RNA–Protein interactions for RNA: YIL170W

HXT12, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene HXT12, Length 1,374 nt, Biotype pseudogene, Subcellular localisation Mitochondria .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HXT12YIL170W HAT1Q12341 374 aa11.42□□□□□ -0.58
HXT12YIL170W TOP1P04786 769 aa11.41□□□□□ -0.58
HXT12YIL170W RPN1P38764 993 aaKnown RBP11.41□□□□□ -0.58
HXT12YIL170W YDR306CQ06640 478 aa11.41□□□□□ -0.58
HXT12YIL170W MAK21Q12176 1025 aaKnown RBP11.41□□□□□ -0.58
HXT12YIL170W DAL5P15365 543 aa11.4□□□□□ -0.59
HXT12YIL170W SWC3P31376 625 aa11.4□□□□□ -0.59
HXT12YIL170W SAS4Q04003 481 aa11.4□□□□□ -0.59
HXT12YIL170W FRD1P32614 470 aaKnown RBP11.39□□□□□ -0.59
HXT12YIL170W RAD24P32641 659 aa11.39□□□□□ -0.59
HXT12YIL170W FUN12P39730 1002 aaKnown RBP11.39□□□□□ -0.59
HXT12YIL170W ERO1Q03103 563 aa11.39□□□□□ -0.59
HXT12YIL170W ICL1P28240 557 aaPredicted RBP11.38□□□□□ -0.59
HXT12YIL170W PRS1P32895 427 aaKnown RBP11.37□□□□□ -0.59
HXT12YIL170W TFA1P36100 482 aa11.37□□□□□ -0.59
HXT12YIL170W YPP1P46951 817 aa11.37□□□□□ -0.59
HXT12YIL170W SSK22P25390 1331 aaPredicted RBP11.37□□□□□ -0.59
HXT12YIL170W SIT4P20604 311 aa11.36□□□□□ -0.59
HXT12YIL170W SYF1Q04048 859 aaPredicted RBP11.36□□□□□ -0.59
HXT12YIL170W CSI1Q04368 295 aa11.36□□□□□ -0.59
HXT12YIL170W ITC1P53125 1264 aa11.35□□□□□ -0.59
HXT12YIL170W UBP16Q02863 499 aa11.35□□□□□ -0.59
HXT12YIL170W PSH1Q12161 406 aa11.35□□□□□ -0.59
HXT12YIL170W YKU70P32807 602 aa11.33□□□□□ -0.6
HXT12YIL170W YJR008WP47085 338 aa11.33□□□□□ -0.6
HXT12YIL170W YIL092WP40497 633 aa11.32□□□□□ -0.6
HXT12YIL170W NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.32□□□□□ -0.6not detected
HXT12YIL170W GRX6Q12438 231 aa11.32□□□□□ -0.6
HXT12YIL170W RAD2P07276 1031 aa11.31□□□□□ -0.6
HXT12YIL170W NOP2P40991 618 aaKnown RBP11.31□□□□□ -0.6
HXT12YIL170W YRB30P53107 440 aaPredicted RBP11.31□□□□□ -0.6
HXT12YIL170W SLI15P38283 698 aa11.3□□□□□ -0.6
HXT12YIL170W UBP12P39538 1254 aa11.29□□□□□ -0.6
HXT12YIL170W BOI2P39969 1040 aa11.29□□□□□ -0.6
HXT12YIL170W FAS2P19097 1887 aaKnown RBP11.29□□□□□ -0.6
HXT12YIL170W TRP5P00931 707 aaKnown RBP11.28□□□□□ -0.6
HXT12YIL170W RET1P22276 1149 aaKnown RBP11.28□□□□□ -0.6
HXT12YIL170W SET1P38827 1080 aaKnown RBP11.28□□□□□ -0.6
HXT12YIL170W HXT10P43581 546 aa11.28□□□□□ -0.6
HXT12YIL170W DPH6Q12429 685 aa11.28□□□□□ -0.6
HXT12YIL170W NGR1P32831 672 aaKnown RBP11.28□□□□□ -0.6
HXT12YIL170W SUP35P05453 685 aaKnown RBP11.27□□□□□ -0.61
HXT12YIL170W FPK1P53739 893 aa11.27□□□□□ -0.61
HXT12YIL170W THI3Q07471 609 aa11.27□□□□□ -0.61
HXT12YIL170W SNU66Q12420 587 aaPredicted RBP11.27□□□□□ -0.61
HXT12YIL170W YNG2P38806 282 aaKnown RBP11.26□□□□□ -0.61
HXT12YIL170W SHC1P39000 512 aa11.26□□□□□ -0.61
HXT12YIL170W ATG20Q07528 640 aa11.26□□□□□ -0.61
HXT12YIL170W RPS19AP07280 144 aaKnown RBP11.25□□□□□ -0.61
HXT12YIL170W RPS19BP07281 144 aaPredicted RBP11.25□□□□□ -0.61
HXT12YIL170W MGM1P32266 881 aa11.25□□□□□ -0.61
HXT12YIL170W ICP55P40051 511 aa11.25□□□□□ -0.61
HXT12YIL170W RPT4P53549 437 aaKnown RBP11.25□□□□□ -0.61
HXT12YIL170W SPO1P53541 631 aa11.24□□□□□ -0.61
HXT12YIL170W MTC5Q03897 1148 aa11.24□□□□□ -0.61
HXT12YIL170W SAC3P46674 1301 aa11.23□□□□□ -0.61
HXT12YIL170W HKR1P41809 1802 aa11.23□□□□□ -0.61
HXT12YIL170W SLA1P32790 1244 aa11.23□□□□□ -0.61
HXT12YIL170W TIF4632P39936 914 aaKnown RBP11.23□□□□□ -0.61
HXT12YIL170W SET4P42948 560 aa11.23□□□□□ -0.61
HXT12YIL170W SRC1Q03707 834 aa11.23□□□□□ -0.61
HXT12YIL170W DIP2Q12220 943 aaPredicted RBP11.23□□□□□ -0.61
HXT12YIL170W THS1P04801 734 aaKnown RBP11.22□□□□□ -0.61
HXT12YIL170W KRE2P27809 442 aa11.22□□□□□ -0.61
HXT12YIL170W GSM1P42950 618 aa11.22□□□□□ -0.61
HXT12YIL170W DPL1Q05567 589 aa11.22□□□□□ -0.61
HXT12YIL170W PUF6Q04373 656 aaKnown RBP11.21□□□□□ -0.61
HXT12YIL170W RPS9BP05755 195 aaKnown RBP11.2□□□□□ -0.62
HXT12YIL170W MSM1P22438 575 aa11.2□□□□□ -0.62
HXT12YIL170W SPL2P38839 148 aa11.2□□□□□ -0.62
HXT12YIL170W ILV3P39522 585 aaKnown RBP11.19□□□□□ -0.62
HXT12YIL170W GAP1P19145 602 aaPredicted RBP11.18□□□□□ -0.62
HXT12YIL170W UBX2Q04228 584 aa11.18□□□□□ -0.62
HXT12YIL170W GAS5Q08193 484 aa11.18□□□□□ -0.62
HXT12YIL170W AIM7Q12156 149 aa11.18□□□□□ -0.62
HXT12YIL170W POL32P47110 350 aa11.17□□□□□ -0.62
HXT12YIL170W TRM44Q02648 567 aaKnown RBP11.17□□□□□ -0.62
HXT12YIL170W PUS5Q06244 254 aa11.17□□□□□ -0.62
HXT12YIL170W AFG2P32794 780 aa11.16□□□□□ -0.62
HXT12YIL170W SEN54Q02825 467 aaPredicted RBP11.16□□□□□ -0.62
HXT12YIL170W IRC4Q03036 179 aa11.16□□□□□ -0.62
HXT12YIL170W RRG1Q12167 365 aaPredicted RBP11.16□□□□□ -0.62
HXT12YIL170W DUR1,2P32528 1835 aaKnown RBP11.16□□□□□ -0.62
HXT12YIL170W FET4P40988 552 aa11.16□□□□□ -0.62
HXT12YIL170W SSA4P22202 642 aaKnown RBP11.15□□□□□ -0.63
HXT12YIL170W RTG2P32608 588 aaKnown RBP11.15□□□□□ -0.63
HXT12YIL170W PEX21P50091 288 aa11.15□□□□□ -0.63
HXT12YIL170W VPS4P52917 437 aa11.15□□□□□ -0.63
HXT12YIL170W TOS4Q06266 489 aa11.15□□□□□ -0.63
HXT12YIL170W RRI2Q12348 645 aa11.15□□□□□ -0.63
HXT12YIL170W SEC18P18759 758 aaKnown RBP11.14□□□□□ -0.63
HXT12YIL170W SSF1P38789 453 aaPredicted RBP11.14□□□□□ -0.63
HXT12YIL170W GYP5Q12344 894 aa11.14□□□□□ -0.63
HXT12YIL170W LCB1P25045 558 aaKnown RBP11.13□□□□□ -0.63
HXT12YIL170W GCD7P32502 381 aaPredicted RBP11.13□□□□□ -0.63
HXT12YIL170W NMD2P38798 1089 aaKnown RBP11.13□□□□□ -0.63
HXT12YIL170W NCB2Q92317 146 aa11.13□□□□□ -0.63
HXT12YIL170W AI2P03876 854 aa11.12□□□□□ -0.63
HXT12YIL170W RPT3P33298 428 aaKnown RBP11.12□□□□□ -0.63
HXT12YIL170W STV1P37296 890 aa11.12□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms