RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	MRC1	P25588	1096 aa		8.02	□□□□□ -1.13
MSB3	YNL293W	YEL1	P34225	687 aa		8.02	□□□□□ -1.13
MSB3	YNL293W	SHC1	P39000	512 aa		8.02	□□□□□ -1.13
MSB3	YNL293W	BRR1	Q99177	341 aa	Predicted RBP	8.02	□□□□□ -1.13
MSB3	YNL293W	FAR1	P21268	830 aa		8.01	□□□□□ -1.13
MSB3	YNL293W	HSP104	P31539	908 aa	Known RBP	8.01	□□□□□ -1.13
MSB3	YNL293W	RPC37	P36121	282 aa		8.01	□□□□□ -1.13
MSB3	YNL293W	HOS2	P53096	452 aa	Predicted RBP	8.01	□□□□□ -1.13
MSB3	YNL293W	VTC3	Q02725	835 aa		8.01	□□□□□ -1.13
MSB3	YNL293W	GDE1	Q02979	1223 aa		8.01	□□□□□ -1.13
MSB3	YNL293W	HOT1	Q03213	719 aa		8.01	□□□□□ -1.13
MSB3	YNL293W	MRD1	Q06106	887 aa	Known RBP	8.01	□□□□□ -1.13
MSB3	YNL293W	AOS1	Q06624	347 aa		8.01	□□□□□ -1.13
MSB3	YNL293W	YDL144C	Q07589	356 aa		8.01	□□□□□ -1.13
MSB3	YNL293W	PSK2	Q08217	1101 aa		8.01	□□□□□ -1.13
MSB3	YNL293W	RPL17A	P05740	184 aa	Known RBP	8.01	□□□□□ -1.13
MSB3	YNL293W	CDC37	P06101	506 aa	Known RBP	8.01	□□□□□ -1.13
MSB3	YNL293W	YLF2	P38746	405 aa		8.01	□□□□□ -1.13
MSB3	YNL293W	YIR042C	P40586	236 aa		8.01	□□□□□ -1.13
MSB3	YNL293W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	8.01	□□□□□ -1.13	not detected
MSB3	YNL293W	GYP7	P48365	746 aa		8.01	□□□□□ -1.13
MSB3	YNL293W	BNI4	P53858	892 aa		8.01	□□□□□ -1.13
MSB3	YNL293W	BRE1	Q07457	700 aa	Known RBP	8.01	□□□□□ -1.13
MSB3	YNL293W	RTS3	P53289	263 aa		8	□□□□□ -1.13
MSB3	YNL293W	MEH1	Q02205	184 aa		8	□□□□□ -1.13
MSB3	YNL293W	NUP159	P40477	1460 aa		8	□□□□□ -1.13
MSB3	YNL293W	ROM2	P51862	1356 aa	Known RBP	8	□□□□□ -1.13
MSB3	YNL293W	EFM2	P38347	419 aa		7.99	□□□□□ -1.13
MSB3	YNL293W	RIA1	P53893	1110 aa		7.99	□□□□□ -1.13
MSB3	YNL293W	GCN2	P15442	1659 aa		7.99	□□□□□ -1.13
MSB3	YNL293W	MET5	P47169	1442 aa		7.99	□□□□□ -1.13
MSB3	YNL293W	ARD1	P07347	238 aa	Predicted RBP	7.99	□□□□□ -1.13
MSB3	YNL293W	CDC48	P25694	835 aa	Known RBP	7.99	□□□□□ -1.13
MSB3	YNL293W	RPN12	P32496	274 aa		7.99	□□□□□ -1.13
MSB3	YNL293W	SLD2	P34252	453 aa		7.99	□□□□□ -1.13
MSB3	YNL293W	ATG14	P38270	344 aa		7.99	□□□□□ -1.13
MSB3	YNL293W	IES2	P40154	320 aa		7.99	□□□□□ -1.13
MSB3	YNL293W	YFR006W	P43590	535 aa		7.99	□□□□□ -1.13
MSB3	YNL293W	PRP31	P49704	494 aa	Predicted RBP	7.99	□□□□□ -1.13
MSB3	YNL293W	BNI5	P53890	448 aa	Known RBP	7.99	□□□□□ -1.13
MSB3	YNL293W	GYL1	Q04322	720 aa		7.99	□□□□□ -1.13
MSB3	YNL293W	KRE28	Q04431	385 aa		7.99	□□□□□ -1.13
MSB3	YNL293W	BUD21	Q08492	214 aa	Predicted RBP	7.99	□□□□□ -1.13
MSB3	YNL293W	SRS2	P12954	1174 aa		7.98	□□□□□ -1.13
MSB3	YNL293W	SEC23	P15303	768 aa	Known RBP	7.98	□□□□□ -1.13
MSB3	YNL293W	BUD14	P27637	709 aa		7.98	□□□□□ -1.13
MSB3	YNL293W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	7.98	□□□□□ -1.13	not detected
MSB3	YNL293W	SSP1	P38871	571 aa		7.98	□□□□□ -1.13
MSB3	YNL293W	HEH2	Q03281	663 aa		7.98	□□□□□ -1.13
MSB3	YNL293W	WHI5	Q12416	295 aa		7.98	□□□□□ -1.13
MSB3	YNL293W	RPO31	P04051	1460 aa		7.98	□□□□□ -1.13
MSB3	YNL293W	PET123	P17558	318 aa		7.97	□□□□□ -1.13
MSB3	YNL293W	RME1	P32338	300 aa	Known RBP	7.97	□□□□□ -1.13
MSB3	YNL293W	KAR9	P32526	644 aa		7.97	□□□□□ -1.13
MSB3	YNL293W	MFT1	P33441	392 aa	Known RBP	7.97	□□□□□ -1.13
MSB3	YNL293W	TY4A-J	P47023	414 aa		7.97	□□□□□ -1.13
MSB3	YNL293W	AIM21	P40563	679 aa		7.97	□□□□□ -1.13
MSB3	YNL293W	HIR2	P32480	875 aa		7.96	□□□□□ -1.13
MSB3	YNL293W	UBP14	P38237	781 aa	Known RBP	7.96	□□□□□ -1.13
MSB3	YNL293W	RVS167	P39743	482 aa	Known RBP	7.96	□□□□□ -1.13
MSB3	YNL293W	MVP1	P40959	511 aa	Known RBP	7.96	□□□□□ -1.13
MSB3	YNL293W	CIR1	P42940	261 aa		7.96	□□□□□ -1.13
MSB3	YNL293W	DSL1	P53847	754 aa		7.96	□□□□□ -1.13
MSB3	YNL293W	TIM50	Q02776	476 aa		7.96	□□□□□ -1.13
MSB3	YNL293W	NOC3	Q07896	663 aa	Predicted RBP	7.96	□□□□□ -1.13
MSB3	YNL293W	IOC2	Q12072	812 aa		7.96	□□□□□ -1.13
MSB3	YNL293W	RUD3	Q12234	484 aa	Known RBP	7.96	□□□□□ -1.13
MSB3	YNL293W	CDC31	P06704	161 aa	Known RBP	7.95	□□□□□ -1.14
MSB3	YNL293W	TPD3	P31383	635 aa		7.95	□□□□□ -1.14
MSB3	YNL293W	YJR142W	P47173	342 aa		7.95	□□□□□ -1.14
MSB3	YNL293W	RTF1	P53064	558 aa		7.95	□□□□□ -1.14
MSB3	YNL293W	ERB1	Q04660	807 aa	Known RBP	7.95	□□□□□ -1.14
MSB3	YNL293W	RSC2	Q06488	889 aa		7.95	□□□□□ -1.14
MSB3	YNL293W	LAM6	Q08001	693 aa		7.95	□□□□□ -1.14
MSB3	YNL293W	SEC66	P33754	206 aa		7.95	□□□□□ -1.14
MSB3	YNL293W	MPE1	P35728	441 aa	Known RBP	7.95	□□□□□ -1.14
MSB3	YNL293W	RFC5	P38251	354 aa		7.95	□□□□□ -1.14
MSB3	YNL293W	SET2	P46995	733 aa	Known RBP	7.95	□□□□□ -1.14
MSB3	YNL293W	YGL082W	P53155	381 aa		7.95	□□□□□ -1.14
MSB3	YNL293W	LCB5	Q06147	687 aa	Known RBP	7.95	□□□□□ -1.14
MSB3	YNL293W	CHS5	Q12114	671 aa	Known RBP	7.95	□□□□□ -1.14
MSB3	YNL293W	PDR18	P53756	1333 aa		7.95	□□□□□ -1.14
MSB3	YNL293W	PDR5	P33302	1511 aa	Known RBP	7.95	□□□□□ -1.14
MSB3	YNL293W	CDC10	P25342	322 aa	Known RBP	7.94	□□□□□ -1.14
MSB3	YNL293W	MET4	P32389	672 aa		7.94	□□□□□ -1.14
MSB3	YNL293W	MNR2	P35724	969 aa		7.94	□□□□□ -1.14
MSB3	YNL293W	YCK3	P39962	524 aa		7.94	□□□□□ -1.14
MSB3	YNL293W	RRT14	P40470	206 aa		7.94	□□□□□ -1.14
MSB3	YNL293W	KRE33	P53914	1056 aa	Known RBP	7.94	□□□□□ -1.14
MSB3	YNL293W	YMR111C	Q04461	462 aa	Predicted RBP	7.94	□□□□□ -1.14
MSB3	YNL293W	TSR1	Q07381	788 aa	Known RBP	7.94	□□□□□ -1.14
MSB3	YNL293W	TFB4	Q12004	338 aa		7.94	□□□□□ -1.14
MSB3	YNL293W	SWR1	Q05471	1514 aa		7.94	□□□□□ -1.14
MSB3	YNL293W	SSK2	P53599	1579 aa		7.94	□□□□□ -1.14
MSB3	YNL293W	IQG1	Q12280	1495 aa		7.94	□□□□□ -1.14
MSB3	YNL293W	MSM1	P22438	575 aa		7.93	□□□□□ -1.14
MSB3	YNL293W	CSE1	P33307	960 aa		7.93	□□□□□ -1.14
MSB3	YNL293W	PTH2	P34222	208 aa		7.93	□□□□□ -1.14
MSB3	YNL293W	UBP13	P38187	747 aa		7.93	□□□□□ -1.14
MSB3	YNL293W	ORM1	P53224	222 aa		7.93	□□□□□ -1.14

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms