RNA–Protein interactions for RNA: YOL004W

SIN3, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene SIN3, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIN3YOL004W YLL066CQ99208 1374 aa3.82□□□□□ -1.8
SIN3YOL004W MCM3P24279 971 aaKnown RBP3.82□□□□□ -1.8
SIN3YOL004W SPO71Q03868 1245 aa3.82□□□□□ -1.8
SIN3YOL004W DAP1Q12091 152 aa3.82□□□□□ -1.8
SIN3YOL004W TPS3P38426 1054 aaKnown RBP3.82□□□□□ -1.8
SIN3YOL004W YER158CP40095 573 aa3.81□□□□□ -1.8
SIN3YOL004W TRM44Q02648 567 aaKnown RBP3.81□□□□□ -1.8
SIN3YOL004W ULP1Q02724 621 aa3.81□□□□□ -1.8
SIN3YOL004W RRG1Q12167 365 aaPredicted RBP3.81□□□□□ -1.8
SIN3YOL004W FET4P40988 552 aa3.81□□□□□ -1.8
SIN3YOL004W YGR266WP53326 701 aa3.81□□□□□ -1.8
SIN3YOL004W LPD1P09624 499 aaKnown RBP3.81□□□□□ -1.8
SIN3YOL004W YJL007CP47080 104 aa3.81□□□□□ -1.8
SIN3YOL004W GIN4Q12263 1142 aa3.81□□□□□ -1.8
SIN3YOL004W YPR117WQ06116 2489 aa3.8□□□□□ -1.8
SIN3YOL004W BDF2Q07442 638 aa3.8□□□□□ -1.8
SIN3YOL004W TRP2P00899 507 aaKnown RBP3.8□□□□□ -1.8
SIN3YOL004W RPL40AP0CH08 128 aaKnown RBP3.8□□□□□ -1.8
SIN3YOL004W RPL40BP0CH09 128 aaKnown RBP3.8□□□□□ -1.8
SIN3YOL004W JHD1P40034 492 aa3.8□□□□□ -1.8
SIN3YOL004W YBP2P53169 641 aa3.8□□□□□ -1.8
SIN3YOL004W FOX2Q02207 900 aaKnown RBP3.8□□□□□ -1.8
SIN3YOL004W ACE2P21192 770 aa3.79□□□□□ -1.8
SIN3YOL004W COQ8P27697 501 aa3.79□□□□□ -1.8
SIN3YOL004W DRE2P36152 348 aa3.79□□□□□ -1.8
SIN3YOL004W YHR131CP38835 850 aa3.79□□□□□ -1.8
SIN3YOL004W XKS1P42826 600 aa3.79□□□□□ -1.8
SIN3YOL004W YFR016CP43597 1233 aaKnown RBP3.79□□□□□ -1.8
SIN3YOL004W YRF1-4O13559 1382 aa3.79□□□□□ -1.8
SIN3YOL004W BIO5P53744 561 aaKnown RBP3.79□□□□□ -1.8
SIN3YOL004W NMD3P38861 518 aaKnown RBP3.79□□□□□ -1.8
SIN3YOL004W POL3P15436 1097 aa3.79□□□□□ -1.8
SIN3YOL004W BI4P03879 638 aa3.78□□□□□ -1.8
SIN3YOL004W PTI1P39927 425 aaPredicted RBP3.78□□□□□ -1.8
SIN3YOL004W ADR1P07248 1323 aa3.78□□□□□ -1.8
SIN3YOL004W ERG7P38604 731 aa3.78□□□□□ -1.8
SIN3YOL004W ENV11P53246 860 aa3.78□□□□□ -1.8
SIN3YOL004W AIR2Q12476 344 aaKnown RBP3.78□□□□□ -1.8
SIN3YOL004W CHO2P05374 869 aaKnown RBP3.77□□□□□ -1.81
SIN3YOL004W RPO21P04050 1733 aaKnown RBP3.77□□□□□ -1.81
SIN3YOL004W SFB3P38810 929 aa3.77□□□□□ -1.81
SIN3YOL004W MXR1P40029 184 aa3.77□□□□□ -1.81
SIN3YOL004W GRE2Q12068 342 aaKnown RBP3.77□□□□□ -1.81
SIN3YOL004W YBR238CP38330 731 aaKnown RBP3.77□□□□□ -1.81
SIN3YOL004W RIM101P33400 625 aa3.77□□□□□ -1.81
SIN3YOL004W FUS1P11710 512 aa3.76□□□□□ -1.81
SIN3YOL004W DBP1P24784 617 aaKnown RBP3.76□□□□□ -1.81
SIN3YOL004W MMR1Q06324 491 aa3.76□□□□□ -1.81
SIN3YOL004W SDH5Q08230 162 aa3.76□□□□□ -1.81
SIN3YOL004W CSE4P36012 229 aa3.76□□□□□ -1.81
SIN3YOL004W ICL1P28240 557 aaPredicted RBP3.76□□□□□ -1.81
SIN3YOL004W SLD2P34252 453 aa3.76□□□□□ -1.81
SIN3YOL004W TY3B-IQ7LHG5 1498 aaKnown RBP3.76□□□□□ -1.81
SIN3YOL004W IMG2P25642 146 aaPredicted RBP3.75□□□□□ -1.81
SIN3YOL004W PCA1P38360 1216 aa3.75□□□□□ -1.81
SIN3YOL004W KRE5P22023 1365 aa3.75□□□□□ -1.81
SIN3YOL004W SWI6P09959 803 aa3.75□□□□□ -1.81
SIN3YOL004W SRS2P12954 1174 aa3.75□□□□□ -1.81
SIN3YOL004W KAR2P16474 682 aaKnown RBP3.75□□□□□ -1.81
SIN3YOL004W SIT4P20604 311 aa3.75□□□□□ -1.81
SIN3YOL004W MGA2P40578 1113 aa3.75□□□□□ -1.81
SIN3YOL004W CDC60P26637 1090 aaKnown RBP3.75□□□□□ -1.81
SIN3YOL004W MOT2P34909 587 aaKnown RBP3.75□□□□□ -1.81
SIN3YOL004W NET1P47035 1189 aa3.75□□□□□ -1.81
SIN3YOL004W TOS1P38288 455 aa3.74□□□□□ -1.81
SIN3YOL004W HUL5P53119 910 aa3.74□□□□□ -1.81
SIN3YOL004W SLM3Q12093 417 aa3.74□□□□□ -1.81
SIN3YOL004W TIM23P32897 222 aa3.74□□□□□ -1.81
SIN3YOL004W YJL070CP40361 888 aa3.74□□□□□ -1.81
SIN3YOL004W KGD2P19262 463 aaPredicted RBP3.73□□□□□ -1.81
SIN3YOL004W SNA3P14359 133 aa3.73□□□□□ -1.81
SIN3YOL004W OCT1P35999 772 aa3.73□□□□□ -1.81
SIN3YOL004W VPS70P47161 811 aa3.73□□□□□ -1.81
SIN3YOL004W ADE6P38972 1358 aaKnown RBP3.73□□□□□ -1.81
SIN3YOL004W ASH1P34233 588 aa3.73□□□□□ -1.81
SIN3YOL004W YNR061CP53747 219 aa3.73□□□□□ -1.81
SIN3YOL004W UIP5P36137 443 aa3.72□□□□□ -1.81
SIN3YOL004W RGD1P38339 666 aa3.72□□□□□ -1.81
SIN3YOL004W MTR4P47047 1073 aaKnown RBP3.72□□□□□ -1.81
SIN3YOL004W APL2P36000 726 aaPredicted RBP3.72□□□□□ -1.81
SIN3YOL004W MNL2Q12205 849 aa3.72□□□□□ -1.81
SIN3YOL004W SEC21P32074 935 aaKnown RBP3.72□□□□□ -1.81
SIN3YOL004W YML020WQ03722 664 aa3.72□□□□□ -1.81
SIN3YOL004W AFT1P22149 690 aa3.72□□□□□ -1.81
SIN3YOL004W TOM71P38825 639 aaKnown RBP3.72□□□□□ -1.81
SIN3YOL004W RMT2Q03305 412 aa3.72□□□□□ -1.81
SIN3YOL004W STE4P18851 423 aa3.71□□□□□ -1.81
SIN3YOL004W HCM1P25364 564 aa3.71□□□□□ -1.81
SIN3YOL004W ACK1Q07622 623 aaPredicted RBP3.71□□□□□ -1.81
SIN3YOL004W HPR1P17629 752 aaKnown RBP3.71□□□□□ -1.82
SIN3YOL004W DNM1P54861 757 aa3.71□□□□□ -1.82
SIN3YOL004W ESC2Q06340 456 aa3.71□□□□□ -1.82
SIN3YOL004W ESF1Q06344 628 aaKnown RBP3.71□□□□□ -1.82
SIN3YOL004W NOP53Q12080 455 aaKnown RBP3.71□□□□□ -1.82
SIN3YOL004W CBP1P07252 654 aa3.71□□□□□ -1.82
SIN3YOL004W KIN1P13185 1064 aa3.71□□□□□ -1.82
SIN3YOL004W YGR117CP53270 476 aa3.71□□□□□ -1.82
SIN3YOL004W CSL4P53859 292 aaPredicted RBP3.7□□□□□ -1.82
SIN3YOL004W YRF1-1P0CX20 1796 aa3.7□□□□□ -1.82
SIN3YOL004W YRF1-5P0CX21 1796 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms