RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C ECM23Q02710 187 aa7.23□□□□□ -1.25
SMD3YLR147C SUB2Q07478 446 aaKnown RBP7.23□□□□□ -1.25
SMD3YLR147C NOB1Q08444 459 aaKnown RBP7.23□□□□□ -1.25
SMD3YLR147C HAP4P14064 554 aa7.22□□□□□ -1.25
SMD3YLR147C SUM1P46676 1062 aa7.22□□□□□ -1.25
SMD3YLR147C GAR1P28007 205 aaKnown RBP7.21□□□□□ -1.26
SMD3YLR147C DAL1P32375 460 aa7.21□□□□□ -1.26
SMD3YLR147C VTC4P47075 721 aa7.21□□□□□ -1.26
SMD3YLR147C ROM1P53046 1155 aa7.21□□□□□ -1.26
SMD3YLR147C UBP2Q01476 1272 aa7.21□□□□□ -1.26
SMD3YLR147C YPQ2Q06328 317 aa7.21□□□□□ -1.26
SMD3YLR147C TY1A-BLQ12266 440 aa7.21□□□□□ -1.26
SMD3YLR147C YML083CQ04526 418 aa7.2□□□□□ -1.26
SMD3YLR147C GAS4Q08271 471 aa7.2□□□□□ -1.26
SMD3YLR147C MSN5P52918 1224 aa7.19□□□□□ -1.26
SMD3YLR147C SCW11P53189 542 aa7.19□□□□□ -1.26
SMD3YLR147C SLA1P32790 1244 aa7.18□□□□□ -1.26
SMD3YLR147C ACO2P39533 789 aa7.18□□□□□ -1.26
SMD3YLR147C CYT1P07143 309 aa7.17□□□□□ -1.26
SMD3YLR147C UBX7P38349 436 aa7.17□□□□□ -1.26
SMD3YLR147C OSH7P38755 437 aa7.17□□□□□ -1.26
SMD3YLR147C CDC19P00549 500 aaKnown RBP7.16□□□□□ -1.26
SMD3YLR147C YDL176WQ12027 708 aa7.16□□□□□ -1.26
SMD3YLR147C TY1A-DR3Q12441 440 aa7.16□□□□□ -1.26
SMD3YLR147C UBP1P25037 809 aa7.15□□□□□ -1.26
SMD3YLR147C MCM1P11746 286 aa7.14□□□□□ -1.27
SMD3YLR147C SHM1P37292 490 aaPredicted RBP7.14□□□□□ -1.27
SMD3YLR147C ALA1P40825 983 aaKnown RBP7.14□□□□□ -1.27
SMD3YLR147C NAM8Q00539 523 aaKnown RBP7.13□□□□□ -1.27
SMD3YLR147C RPS31P05759 152 aaKnown RBP7.12□□□□□ -1.27
SMD3YLR147C VAN1P23642 535 aa7.12□□□□□ -1.27
SMD3YLR147C NGR1P32831 672 aaKnown RBP7.12□□□□□ -1.27
SMD3YLR147C YIR007WP40566 764 aa7.12□□□□□ -1.27
SMD3YLR147C JJJ2P46997 583 aa7.12□□□□□ -1.27
SMD3YLR147C CAF120P53836 1060 aa7.12□□□□□ -1.27
SMD3YLR147C YNL165WP53891 406 aa7.11□□□□□ -1.27
SMD3YLR147C GBP2P25555 427 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
SMD3YLR147C IRE1P32361 1115 aa7.1□□□□□ -1.27
SMD3YLR147C SUV3P32580 737 aa7.1□□□□□ -1.27
SMD3YLR147C AHP1P38013 176 aaKnown RBP7.1□□□□□ -1.27
SMD3YLR147C ROG3P43602 733 aa7.1□□□□□ -1.27
SMD3YLR147C TY1A-MR1Q04215 440 aa7.1□□□□□ -1.27
SMD3YLR147C UBP15P50101 1230 aa7.09□□□□□ -1.27
SMD3YLR147C CCP1P00431 361 aa7.08□□□□□ -1.28
SMD3YLR147C CWC15Q03772 175 aaKnown RBP7.08□□□□□ -1.28
SMD3YLR147C PUF6Q04373 656 aaKnown RBP7.08□□□□□ -1.28
SMD3YLR147C TRS33Q99394 268 aa7.08□□□□□ -1.28
SMD3YLR147C HXT5P38695 592 aa7.07□□□□□ -1.28
SMD3YLR147C PSH1Q12161 406 aa7.07□□□□□ -1.28
SMD3YLR147C PDC6P26263 563 aaKnown RBP7.06□□□□□ -1.28
SMD3YLR147C YPL062WQ02781 134 aa7.06□□□□□ -1.28
SMD3YLR147C Q0182Q9ZZW1 134 aa7.05□□□□□ -1.28
SMD3YLR147C SSA1P10591 642 aaKnown RBP7.04□□□□□ -1.28
SMD3YLR147C TPS3P38426 1054 aaKnown RBP7.04□□□□□ -1.28
SMD3YLR147C CWH41P53008 833 aa7.04□□□□□ -1.28
SMD3YLR147C LEU1P07264 779 aaKnown RBP7.03□□□□□ -1.28
SMD3YLR147C MLF3P32047 452 aa7.03□□□□□ -1.28
SMD3YLR147C CAB1Q04430 367 aa7.03□□□□□ -1.28
SMD3YLR147C PUN1Q06991 263 aa7.03□□□□□ -1.28
SMD3YLR147C SRS2P12954 1174 aa7.02□□□□□ -1.29
SMD3YLR147C YBR197CP38306 217 aa7.02□□□□□ -1.29
SMD3YLR147C ALD4P46367 519 aaKnown RBP7.02□□□□□ -1.29
SMD3YLR147C ALD2P47771 506 aa7.02□□□□□ -1.29
SMD3YLR147C SCD5P34758 872 aa7.01□□□□□ -1.29
SMD3YLR147C CUZ1P53899 274 aa7.01□□□□□ -1.29
SMD3YLR147C UTP4Q06679 776 aaKnown RBP7.01□□□□□ -1.29
SMD3YLR147C PNP1Q05788 311 aa7□□□□□ -1.29
SMD3YLR147C YTA6P40328 754 aa6.99□□□□□ -1.29
SMD3YLR147C DIT1P21623 536 aa6.98□□□□□ -1.29
SMD3YLR147C GEF1P37020 779 aa6.98□□□□□ -1.29
SMD3YLR147C RGA1P39083 1007 aa6.98□□□□□ -1.29
SMD3YLR147C RPL34AP87262 121 aaPredicted RBP6.98□□□□□ -1.29
SMD3YLR147C YMR265CQ03508 461 aaKnown RBP6.98□□□□□ -1.29
SMD3YLR147C MRPL16P38064 232 aa6.97□□□□□ -1.29
SMD3YLR147C FOX2Q02207 900 aaKnown RBP6.97□□□□□ -1.29
SMD3YLR147C MRPL33P20084 86 aa6.96□□□□□ -1.3
SMD3YLR147C ISC10P32645 267 aa6.96□□□□□ -1.3
SMD3YLR147C HPF1Q05164 967 aa6.96□□□□□ -1.3
SMD3YLR147C RGP1P16664 663 aa6.95□□□□□ -1.3
SMD3YLR147C KAP122P32767 1081 aa6.95□□□□□ -1.3
SMD3YLR147C SPR3P41901 512 aa6.95□□□□□ -1.3
SMD3YLR147C KRE33P53914 1056 aaKnown RBP6.95□□□□□ -1.3
SMD3YLR147C VMA3P25515 160 aa6.94□□□□□ -1.3
SMD3YLR147C BOI1P38041 980 aaKnown RBP6.94□□□□□ -1.3
SMD3YLR147C MTO1P53070 669 aa6.94□□□□□ -1.3
SMD3YLR147C SYT1Q06836 1226 aa6.94□□□□□ -1.3
SMD3YLR147C STB3Q12427 513 aa6.94□□□□□ -1.3
SMD3YLR147C CEM1P39525 442 aa6.93□□□□□ -1.3
SMD3YLR147C BOL3P39724 118 aa6.93□□□□□ -1.3
SMD3YLR147C QDR2P40474 542 aa6.93□□□□□ -1.3
SMD3YLR147C LYS5P50113 272 aa6.93□□□□□ -1.3
SMD3YLR147C YGR035CP53222 116 aa6.93□□□□□ -1.3
SMD3YLR147C YDR461C-AQ2V2P7 80 aa6.93□□□□□ -1.3
SMD3YLR147C RPC31P17890 251 aa6.92□□□□□ -1.3
SMD3YLR147C CDC3P32457 520 aaKnown RBP6.92□□□□□ -1.3
SMD3YLR147C SKP1P52286 194 aa6.92□□□□□ -1.3
SMD3YLR147C ADE12P80210 433 aaKnown RBP6.92□□□□□ -1.3
SMD3YLR147C LSO1Q3E827 93 aa6.92□□□□□ -1.3
SMD3YLR147C RRN6P32786 894 aa6.9□□□□□ -1.3
SMD3YLR147C JJJ3P47138 172 aa6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms