RNA–Protein interactions for RNA: YMR255W

GFD1, Transcript of Coiled-coiled protein of unknown function, yeastyeast

Gene GFD1, Length 567 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GFD1YMR255W POL1P13382 1468 aa8.61□□□□□ -1.03
GFD1YMR255W YPK9Q12697 1472 aa8.6□□□□□ -1.03
GFD1YMR255W STE6P12866 1290 aa8.6□□□□□ -1.03
GFD1YMR255W HST3P53687 447 aa8.6□□□□□ -1.03
GFD1YMR255W BDS1Q08347 646 aa8.6□□□□□ -1.03
GFD1YMR255W MMS22Q06164 1454 aa8.59□□□□□ -1.03
GFD1YMR255W UGA3P26370 528 aa8.59□□□□□ -1.03
GFD1YMR255W NTH2P35172 780 aa8.59□□□□□ -1.03
GFD1YMR255W YFL034WP43564 1073 aa8.59□□□□□ -1.03
GFD1YMR255W SPT2P06843 333 aaPredicted RBP8.58□□□□□ -1.04
GFD1YMR255W PEP1P32319 1579 aa8.57□□□□□ -1.04
GFD1YMR255W AFT1P22149 690 aa8.57□□□□□ -1.04
GFD1YMR255W YPL062WQ02781 134 aa8.57□□□□□ -1.04
GFD1YMR255W GAS4Q08271 471 aa8.57□□□□□ -1.04
GFD1YMR255W STU1P38198 1513 aa8.56□□□□□ -1.04
GFD1YMR255W SLX8P40072 274 aa8.56□□□□□ -1.04
GFD1YMR255W WTM2Q12206 467 aa8.56□□□□□ -1.04
GFD1YMR255W SWI5P08153 709 aa8.55□□□□□ -1.04
GFD1YMR255W RPS6AP0CX37 236 aaKnown RBP8.55□□□□□ -1.04
GFD1YMR255W RPS6BP0CX38 236 aaPredicted RBP8.55□□□□□ -1.04
GFD1YMR255W TBS1P38114 1094 aa8.55□□□□□ -1.04
GFD1YMR255W MSB3P48566 633 aaPredicted RBP8.54□□□□□ -1.04
GFD1YMR255W MDS3P53094 1487 aa8.53□□□□□ -1.04
GFD1YMR255W YTA7P40340 1379 aa8.52□□□□□ -1.05
GFD1YMR255W VAN1P23642 535 aa8.52□□□□□ -1.05
GFD1YMR255W CDC3P32457 520 aaKnown RBP8.52□□□□□ -1.05
GFD1YMR255W TPS3P38426 1054 aaKnown RBP8.52□□□□□ -1.05
GFD1YMR255W UTP7P40055 554 aaKnown RBP8.52□□□□□ -1.05
GFD1YMR255W SCC2Q04002 1493 aa8.51□□□□□ -1.05
GFD1YMR255W CYT1P07143 309 aa8.51□□□□□ -1.05
GFD1YMR255W YJR115WP47152 169 aa8.51□□□□□ -1.05
GFD1YMR255W RPP2BP02400 110 aaKnown RBP8.5□□□□□ -1.05
GFD1YMR255W DLD3P39976 496 aaKnown RBP8.5□□□□□ -1.05
GFD1YMR255W PUN1Q06991 263 aa8.5□□□□□ -1.05
GFD1YMR255W RTT106P40161 455 aa8.49□□□□□ -1.05
GFD1YMR255W CWC15Q03772 175 aaKnown RBP8.49□□□□□ -1.05
GFD1YMR255W PUF6Q04373 656 aaKnown RBP8.49□□□□□ -1.05
GFD1YMR255W RPO31P04051 1460 aa8.49□□□□□ -1.05
GFD1YMR255W AAD14P42884 376 aa8.48□□□□□ -1.05
GFD1YMR255W PTK2P47116 818 aaKnown RBP8.48□□□□□ -1.05
GFD1YMR255W SRF1Q12516 437 aa8.48□□□□□ -1.05
GFD1YMR255W YOR1P53049 1477 aa8.47□□□□□ -1.05
GFD1YMR255W ARG82P07250 355 aa8.47□□□□□ -1.05
GFD1YMR255W BPT1P14772 1559 aa8.47□□□□□ -1.05
GFD1YMR255W RKR1Q04781 1562 aa8.47□□□□□ -1.05
GFD1YMR255W DLD1P32891 587 aa8.46□□□□□ -1.06
GFD1YMR255W HAT1Q12341 374 aa8.46□□□□□ -1.06
GFD1YMR255W TRS33Q99394 268 aa8.46□□□□□ -1.06
GFD1YMR255W SUV3P32580 737 aa8.45□□□□□ -1.06
GFD1YMR255W BRE2P43132 505 aa8.45□□□□□ -1.06
GFD1YMR255W YML020WQ03722 664 aa8.45□□□□□ -1.06
GFD1YMR255W PNP1Q05788 311 aa8.45□□□□□ -1.06
GFD1YMR255W UBP1P25037 809 aa8.44□□□□□ -1.06
GFD1YMR255W SUM1P46676 1062 aa8.44□□□□□ -1.06
GFD1YMR255W ALD4P46367 519 aaKnown RBP8.43□□□□□ -1.06
GFD1YMR255W TOP2P06786 1428 aaKnown RBP8.43□□□□□ -1.06
GFD1YMR255W SRS2P12954 1174 aa8.42□□□□□ -1.06
GFD1YMR255W NGR1P32831 672 aaKnown RBP8.42□□□□□ -1.06
GFD1YMR255W CWH41P53008 833 aa8.42□□□□□ -1.06
GFD1YMR255W KAR5Q04746 504 aa8.42□□□□□ -1.06
GFD1YMR255W MYO4P32492 1471 aa8.42□□□□□ -1.06
GFD1YMR255W UFD4P33202 1483 aa8.41□□□□□ -1.06
GFD1YMR255W SMC4Q12267 1418 aa8.41□□□□□ -1.06
GFD1YMR255W ALA1P40825 983 aaKnown RBP8.41□□□□□ -1.06
GFD1YMR255W YPQ2Q06328 317 aa8.41□□□□□ -1.06
GFD1YMR255W YCF1P39109 1515 aaKnown RBP8.4□□□□□ -1.06
GFD1YMR255W GCR2Q01722 534 aa8.4□□□□□ -1.06
GFD1YMR255W BOL3P39724 118 aa8.39□□□□□ -1.07
GFD1YMR255W FOX2Q02207 900 aaKnown RBP8.39□□□□□ -1.07
GFD1YMR255W GAR1P28007 205 aaKnown RBP8.38□□□□□ -1.07
GFD1YMR255W SSN3P39073 555 aa8.38□□□□□ -1.07
GFD1YMR255W NUP85P46673 744 aa8.38□□□□□ -1.07
GFD1YMR255W SSF1P38789 453 aaPredicted RBP8.37□□□□□ -1.07
GFD1YMR255W YJR098CP47139 656 aa8.37□□□□□ -1.07
GFD1YMR255W TY2B-LR1P0C2J3 1770 aa8.36□□□□□ -1.07
GFD1YMR255W TY2B-FP0CX63 1770 aa8.36□□□□□ -1.07
GFD1YMR255W TY2B-GR2P0CX64 1770 aa8.36□□□□□ -1.07
GFD1YMR255W TY2B-CP25384 1770 aa8.36□□□□□ -1.07
GFD1YMR255W TY2B-DR2Q03494 1770 aa8.36□□□□□ -1.07
GFD1YMR255W TY1B-DR1Q03855 1755 aa8.36□□□□□ -1.07
GFD1YMR255W TY2B-DR3Q07791 1770 aaKnown RBP8.36□□□□□ -1.07
GFD1YMR255W TY2B-OR1Q12113 1770 aa8.36□□□□□ -1.07
GFD1YMR255W TY2B-DR1Q12472 1770 aa8.36□□□□□ -1.07
GFD1YMR255W TY2B-OR2Q12501 1770 aa8.36□□□□□ -1.07
GFD1YMR255W FUR4P05316 633 aaKnown RBP8.36□□□□□ -1.07
GFD1YMR255W LSC2P53312 427 aa8.36□□□□□ -1.07
GFD1YMR255W YBL113CQ7M4S9 792 aa8.36□□□□□ -1.07
GFD1YMR255W YBR197CP38306 217 aa8.35□□□□□ -1.07
GFD1YMR255W ERP5P38819 212 aa8.35□□□□□ -1.07
GFD1YMR255W CAB1Q04430 367 aa8.35□□□□□ -1.07
GFD1YMR255W MCM1P11746 286 aa8.34□□□□□ -1.07
GFD1YMR255W ISC10P32645 267 aa8.34□□□□□ -1.07
GFD1YMR255W YNL165WP53891 406 aa8.34□□□□□ -1.07
GFD1YMR255W TY1B-DR3Q99231 1755 aa8.33□□□□□ -1.08
GFD1YMR255W HXT5P38695 592 aa8.33□□□□□ -1.08
GFD1YMR255W MSN5P52918 1224 aa8.33□□□□□ -1.08
GFD1YMR255W NOP8Q08287 484 aaPredicted RBP8.33□□□□□ -1.08
GFD1YMR255W TCB1Q12466 1186 aa8.33□□□□□ -1.08
GFD1YMR255W Q0182Q9ZZW1 134 aa8.33□□□□□ -1.08
GFD1YMR255W GBP2P25555 427 aaKnown RBP RIP-Chip data8.32□□□□□ -1.08not detected
Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms