RNA–Protein interactions for RNA: YLR107W

REX3, Transcript of RNA exonuclease, yeastyeast

Gene REX3, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
REX3YLR107W GEF1P37020 779 aa8.64□□□□□ -1.03
REX3YLR107W SUM1P46676 1062 aa8.64□□□□□ -1.03
REX3YLR107W UTP7P40055 554 aaKnown RBP8.63□□□□□ -1.03
REX3YLR107W YJR098CP47139 656 aa8.63□□□□□ -1.03
REX3YLR107W LSC2P53312 427 aa8.63□□□□□ -1.03
REX3YLR107W YPQ2Q06328 317 aa8.63□□□□□ -1.03
REX3YLR107W VAN1P23642 535 aa8.61□□□□□ -1.03
REX3YLR107W PUF6Q04373 656 aaKnown RBP8.61□□□□□ -1.03
REX3YLR107W VTC4P47075 721 aa8.6□□□□□ -1.03
REX3YLR107W RPL34AP87262 121 aaPredicted RBP8.6□□□□□ -1.03
REX3YLR107W MCM1P11746 286 aa8.59□□□□□ -1.03
REX3YLR107W SSN3P39073 555 aa8.59□□□□□ -1.03
REX3YLR107W MSN5P52918 1224 aa8.59□□□□□ -1.03
REX3YLR107W TRS33Q99394 268 aa8.59□□□□□ -1.03
REX3YLR107W CWC15Q03772 175 aaKnown RBP8.58□□□□□ -1.04
REX3YLR107W OPT2Q06593 877 aa8.58□□□□□ -1.04
REX3YLR107W MET22P32179 357 aa8.57□□□□□ -1.04
REX3YLR107W NGR1P32831 672 aaKnown RBP8.57□□□□□ -1.04
REX3YLR107W YLR346CQ06139 101 aa8.57□□□□□ -1.04
REX3YLR107W LCB5Q06147 687 aaKnown RBP8.56□□□□□ -1.04
REX3YLR107W TCB1Q12466 1186 aa8.56□□□□□ -1.04
REX3YLR107W DAL1P32375 460 aa8.55□□□□□ -1.04
REX3YLR107W SUV3P32580 737 aa8.55□□□□□ -1.04
REX3YLR107W GLY1P37303 387 aaKnown RBP8.55□□□□□ -1.04
REX3YLR107W UBP2Q01476 1272 aa8.54□□□□□ -1.04
REX3YLR107W YDR444WQ04093 687 aa8.54□□□□□ -1.04
REX3YLR107W SLA1P32790 1244 aa8.53□□□□□ -1.04
REX3YLR107W TPS3P38426 1054 aaKnown RBP8.53□□□□□ -1.04
REX3YLR107W ALA1P40825 983 aaKnown RBP8.53□□□□□ -1.04
REX3YLR107W JJJ2P46997 583 aa8.53□□□□□ -1.04
REX3YLR107W SRS2P12954 1174 aa8.52□□□□□ -1.05
REX3YLR107W CWH41P53008 833 aa8.52□□□□□ -1.05
REX3YLR107W PUN1Q06991 263 aa8.52□□□□□ -1.05
REX3YLR107W TY1A-DR3Q12441 440 aa8.52□□□□□ -1.05
REX3YLR107W AHP1P38013 176 aaKnown RBP8.51□□□□□ -1.05
REX3YLR107W ALD4P46367 519 aaKnown RBP8.51□□□□□ -1.05
REX3YLR107W CDC3P32457 520 aaKnown RBP8.5□□□□□ -1.05
REX3YLR107W SHM1P37292 490 aaPredicted RBP8.5□□□□□ -1.05
REX3YLR107W HXT5P38695 592 aa8.5□□□□□ -1.05
REX3YLR107W SCW11P53189 542 aa8.5□□□□□ -1.05
REX3YLR107W TY1A-BLQ12266 440 aa8.5□□□□□ -1.05
REX3YLR107W PNP1Q05788 311 aa8.49□□□□□ -1.05
REX3YLR107W CDC19P00549 500 aaKnown RBP8.48□□□□□ -1.05
REX3YLR107W SCD5P34758 872 aa8.48□□□□□ -1.05
REX3YLR107W YNL165WP53891 406 aa8.48□□□□□ -1.05
REX3YLR107W CAB1Q04430 367 aa8.48□□□□□ -1.05
REX3YLR107W IRE1P32361 1115 aa8.47□□□□□ -1.05
REX3YLR107W RPS31P05759 152 aaKnown RBP8.46□□□□□ -1.06
REX3YLR107W OSH7P38755 437 aa8.46□□□□□ -1.06
REX3YLR107W UTP4Q06679 776 aaKnown RBP8.46□□□□□ -1.06
REX3YLR107W YBR197CP38306 217 aa8.45□□□□□ -1.06
REX3YLR107W UBP15P50101 1230 aa8.45□□□□□ -1.06
REX3YLR107W MLF3P32047 452 aa8.44□□□□□ -1.06
REX3YLR107W FOX2Q02207 900 aaKnown RBP8.44□□□□□ -1.06
REX3YLR107W Q0182Q9ZZW1 134 aa8.44□□□□□ -1.06
REX3YLR107W PSH1Q12161 406 aa8.43□□□□□ -1.06
REX3YLR107W PDC6P26263 563 aaKnown RBP8.42□□□□□ -1.06
REX3YLR107W ACO2P39533 789 aa8.42□□□□□ -1.06
REX3YLR107W BOL3P39724 118 aa8.42□□□□□ -1.06
REX3YLR107W ISC10P32645 267 aa8.41□□□□□ -1.06
REX3YLR107W NAM8Q00539 523 aaKnown RBP8.41□□□□□ -1.06
REX3YLR107W GAR1P28007 205 aaKnown RBP8.4□□□□□ -1.06
REX3YLR107W YTA6P40328 754 aa8.4□□□□□ -1.06
REX3YLR107W KAR5Q04746 504 aa8.4□□□□□ -1.06
REX3YLR107W FUR4P05316 633 aaKnown RBP8.39□□□□□ -1.07
REX3YLR107W LEU1P07264 779 aaKnown RBP8.39□□□□□ -1.07
REX3YLR107W MRPL33P20084 86 aa8.39□□□□□ -1.07
REX3YLR107W RRN6P32786 894 aa8.39□□□□□ -1.07
REX3YLR107W ROG3P43602 733 aa8.39□□□□□ -1.07
REX3YLR107W ALD2P47771 506 aa8.39□□□□□ -1.07
REX3YLR107W TY1A-MR1Q04215 440 aa8.39□□□□□ -1.07
REX3YLR107W LSO1Q3E827 93 aa8.39□□□□□ -1.07
REX3YLR107W RGA1P39083 1007 aa8.38□□□□□ -1.07
REX3YLR107W BOI1P38041 980 aaKnown RBP8.37□□□□□ -1.07
REX3YLR107W YDL176WQ12027 708 aa8.37□□□□□ -1.07
REX3YLR107W HAT1Q12341 374 aa8.37□□□□□ -1.07
REX3YLR107W YIR007WP40566 764 aa8.36□□□□□ -1.07
REX3YLR107W CAF120P53836 1060 aa8.36□□□□□ -1.07
REX3YLR107W CCP1P00431 361 aa8.35□□□□□ -1.07
REX3YLR107W VMA3P25515 160 aa8.35□□□□□ -1.07
REX3YLR107W SSF1P38789 453 aaPredicted RBP8.35□□□□□ -1.07
REX3YLR107W ATG1P53104 897 aa8.35□□□□□ -1.07
REX3YLR107W APC11Q12157 165 aa8.35□□□□□ -1.07
REX3YLR107W KAP122P32767 1081 aa8.33□□□□□ -1.08
REX3YLR107W QDR2P40474 542 aa8.33□□□□□ -1.08
REX3YLR107W YBL113CQ7M4S9 792 aa8.33□□□□□ -1.08
REX3YLR107W TRL1P09880 827 aaKnown RBP8.32□□□□□ -1.08
REX3YLR107W ERP5P38819 212 aa8.32□□□□□ -1.08
REX3YLR107W MTO1P53070 669 aa8.32□□□□□ -1.08
REX3YLR107W RGP1P16664 663 aa8.31□□□□□ -1.08
REX3YLR107W RPC31P17890 251 aa8.31□□□□□ -1.08
REX3YLR107W KTR2P33550 425 aa8.31□□□□□ -1.08
REX3YLR107W GLO3P38682 493 aaKnown RBP8.31□□□□□ -1.08
REX3YLR107W CUZ1P53899 274 aa8.31□□□□□ -1.08
REX3YLR107W DIT1P21623 536 aa8.3□□□□□ -1.08
REX3YLR107W RPB10P22139 70 aa8.3□□□□□ -1.08
REX3YLR107W GBP2P25555 427 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
REX3YLR107W DYS1P38791 387 aa8.3□□□□□ -1.08
REX3YLR107W QDR1P40475 563 aa8.3□□□□□ -1.08
REX3YLR107W MRPL16P38064 232 aa8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms