C FUN12P39730 1002 aaKnown RBP9.78□□□□□ -0.84
LSP1YPL004C TIF4632P39936 914 aaKnown RBP9.78□□□□□ -0.84
LSP1YPL004C POL32P47110 350 aa9.78□□□□□ -0.84
LSP1YPL004C SPO1P53541 631 aa9.78□□□□□ -0.84
LSP1YPL004C YLR278CQ05854 1341 aa9.78□□□□□ -0.84
LSP1YPL004C RTG2P32608 588 aaKnown RBP9.77□□□□□ -0.85
LSP1YPL004C PEX21P50091 288 aa9.77□□□□□ -0.85
LSP1YPL004C PUS5Q06244 254 aa9.77□□□□□ -0.85
LSP1YPL004C GAS5Q08193 484 aa9.77□□□□□ -0.85
LSP1YPL004C GYP5Q12344 894 aa9.77□□□□□ -0.85
LSP1YPL004C TOM1Q03280 3268 aa9.76□□□□□ -0.85
LSP1YPL004C LCB1P25045 558 aaKnown RBP9.76□□□□□ -0.85
LSP1YPL004C PUF6Q04373 656 aaKnown RBP9.76□□□□□ -0.85
LSP1YPL004C POM152P39685 1337 aa9.76□□□□□ -0.85
LSP1YPL004C THS1P04801 734 aaKnown RBP9.75□□□□□ -0.85
LSP1YPL004C SEC18P18759 758 aaKnown RBP9.75□□□□□ -0.85
LSP1YPL004C GLC3P32775 704 aa9.75□□□□□ -0.85
LSP1YPL004C ILV3P39522 585 aaKnown RBP9.75□□□□□ -0.85
LSP1YPL004C IRC4Q03036 179 aa9.75□□□□□ -0.85
LSP1YPL004C RRG1Q12167 365 aaPredicted RBP9.75□□□□□ -0.85
LSP1YPL004C SSA4P22202 642 aaKnown RBP9.74□□□□□ -0.85
LSP1YPL004C PRP42Q03776 544 aaKnown RBP9.74□□□□□ -0.85
LSP1YPL004C AFG2P32794 780 aa9.73□□□□□ -0.85
LSP1YPL004C GLO3P38682 493 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms