RNA–Protein interactions for RNA: YIL170W

HXT12, Transcript of Possible pseudogene in strain S288C, yeast

Gene HXT12, Length 1,374 nt, Biotype pseudogene, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HXT12	YIL170W	HAT1	Q12341	374 aa		11.42	□□□□□ -0.58
HXT12	YIL170W	TOP1	P04786	769 aa		11.41	□□□□□ -0.58
HXT12	YIL170W	RPN1	P38764	993 aa	Known RBP	11.41	□□□□□ -0.58
HXT12	YIL170W	YDR306C	Q06640	478 aa		11.41	□□□□□ -0.58
HXT12	YIL170W	MAK21	Q12176	1025 aa	Known RBP	11.41	□□□□□ -0.58
HXT12	YIL170W	DAL5	P15365	543 aa		11.4	□□□□□ -0.59
HXT12	YIL170W	SWC3	P31376	625 aa		11.4	□□□□□ -0.59
HXT12	YIL170W	SAS4	Q04003	481 aa		11.4	□□□□□ -0.59
HXT12	YIL170W	FRD1	P32614	470 aa	Known RBP	11.39	□□□□□ -0.59
HXT12	YIL170W	RAD24	P32641	659 aa		11.39	□□□□□ -0.59
HXT12	YIL170W	FUN12	P39730	1002 aa	Known RBP	11.39	□□□□□ -0.59
HXT12	YIL170W	ERO1	Q03103	563 aa		11.39	□□□□□ -0.59
HXT12	YIL170W	ICL1	P28240	557 aa	Predicted RBP	11.38	□□□□□ -0.59
HXT12	YIL170W	PRS1	P32895	427 aa	Known RBP	11.37	□□□□□ -0.59
HXT12	YIL170W	TFA1	P36100	482 aa		11.37	□□□□□ -0.59
HXT12	YIL170W	YPP1	P46951	817 aa		11.37	□□□□□ -0.59
HXT12	YIL170W	SSK22	P25390	1331 aa	Predicted RBP	11.37	□□□□□ -0.59
HXT12	YIL170W	SIT4	P20604	311 aa		11.36	□□□□□ -0.59
HXT12	YIL170W	SYF1	Q04048	859 aa	Predicted RBP	11.36	□□□□□ -0.59
HXT12	YIL170W	CSI1	Q04368	295 aa		11.36	□□□□□ -0.59
HXT12	YIL170W	ITC1	P53125	1264 aa		11.35	□□□□□ -0.59
HXT12	YIL170W	UBP16	Q02863	499 aa		11.35	□□□□□ -0.59
HXT12	YIL170W	PSH1	Q12161	406 aa		11.35	□□□□□ -0.59
HXT12	YIL170W	YKU70	P32807	602 aa		11.33	□□□□□ -0.6
HXT12	YIL170W	YJR008W	P47085	338 aa		11.33	□□□□□ -0.6
HXT12	YIL170W	YIL092W	P40497	633 aa		11.32	□□□□□ -0.6
HXT12	YIL170W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.32	□□□□□ -0.6	not detected
HXT12	YIL170W	GRX6	Q12438	231 aa		11.32	□□□□□ -0.6
HXT12	YIL170W	RAD2	P07276	1031 aa		11.31	□□□□□ -0.6
HXT12	YIL170W	NOP2	P40991	618 aa	Known RBP	11.31	□□□□□ -0.6
HXT12	YIL170W	YRB30	P53107	440 aa	Predicted RBP	11.31	□□□□□ -0.6
HXT12	YIL170W	SLI15	P38283	698 aa		11.3	□□□□□ -0.6
HXT12	YIL170W	UBP12	P39538	1254 aa		11.29	□□□□□ -0.6
HXT12	YIL170W	BOI2	P39969	1040 aa		11.29	□□□□□ -0.6
HXT12	YIL170W	FAS2	P19097	1887 aa	Known RBP	11.29	□□□□□ -0.6
HXT12	YIL170W	TRP5	P00931	707 aa	Known RBP	11.28	□□□□□ -0.6
HXT12	YIL170W	RET1	P22276	1149 aa	Known RBP	11.28	□□□□□ -0.6
HXT12	YIL170W	SET1	P38827	1080 aa	Known RBP	11.28	□□□□□ -0.6
HXT12	YIL170W	HXT10	P43581	546 aa		11.28	□□□□□ -0.6
HXT12	YIL170W	DPH6	Q12429	685 aa		11.28	□□□□□ -0.6
HXT12	YIL170W	NGR1	P32831	672 aa	Known RBP	11.28	□□□□□ -0.6
HXT12	YIL170W	SUP35	P05453	685 aa	Known RBP	11.27	□□□□□ -0.61
HXT12	YIL170W	FPK1	P53739	893 aa		11.27	□□□□□ -0.61
HXT12	YIL170W	THI3	Q07471	609 aa		11.27	□□□□□ -0.61
HXT12	YIL170W	SNU66	Q12420	587 aa	Predicted RBP	11.27	□□□□□ -0.61
HXT12	YIL170W	YNG2	P38806	282 aa	Known RBP	11.26	□□□□□ -0.61
HXT12	YIL170W	SHC1	P39000	512 aa		11.26	□□□□□ -0.61
HXT12	YIL170W	ATG20	Q07528	640 aa		11.26	□□□□□ -0.61
HXT12	YIL170W	RPS19A	P07280	144 aa	Known RBP	11.25	□□□□□ -0.61
HXT12	YIL170W	RPS19B	P07281	144 aa	Predicted RBP	11.25	□□□□□ -0.61
HXT12	YIL170W	MGM1	P32266	881 aa		11.25	□□□□□ -0.61
HXT12	YIL170W	ICP55	P40051	511 aa		11.25	□□□□□ -0.61
HXT12	YIL170W	RPT4	P53549	437 aa	Known RBP	11.25	□□□□□ -0.61
HXT12	YIL170W	SPO1	P53541	631 aa		11.24	□□□□□ -0.61
HXT12	YIL170W	MTC5	Q03897	1148 aa		11.24	□□□□□ -0.61
HXT12	YIL170W	SAC3	P46674	1301 aa		11.23	□□□□□ -0.61
HXT12	YIL170W	HKR1	P41809	1802 aa		11.23	□□□□□ -0.61
HXT12	YIL170W	SLA1	P32790	1244 aa		11.23	□□□□□ -0.61
HXT12	YIL170W	TIF4632	P39936	914 aa	Known RBP	11.23	□□□□□ -0.61
HXT12	YIL170W	SET4	P42948	560 aa		11.23	□□□□□ -0.61
HXT12	YIL170W	SRC1	Q03707	834 aa		11.23	□□□□□ -0.61
HXT12	YIL170W	DIP2	Q12220	943 aa	Predicted RBP	11.23	□□□□□ -0.61
HXT12	YIL170W	THS1	P04801	734 aa	Known RBP	11.22	□□□□□ -0.61
HXT12	YIL170W	KRE2	P27809	442 aa		11.22	□□□□□ -0.61
HXT12	YIL170W	GSM1	P42950	618 aa		11.22	□□□□□ -0.61
HXT12	YIL170W	DPL1	Q05567	589 aa		11.22	□□□□□ -0.61
HXT12	YIL170W	PUF6	Q04373	656 aa	Known RBP	11.21	□□□□□ -0.61
HXT12	YIL170W	RPS9B	P05755	195 aa	Known RBP	11.2	□□□□□ -0.62
HXT12	YIL170W	MSM1	P22438	575 aa		11.2	□□□□□ -0.62
HXT12	YIL170W	SPL2	P38839	148 aa		11.2	□□□□□ -0.62
HXT12	YIL170W	ILV3	P39522	585 aa	Known RBP	11.19	□□□□□ -0.62
HXT12	YIL170W	GAP1	P19145	602 aa	Predicted RBP	11.18	□□□□□ -0.62
HXT12	YIL170W	UBX2	Q04228	584 aa		11.18	□□□□□ -0.62
HXT12	YIL170W	GAS5	Q08193	484 aa		11.18	□□□□□ -0.62
HXT12	YIL170W	AIM7	Q12156	149 aa		11.18	□□□□□ -0.62
HXT12	YIL170W	POL32	P47110	350 aa		11.17	□□□□□ -0.62
HXT12	YIL170W	TRM44	Q02648	567 aa	Known RBP	11.17	□□□□□ -0.62
HXT12	YIL170W	PUS5	Q06244	254 aa		11.17	□□□□□ -0.62
HXT12	YIL170W	AFG2	P32794	780 aa		11.16	□□□□□ -0.62
HXT12	YIL170W	SEN54	Q02825	467 aa	Predicted RBP	11.16	□□□□□ -0.62
HXT12	YIL170W	IRC4	Q03036	179 aa		11.16	□□□□□ -0.62
HXT12	YIL170W	RRG1	Q12167	365 aa	Predicted RBP	11.16	□□□□□ -0.62
HXT12	YIL170W	DUR1,2	P32528	1835 aa	Known RBP	11.16	□□□□□ -0.62
HXT12	YIL170W	FET4	P40988	552 aa		11.16	□□□□□ -0.62
HXT12	YIL170W	SSA4	P22202	642 aa	Known RBP	11.15	□□□□□ -0.63
HXT12	YIL170W	RTG2	P32608	588 aa	Known RBP	11.15	□□□□□ -0.63
HXT12	YIL170W	PEX21	P50091	288 aa		11.15	□□□□□ -0.63
HXT12	YIL170W	VPS4	P52917	437 aa		11.15	□□□□□ -0.63
HXT12	YIL170W	TOS4	Q06266	489 aa		11.15	□□□□□ -0.63
HXT12	YIL170W	RRI2	Q12348	645 aa		11.15	□□□□□ -0.63
HXT12	YIL170W	SEC18	P18759	758 aa	Known RBP	11.14	□□□□□ -0.63
HXT12	YIL170W	SSF1	P38789	453 aa	Predicted RBP	11.14	□□□□□ -0.63
HXT12	YIL170W	GYP5	Q12344	894 aa		11.14	□□□□□ -0.63
HXT12	YIL170W	LCB1	P25045	558 aa	Known RBP	11.13	□□□□□ -0.63
HXT12	YIL170W	GCD7	P32502	381 aa	Predicted RBP	11.13	□□□□□ -0.63
HXT12	YIL170W	NMD2	P38798	1089 aa	Known RBP	11.13	□□□□□ -0.63
HXT12	YIL170W	NCB2	Q92317	146 aa		11.13	□□□□□ -0.63
HXT12	YIL170W	AI2	P03876	854 aa		11.12	□□□□□ -0.63
HXT12	YIL170W	RPT3	P33298	428 aa	Known RBP	11.12	□□□□□ -0.63
HXT12	YIL170W	STV1	P37296	890 aa		11.12	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms