RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C YJR008WP47085 338 aa14.55□□□□□ -0.08
YKR040CYKR040C ICL1P28240 557 aaPredicted RBP14.54□□□□□ -0.08
YKR040CYKR040C FRD1P32614 470 aaKnown RBP14.54□□□□□ -0.08
YKR040CYKR040C RPN1P38764 993 aaKnown RBP14.54□□□□□ -0.08
YKR040CYKR040C FCP1Q03254 732 aa14.54□□□□□ -0.08
YKR040CYKR040C TOP1P04786 769 aa14.53□□□□□ -0.08
YKR040CYKR040C UBP16Q02863 499 aa14.53□□□□□ -0.08
YKR040CYKR040C YKU70P32807 602 aa14.52□□□□□ -0.09
YKR040CYKR040C SAS4Q04003 481 aa14.52□□□□□ -0.09
YKR040CYKR040C PMD1P32634 1753 aa14.52□□□□□ -0.09
YKR040CYKR040C NOP8Q08287 484 aaPredicted RBP14.51□□□□□ -0.09
YKR040CYKR040C RVB2Q12464 471 aaKnown RBP14.51□□□□□ -0.09
YKR040CYKR040C MAK21Q12176 1025 aaKnown RBP14.5□□□□□ -0.09
YKR040CYKR040C GRX6Q12438 231 aa14.5□□□□□ -0.09
YKR040CYKR040C NSR1P27476 414 aaKnown RBP RIP-Chip data14.49□□□□□ -0.09not detected
YKR040CYKR040C YGR122WP53272 402 aa14.49□□□□□ -0.09
YKR040CYKR040C FPK1P53739 893 aa14.49□□□□□ -0.09
YKR040CYKR040C RPS9BP05755 195 aaKnown RBP14.48□□□□□ -0.09
YKR040CYKR040C SET1P38827 1080 aaKnown RBP14.47□□□□□ -0.09
YKR040CYKR040C SHC1P39000 512 aa14.47□□□□□ -0.09
YKR040CYKR040C ITC1P53125 1264 aa14.47□□□□□ -0.09
YKR040CYKR040C YPP1P46951 817 aa14.46□□□□□ -0.09
YKR040CYKR040C SWC3P31376 625 aa14.45□□□□□ -0.1
YKR040CYKR040C RAD24P32641 659 aa14.45□□□□□ -0.1
YKR040CYKR040C YRB30P53107 440 aaPredicted RBP14.45□□□□□ -0.1
YKR040CYKR040C PSH1Q12161 406 aa14.45□□□□□ -0.1
YKR040CYKR040C SLI15P38283 698 aa14.44□□□□□ -0.1
YKR040CYKR040C ATG20Q07528 640 aa14.44□□□□□ -0.1
YKR040CYKR040C RET1P22276 1149 aaKnown RBP14.43□□□□□ -0.1
YKR040CYKR040C NAB6Q03735 1134 aaKnown RBP RIP-Chip data14.42□□□□□ -0.1not detected
YKR040CYKR040C CSI1Q04368 295 aa14.42□□□□□ -0.1
YKR040CYKR040C UBP12P39538 1254 aa14.41□□□□□ -0.1
YKR040CYKR040C DPH6Q12429 685 aa14.41□□□□□ -0.1
YKR040CYKR040C ICP55P40051 511 aa14.4□□□□□ -0.1
YKR040CYKR040C DIP2Q12220 943 aaPredicted RBP14.4□□□□□ -0.1
YKR040CYKR040C SUP35P05453 685 aaKnown RBP14.39□□□□□ -0.11
YKR040CYKR040C DAL5P15365 543 aa14.39□□□□□ -0.11
YKR040CYKR040C PRS1P32895 427 aaKnown RBP14.39□□□□□ -0.11
YKR040CYKR040C MTC5Q03897 1148 aa14.39□□□□□ -0.11
YKR040CYKR040C DPL1Q05567 589 aa14.39□□□□□ -0.11
YKR040CYKR040C SAC3P46674 1301 aa14.38□□□□□ -0.11
YKR040CYKR040C KRE2P27809 442 aa14.37□□□□□ -0.11
YKR040CYKR040C BOI2P39969 1040 aa14.37□□□□□ -0.11
YKR040CYKR040C YIL092WP40497 633 aa14.37□□□□□ -0.11
YKR040CYKR040C NGR1P32831 672 aaKnown RBP14.36□□□□□ -0.11
YKR040CYKR040C PEX21P50091 288 aa14.36□□□□□ -0.11
YKR040CYKR040C TRP5P00931 707 aaKnown RBP14.35□□□□□ -0.11
YKR040CYKR040C RPS19AP07280 144 aaKnown RBP14.35□□□□□ -0.11
YKR040CYKR040C RPS19BP07281 144 aaPredicted RBP14.35□□□□□ -0.11
YKR040CYKR040C MSM1P22438 575 aa14.35□□□□□ -0.11
YKR040CYKR040C HXT10P43581 546 aa14.35□□□□□ -0.11
YKR040CYKR040C SNU66Q12420 587 aaPredicted RBP14.35□□□□□ -0.11
YKR040CYKR040C RAD2P07276 1031 aa14.34□□□□□ -0.11
YKR040CYKR040C MGM1P32266 881 aa14.34□□□□□ -0.11
YKR040CYKR040C TIF4632P39936 914 aaKnown RBP14.34□□□□□ -0.11
YKR040CYKR040C PUS5Q06244 254 aa14.34□□□□□ -0.11
YKR040CYKR040C THI3Q07471 609 aa14.34□□□□□ -0.11
YKR040CYKR040C THS1P04801 734 aaKnown RBP14.33□□□□□ -0.12
YKR040CYKR040C RPT4P53549 437 aaKnown RBP14.33□□□□□ -0.12
YKR040CYKR040C UBX2Q04228 584 aa14.33□□□□□ -0.12
YKR040CYKR040C FAS2P19097 1887 aaKnown RBP14.32□□□□□ -0.12
YKR040CYKR040C SSA4P22202 642 aaKnown RBP14.32□□□□□ -0.12
YKR040CYKR040C SET4P42948 560 aa14.32□□□□□ -0.12
YKR040CYKR040C SPL2P38839 148 aa14.31□□□□□ -0.12
YKR040CYKR040C SRC1Q03707 834 aa14.31□□□□□ -0.12
YKR040CYKR040C RTG2P32608 588 aaKnown RBP14.3□□□□□ -0.12
YKR040CYKR040C HKR1P41809 1802 aa14.28□□□□□ -0.12
YKR040CYKR040C GAS5Q08193 484 aa14.28□□□□□ -0.12
YKR040CYKR040C YLR278CQ05854 1341 aa14.27□□□□□ -0.12
YKR040CYKR040C GAP1P19145 602 aaPredicted RBP14.27□□□□□ -0.13
YKR040CYKR040C GLC3P32775 704 aa14.27□□□□□ -0.13
YKR040CYKR040C YNG2P38806 282 aaKnown RBP14.27□□□□□ -0.13
YKR040CYKR040C RRG1Q12167 365 aaPredicted RBP14.27□□□□□ -0.13
YKR040CYKR040C FUN12P39730 1002 aaKnown RBP14.26□□□□□ -0.13
YKR040CYKR040C AFG2P32794 780 aa14.25□□□□□ -0.13
YKR040CYKR040C TFA1P36100 482 aa14.25□□□□□ -0.13
YKR040CYKR040C FET4P40988 552 aa14.25□□□□□ -0.13
YKR040CYKR040C GSM1P42950 618 aa14.25□□□□□ -0.13
YKR040CYKR040C TRM44Q02648 567 aaKnown RBP14.25□□□□□ -0.13
YKR040CYKR040C NUG1P40010 520 aaKnown RBP14.24□□□□□ -0.13
YKR040CYKR040C IRC4Q03036 179 aa14.24□□□□□ -0.13
YKR040CYKR040C AIM7Q12156 149 aa14.24□□□□□ -0.13
YKR040CYKR040C TIM50Q02776 476 aa14.23□□□□□ -0.13
YKR040CYKR040C CRF1Q04930 467 aa14.23□□□□□ -0.13
YKR040CYKR040C ADR1P07248 1323 aa14.22□□□□□ -0.13
YKR040CYKR040C LCB1P25045 558 aaKnown RBP14.22□□□□□ -0.13
YKR040CYKR040C SPO1P53541 631 aa14.22□□□□□ -0.13
YKR040CYKR040C PRP42Q03776 544 aaKnown RBP14.22□□□□□ -0.13
YKR040CYKR040C SSF1P38789 453 aaPredicted RBP14.21□□□□□ -0.13
YKR040CYKR040C HGH1P48362 394 aaKnown RBP14.21□□□□□ -0.13
YKR040CYKR040C VPS4P52917 437 aa14.2□□□□□ -0.14
YKR040CYKR040C YGR117CP53270 476 aa14.2□□□□□ -0.14
YKR040CYKR040C TOS4Q06266 489 aa14.2□□□□□ -0.14
YKR040CYKR040C GYP5Q12344 894 aa14.2□□□□□ -0.14
YKR040CYKR040C SEC18P18759 758 aaKnown RBP14.19□□□□□ -0.14
YKR040CYKR040C GCD7P32502 381 aaPredicted RBP14.19□□□□□ -0.14
YKR040CYKR040C PUF6Q04373 656 aaKnown RBP14.19□□□□□ -0.14
YKR040CYKR040C SLA1P32790 1244 aa14.18□□□□□ -0.14
YKR040CYKR040C VHR2P40041 505 aa14.18□□□□□ -0.14
YKR040CYKR040C POM152P39685 1337 aa14.17□□□□□ -0.14
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms