RNA–Protein interactions for RNA: YJR045C

SSC1, Transcript of Hsp70 family ATPase, yeastyeast

Gene SSC1, Length 1,965 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSC1YJR045C THI22Q06490 572 aa8.63□□□□□ -1.03
SSC1YJR045C IRC3Q06683 689 aa8.63□□□□□ -1.03
SSC1YJR045C RLF2Q12495 606 aa8.63□□□□□ -1.03
SSC1YJR045C COQ4O13525 335 aa8.62□□□□□ -1.03
SSC1YJR045C MAM1P40065 302 aa8.62□□□□□ -1.03
SSC1YJR045C MPP10P47083 593 aaKnown RBP8.62□□□□□ -1.03
SSC1YJR045C VPS64Q03944 604 aa8.62□□□□□ -1.03
SSC1YJR045C ENV11P53246 860 aa8.62□□□□□ -1.03
SSC1YJR045C ZDS2P54786 942 aa8.62□□□□□ -1.03
SSC1YJR045C BMS1Q08965 1183 aaKnown RBP8.62□□□□□ -1.03
SSC1YJR045C YPR204WQ08995 1032 aa8.62□□□□□ -1.03
SSC1YJR045C YBR287WP38355 427 aa8.61□□□□□ -1.03
SSC1YJR045C DIB1Q06819 143 aaPredicted RBP8.61□□□□□ -1.03
SSC1YJR045C RTT109Q07794 436 aa8.61□□□□□ -1.03
SSC1YJR045C TOP1P04786 769 aa8.61□□□□□ -1.03
SSC1YJR045C CAF20P12962 161 aaKnown RBP8.61□□□□□ -1.03
SSC1YJR045C NUG1P40010 520 aaKnown RBP8.59□□□□□ -1.03
SSC1YJR045C FAS2P19097 1887 aaKnown RBP8.59□□□□□ -1.03
SSC1YJR045C ROX1P25042 368 aa8.59□□□□□ -1.03
SSC1YJR045C ICL1P28240 557 aaPredicted RBP8.59□□□□□ -1.03
SSC1YJR045C GYP7P48365 746 aa8.59□□□□□ -1.03
SSC1YJR045C FPK1P53739 893 aa8.59□□□□□ -1.03
SSC1YJR045C SSK22P25390 1331 aaPredicted RBP8.59□□□□□ -1.04
SSC1YJR045C YDL144CQ07589 356 aa8.58□□□□□ -1.04
SSC1YJR045C SIT4P20604 311 aa8.57□□□□□ -1.04
SSC1YJR045C UBP16Q02863 499 aa8.57□□□□□ -1.04
SSC1YJR045C YOL057WQ08225 711 aa8.57□□□□□ -1.04
SSC1YJR045C HAT1Q12341 374 aa8.57□□□□□ -1.04
SSC1YJR045C HKR1P41809 1802 aa8.57□□□□□ -1.04
SSC1YJR045C RPL17AP05740 184 aaKnown RBP8.57□□□□□ -1.04
SSC1YJR045C RNA1P11745 407 aaKnown RBP8.57□□□□□ -1.04
SSC1YJR045C SSA4P22202 642 aaKnown RBP8.57□□□□□ -1.04
SSC1YJR045C SLI15P38283 698 aa8.57□□□□□ -1.04
SSC1YJR045C RPL17BP46990 184 aaKnown RBP8.57□□□□□ -1.04
SSC1YJR045C HEF3P53978 1044 aaKnown RBP8.57□□□□□ -1.04
SSC1YJR045C TPD3P31383 635 aa8.56□□□□□ -1.04
SSC1YJR045C RRD1P40454 393 aaKnown RBP8.56□□□□□ -1.04
SSC1YJR045C GRX6Q12438 231 aa8.56□□□□□ -1.04
SSC1YJR045C RPN1P38764 993 aaKnown RBP8.55□□□□□ -1.04
SSC1YJR045C KRI1P42846 591 aaKnown RBP8.55□□□□□ -1.04
SSC1YJR045C ATG20Q07528 640 aa8.55□□□□□ -1.04
SSC1YJR045C YKU70P32807 602 aa8.55□□□□□ -1.04
SSC1YJR045C SHC1P39000 512 aa8.55□□□□□ -1.04
SSC1YJR045C SAS4Q04003 481 aa8.55□□□□□ -1.04
SSC1YJR045C YLR271WQ06152 274 aa8.55□□□□□ -1.04
SSC1YJR045C SWI1P09547 1314 aa8.54□□□□□ -1.04
SSC1YJR045C RPS9BP05755 195 aaKnown RBP8.54□□□□□ -1.04
SSC1YJR045C FRD1P32614 470 aaKnown RBP8.54□□□□□ -1.04
SSC1YJR045C PEX21P50091 288 aa8.54□□□□□ -1.04
SSC1YJR045C PKH1Q03407 766 aa8.54□□□□□ -1.04
SSC1YJR045C SYF1Q04048 859 aaPredicted RBP8.54□□□□□ -1.04
SSC1YJR045C FPR4Q06205 392 aaPredicted RBP8.54□□□□□ -1.04
SSC1YJR045C PUS5Q06244 254 aa8.54□□□□□ -1.04
SSC1YJR045C SLN1P39928 1220 aaPredicted RBP8.53□□□□□ -1.04
SSC1YJR045C FIG2P25653 1609 aa8.53□□□□□ -1.04
SSC1YJR045C DEF1P35732 738 aaKnown RBP8.53□□□□□ -1.04
SSC1YJR045C DNM1P54861 757 aa8.53□□□□□ -1.04
SSC1YJR045C THS1P04801 734 aaKnown RBP8.52□□□□□ -1.05
SSC1YJR045C CTR9P89105 1077 aa8.52□□□□□ -1.05
SSC1YJR045C SRT1Q03175 343 aa8.52□□□□□ -1.05
SSC1YJR045C FCP1Q03254 732 aa8.52□□□□□ -1.05
SSC1YJR045C HAA1Q12753 694 aaKnown RBP8.52□□□□□ -1.05
SSC1YJR045C RET1P22276 1149 aaKnown RBP8.52□□□□□ -1.05
SSC1YJR045C DJP1P40564 432 aa8.52□□□□□ -1.05
SSC1YJR045C YDR306CQ06640 478 aa8.52□□□□□ -1.05
SSC1YJR045C CST6P40535 587 aa8.51□□□□□ -1.05
SSC1YJR045C NUP133P36161 1157 aa8.5□□□□□ -1.05
SSC1YJR045C NOP58Q12499 511 aaKnown RBP8.5□□□□□ -1.05
SSC1YJR045C YLR278CQ05854 1341 aa8.5□□□□□ -1.05
SSC1YJR045C MRP7P12687 371 aa8.5□□□□□ -1.05
SSC1YJR045C YIR014WP40570 242 aa8.48□□□□□ -1.05
SSC1YJR045C YJR008WP47085 338 aa8.48□□□□□ -1.05
SSC1YJR045C RTG2P32608 588 aaKnown RBP8.48□□□□□ -1.05
SSC1YJR045C DPL1Q05567 589 aa8.48□□□□□ -1.05
SSC1YJR045C SUI2P20459 304 aaKnown RBP8.47□□□□□ -1.05
SSC1YJR045C YPP1P46951 817 aa8.47□□□□□ -1.05
SSC1YJR045C RIX1P38883 763 aaPredicted RBP8.46□□□□□ -1.05
SSC1YJR045C SET4P42948 560 aa8.46□□□□□ -1.05
SSC1YJR045C YGR122WP53272 402 aa8.46□□□□□ -1.05
SSC1YJR045C MSM1P22438 575 aa8.46□□□□□ -1.06
SSC1YJR045C RAD26P40352 1085 aa8.46□□□□□ -1.06
SSC1YJR045C DPH6Q12429 685 aa8.46□□□□□ -1.06
SSC1YJR045C RPP0P05317 312 aaKnown RBP8.45□□□□□ -1.06
SSC1YJR045C GAP1P19145 602 aaPredicted RBP8.45□□□□□ -1.06
SSC1YJR045C ITC1P53125 1264 aa8.45□□□□□ -1.06
SSC1YJR045C SET1P38827 1080 aaKnown RBP8.44□□□□□ -1.06
SSC1YJR045C FET4P40988 552 aa8.44□□□□□ -1.06
SSC1YJR045C SAC3P46674 1301 aa8.44□□□□□ -1.06
SSC1YJR045C ICP55P40051 511 aa8.44□□□□□ -1.06
SSC1YJR045C PSH1Q12161 406 aa8.44□□□□□ -1.06
SSC1YJR045C TRP5P00931 707 aaKnown RBP8.43□□□□□ -1.06
SSC1YJR045C TIF4632P39936 914 aaKnown RBP8.43□□□□□ -1.06
SSC1YJR045C TIM50Q02776 476 aa8.43□□□□□ -1.06
SSC1YJR045C DUR1,2P32528 1835 aaKnown RBP8.43□□□□□ -1.06
SSC1YJR045C KRE2P27809 442 aa8.42□□□□□ -1.06
SSC1YJR045C RAD24P32641 659 aa8.42□□□□□ -1.06
SSC1YJR045C GLC3P32775 704 aa8.42□□□□□ -1.06
SSC1YJR045C VHR2P40041 505 aa8.42□□□□□ -1.06
SSC1YJR045C RPT4P53549 437 aaKnown RBP8.42□□□□□ -1.06
SSC1YJR045C TRM44Q02648 567 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 104.5 ms