RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W ERB1Q04660 807 aaKnown RBP2.71□□□□□ -1.98
TRA1YHR099W SSA2P10592 639 aaKnown RBP2.71□□□□□ -1.98
TRA1YHR099W SPT16P32558 1035 aaKnown RBP2.71□□□□□ -1.98
TRA1YHR099W SDA1P53313 767 aaKnown RBP2.71□□□□□ -1.98
TRA1YHR099W SEN54Q02825 467 aaPredicted RBP2.71□□□□□ -1.98
TRA1YHR099W BRR1Q99177 341 aaPredicted RBP2.71□□□□□ -1.98
TRA1YHR099W UBX2Q04228 584 aa2.71□□□□□ -1.98
TRA1YHR099W YMR196WQ04336 1088 aa2.71□□□□□ -1.98
TRA1YHR099W HDA3Q06623 655 aa2.71□□□□□ -1.98
TRA1YHR099W ARD1P07347 238 aaPredicted RBP2.71□□□□□ -1.98
TRA1YHR099W VAS1P07806 1104 aaKnown RBP2.71□□□□□ -1.98
TRA1YHR099W SPT8P38915 602 aa2.71□□□□□ -1.98
TRA1YHR099W ATG38Q05789 226 aaKnown RBP2.71□□□□□ -1.98
TRA1YHR099W RTP1Q12751 981 aa2.71□□□□□ -1.98
TRA1YHR099W SIN3P22579 1536 aa2.71□□□□□ -1.98
TRA1YHR099W SEC9P40357 651 aa2.71□□□□□ -1.98
TRA1YHR099W IAH1P41734 238 aa2.71□□□□□ -1.98
TRA1YHR099W DID2P69771 204 aa2.71□□□□□ -1.98
TRA1YHR099W ADY3Q07732 790 aa2.71□□□□□ -1.98
TRA1YHR099W ZEO1Q08245 113 aa2.71□□□□□ -1.98
TRA1YHR099W NOT5Q12514 560 aaPredicted RBP2.71□□□□□ -1.98
TRA1YHR099W MRD1Q06106 887 aaKnown RBP2.71□□□□□ -1.98
TRA1YHR099W HSL1P34244 1518 aa2.71□□□□□ -1.98
TRA1YHR099W ATP3P38077 311 aaKnown RBP2.71□□□□□ -1.98
TRA1YHR099W MAM1P40065 302 aa2.71□□□□□ -1.98
TRA1YHR099W TY4A-HQ6Q5P6 413 aa2.71□□□□□ -1.98
TRA1YHR099W VPS5Q92331 675 aa2.71□□□□□ -1.98
TRA1YHR099W YNR021WP53723 404 aaKnown RBP2.71□□□□□ -1.98
TRA1YHR099W SNX41Q04053 625 aa2.71□□□□□ -1.98
TRA1YHR099W LCD1Q04377 747 aa2.71□□□□□ -1.98
TRA1YHR099W HCR1Q05775 265 aaKnown RBP2.71□□□□□ -1.98
TRA1YHR099W MLC2Q06580 163 aa2.71□□□□□ -1.98
TRA1YHR099W MAK21Q12176 1025 aaKnown RBP2.71□□□□□ -1.98
TRA1YHR099W IMP2'P32351 346 aa2.7□□□□□ -1.98
TRA1YHR099W MDV1P47025 714 aa2.7□□□□□ -1.98
TRA1YHR099W MRC1P25588 1096 aa2.7□□□□□ -1.98
TRA1YHR099W ARB1P40024 610 aaKnown RBP2.7□□□□□ -1.98
TRA1YHR099W TSC11P40061 1430 aa2.7□□□□□ -1.98
TRA1YHR099W UTP9P38882 575 aaKnown RBP2.7□□□□□ -1.98
TRA1YHR099W GCN20P43535 752 aaKnown RBP2.7□□□□□ -1.98
TRA1YHR099W NOP9P47077 666 aaKnown RBP2.7□□□□□ -1.98
TRA1YHR099W SRB7P47822 140 aa2.7□□□□□ -1.98
TRA1YHR099W DBP6P53734 629 aaKnown RBP2.7□□□□□ -1.98
TRA1YHR099W CEF1Q03654 590 aaPredicted RBP2.7□□□□□ -1.98
TRA1YHR099W UTP14Q04500 899 aaKnown RBP2.7□□□□□ -1.98
TRA1YHR099W MET7Q08645 548 aa2.7□□□□□ -1.98
TRA1YHR099W ZRT2Q12436 422 aa2.7□□□□□ -1.98
TRA1YHR099W NBL1Q3E7Y6 73 aa2.7□□□□□ -1.98
TRA1YHR099W GEA1P47102 1408 aaPredicted RBP2.7□□□□□ -1.98
TRA1YHR099W MDS3P53094 1487 aa2.7□□□□□ -1.98
TRA1YHR099W PWP2P25635 923 aaKnown RBP2.7□□□□□ -1.98
TRA1YHR099W ISW1P38144 1129 aa2.7□□□□□ -1.98
TRA1YHR099W LSO1Q3E827 93 aa2.7□□□□□ -1.98
TRA1YHR099W NCB2Q92317 146 aa2.7□□□□□ -1.98
TRA1YHR099W RPP0P05317 312 aaKnown RBP2.7□□□□□ -1.98
TRA1YHR099W MSH1P25846 959 aa2.7□□□□□ -1.98
TRA1YHR099W NUP60P39705 539 aa2.7□□□□□ -1.98
TRA1YHR099W OCA1P50946 238 aaPredicted RBP2.7□□□□□ -1.98
TRA1YHR099W RTF1P53064 558 aa2.7□□□□□ -1.98
TRA1YHR099W VPS9P54787 451 aa2.7□□□□□ -1.98
TRA1YHR099W RRP8P38961 392 aaKnown RBP2.7□□□□□ -1.98
TRA1YHR099W MAM33P40513 266 aa2.7□□□□□ -1.98
TRA1YHR099W YLF2P38746 405 aa2.7□□□□□ -1.98
TRA1YHR099W YHR078WP38799 552 aa2.7□□□□□ -1.98
TRA1YHR099W VID28P40547 921 aa2.7□□□□□ -1.98
TRA1YHR099W RPL6AQ02326 176 aaKnown RBP2.7□□□□□ -1.98
TRA1YHR099W SDH5Q08230 162 aa2.7□□□□□ -1.98
TRA1YHR099W OTU2P38747 307 aaKnown RBP2.7□□□□□ -1.98
TRA1YHR099W MGR3Q04472 501 aa2.7□□□□□ -1.98
TRA1YHR099W SBA1P28707 216 aaKnown RBP2.69□□□□□ -1.98
TRA1YHR099W YPK9Q12697 1472 aa2.69□□□□□ -1.98
TRA1YHR099W GCD6P32501 712 aaKnown RBP2.69□□□□□ -1.98
TRA1YHR099W ACL4Q03771 387 aa2.69□□□□□ -1.98
TRA1YHR099W YMR226CQ05016 267 aaKnown RBP2.69□□□□□ -1.98
TRA1YHR099W SIR1P21691 654 aa2.69□□□□□ -1.98
TRA1YHR099W DID4P36108 232 aa2.69□□□□□ -1.98
TRA1YHR099W TAF8Q03750 510 aa2.69□□□□□ -1.98
TRA1YHR099W YRF1-4O13559 1382 aa2.69□□□□□ -1.98
TRA1YHR099W PDR18P53756 1333 aa2.69□□□□□ -1.98
TRA1YHR099W CBF2P32504 956 aa2.69□□□□□ -1.98
TRA1YHR099W RSM25P40496 264 aa2.69□□□□□ -1.98
TRA1YHR099W OSW7P43611 510 aa2.69□□□□□ -1.98
TRA1YHR099W MRX12P47084 519 aa2.69□□□□□ -1.98
TRA1YHR099W CLF1Q12309 687 aaPredicted RBP2.69□□□□□ -1.98
TRA1YHR099W EFB1P32471 206 aaKnown RBP2.69□□□□□ -1.98
TRA1YHR099W PEX5P35056 612 aa2.69□□□□□ -1.98
TRA1YHR099W VTC3Q02725 835 aa2.69□□□□□ -1.98
TRA1YHR099W SUP45P12385 437 aaKnown RBP2.69□□□□□ -1.98
TRA1YHR099W KGD2P19262 463 aaPredicted RBP2.69□□□□□ -1.98
TRA1YHR099W SEC14P24280 304 aaKnown RBP2.69□□□□□ -1.98
TRA1YHR099W SSE2P32590 693 aaKnown RBP2.69□□□□□ -1.98
TRA1YHR099W TIF11P38912 153 aaKnown RBP2.69□□□□□ -1.98
TRA1YHR099W RPN11P43588 306 aaKnown RBP2.69□□□□□ -1.98
TRA1YHR099W NNF2P53253 936 aa2.69□□□□□ -1.98
TRA1YHR099W TMA17Q12513 150 aa2.69□□□□□ -1.98
TRA1YHR099W HSP78P33416 811 aa2.69□□□□□ -1.98
TRA1YHR099W FYV8P46949 817 aaKnown RBP2.69□□□□□ -1.98
TRA1YHR099W VPS30Q02948 557 aa2.69□□□□□ -1.98
TRA1YHR099W ACP1P32463 125 aa2.69□□□□□ -1.98
TRA1YHR099W INA22P40576 216 aa2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms