RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W FIG2P25653 1609 aa11.66□□□□□ -0.54
CPD1YGR247W GAP1P19145 602 aaPredicted RBP11.65□□□□□ -0.54
CPD1YGR247W APL2P36000 726 aaPredicted RBP11.65□□□□□ -0.54
CPD1YGR247W PEA2P40091 420 aa11.64□□□□□ -0.55
CPD1YGR247W LYS2P07702 1392 aa11.63□□□□□ -0.55
CPD1YGR247W TOM1Q03280 3268 aa11.62□□□□□ -0.55
CPD1YGR247W RRP46P53256 223 aaPredicted RBP11.62□□□□□ -0.55
CPD1YGR247W TYW1Q08960 810 aaKnown RBP11.62□□□□□ -0.55
CPD1YGR247W EMP47P43555 445 aa11.61□□□□□ -0.55
CPD1YGR247W YGR117CP53270 476 aa11.6□□□□□ -0.55
CPD1YGR247W TRM44Q02648 567 aaKnown RBP11.6□□□□□ -0.55
CPD1YGR247W VPS64Q03944 604 aa11.6□□□□□ -0.55
CPD1YGR247W SRF1Q12516 437 aa11.6□□□□□ -0.55
CPD1YGR247W TIF4632P39936 914 aaKnown RBP11.59□□□□□ -0.55
CPD1YGR247W CWC15Q03772 175 aaKnown RBP11.59□□□□□ -0.55
CPD1YGR247W TIF6Q12522 245 aaKnown RBP11.59□□□□□ -0.55
CPD1YGR247W HKR1P41809 1802 aa11.58□□□□□ -0.56
CPD1YGR247W SDH2P21801 266 aa11.58□□□□□ -0.56
CPD1YGR247W ZDS1P50111 915 aaKnown RBP11.58□□□□□ -0.56
CPD1YGR247W ZDS2P54786 942 aa11.56□□□□□ -0.56
CPD1YGR247W CRF1Q04930 467 aa11.56□□□□□ -0.56
CPD1YGR247W MAM1P40065 302 aa11.55□□□□□ -0.56
CPD1YGR247W VPS4P52917 437 aa11.55□□□□□ -0.56
CPD1YGR247W YLR271WQ06152 274 aa11.55□□□□□ -0.56
CPD1YGR247W HPR1P17629 752 aaKnown RBP11.54□□□□□ -0.56
CPD1YGR247W SET4P42948 560 aa11.54□□□□□ -0.56
CPD1YGR247W COQ4O13525 335 aa11.53□□□□□ -0.56
CPD1YGR247W NSR1P27476 414 aaKnown RBP RIP-Chip data11.53□□□□□ -0.56 RIP-Chip
CPD1YGR247W BSD2P38356 321 aa11.53□□□□□ -0.56
CPD1YGR247W PKH1Q03407 766 aa11.53□□□□□ -0.56
CPD1YGR247W BMS1Q08965 1183 aaKnown RBP11.53□□□□□ -0.56
CPD1YGR247W RRG1Q12167 365 aaPredicted RBP11.53□□□□□ -0.56
CPD1YGR247W PRD1P25375 712 aa11.52□□□□□ -0.57
CPD1YGR247W AFG2P32794 780 aa11.52□□□□□ -0.57
CPD1YGR247W RTR1P40084 226 aaPredicted RBP11.52□□□□□ -0.57
CPD1YGR247W UBX2Q04228 584 aa11.52□□□□□ -0.57
CPD1YGR247W HVG1P0CE11 249 aa11.51□□□□□ -0.57
CPD1YGR247W KRE2P27809 442 aa11.51□□□□□ -0.57
CPD1YGR247W GAS5Q08193 484 aa11.51□□□□□ -0.57
CPD1YGR247W STV1P37296 890 aa11.5□□□□□ -0.57
CPD1YGR247W DPH6Q12429 685 aa11.5□□□□□ -0.57
CPD1YGR247W TRP5P00931 707 aaKnown RBP11.49□□□□□ -0.57
CPD1YGR247W MAC1P35192 417 aa11.49□□□□□ -0.57
CPD1YGR247W YOL057WQ08225 711 aa11.49□□□□□ -0.57
CPD1YGR247W ICP55P40051 511 aa11.48□□□□□ -0.57
CPD1YGR247W NCS6P53088 359 aa11.48□□□□□ -0.57
CPD1YGR247W DNM1P54861 757 aa11.48□□□□□ -0.57
CPD1YGR247W CSR2Q12734 1121 aa11.48□□□□□ -0.57
CPD1YGR247W YBR287WP38355 427 aa11.47□□□□□ -0.57
CPD1YGR247W RRT6P53117 311 aaPredicted RBP11.47□□□□□ -0.57
CPD1YGR247W FCP1Q03254 732 aa11.47□□□□□ -0.57
CPD1YGR247W IOC4Q04213 475 aa11.46□□□□□ -0.57
CPD1YGR247W CST9Q06032 482 aa11.46□□□□□ -0.57
CPD1YGR247W SEN54Q02825 467 aaPredicted RBP11.45□□□□□ -0.58
CPD1YGR247W PCS60P38137 543 aaKnown RBP RIP-Chip data11.44□□□□□ -0.58not detected
CPD1YGR247W GYP7P48365 746 aa11.44□□□□□ -0.58
CPD1YGR247W SWI1P09547 1314 aa11.43□□□□□ -0.58
CPD1YGR247W PNT1P38969 423 aa11.43□□□□□ -0.58
CPD1YGR247W CST6P40535 587 aa11.43□□□□□ -0.58
CPD1YGR247W RPT4P53549 437 aaKnown RBP11.43□□□□□ -0.58
CPD1YGR247W CBP1P07252 654 aa11.42□□□□□ -0.58
CPD1YGR247W RSC30P38781 883 aa11.42□□□□□ -0.58
CPD1YGR247W GSM1P42950 618 aa11.42□□□□□ -0.58
CPD1YGR247W YJR008WP47085 338 aa11.42□□□□□ -0.58
CPD1YGR247W PSD2P53037 1138 aaKnown RBP11.42□□□□□ -0.58
CPD1YGR247W PIB1Q06651 286 aa11.42□□□□□ -0.58
CPD1YGR247W SPL2P38839 148 aa11.41□□□□□ -0.58
CPD1YGR247W PRP42Q03776 544 aaKnown RBP11.41□□□□□ -0.58
CPD1YGR247W THI22Q06490 572 aa11.41□□□□□ -0.58
CPD1YGR247W MOT2P34909 587 aaKnown RBP11.4□□□□□ -0.58
CPD1YGR247W APE3P37302 537 aaKnown RBP11.4□□□□□ -0.58
CPD1YGR247W FLO11P08640 1367 aa11.4□□□□□ -0.59
CPD1YGR247W SAC3P46674 1301 aa11.39□□□□□ -0.59
CPD1YGR247W MGM1P32266 881 aa11.39□□□□□ -0.59
CPD1YGR247W YDR306CQ06640 478 aa11.39□□□□□ -0.59
CPD1YGR247W THI3Q07471 609 aa11.38□□□□□ -0.59
CPD1YGR247W RTT109Q07794 436 aa11.38□□□□□ -0.59
CPD1YGR247W NGR1P32831 672 aaKnown RBP11.37□□□□□ -0.59
CPD1YGR247W NUP133P36161 1157 aa11.37□□□□□ -0.59
CPD1YGR247W SET1P38827 1080 aaKnown RBP11.37□□□□□ -0.59
CPD1YGR247W ITC1P53125 1264 aa11.37□□□□□ -0.59
CPD1YGR247W GSC2P40989 1895 aa11.36□□□□□ -0.59
CPD1YGR247W RBA50Q04418 439 aa11.36□□□□□ -0.59
CPD1YGR247W UTP7P40055 554 aaKnown RBP11.35□□□□□ -0.59
CPD1YGR247W PSH1Q12161 406 aa11.34□□□□□ -0.59
CPD1YGR247W ARG82P07250 355 aa11.33□□□□□ -0.6
CPD1YGR247W MRP7P12687 371 aa11.33□□□□□ -0.6
CPD1YGR247W PAM1P37304 830 aaKnown RBP11.33□□□□□ -0.6
CPD1YGR247W MPP10P47083 593 aaKnown RBP11.33□□□□□ -0.6
CPD1YGR247W MTC3P53077 123 aa11.33□□□□□ -0.6
CPD1YGR247W IRC4Q03036 179 aa11.33□□□□□ -0.6
CPD1YGR247W SRT1Q03175 343 aa11.33□□□□□ -0.6
CPD1YGR247W TOS4Q06266 489 aa11.33□□□□□ -0.6
CPD1YGR247W ACK1Q07622 623 aaPredicted RBP11.33□□□□□ -0.6
CPD1YGR247W GAL2P13181 574 aa11.32□□□□□ -0.6
CPD1YGR247W LCB1P25045 558 aaKnown RBP11.32□□□□□ -0.6
CPD1YGR247W RPS7AP26786 190 aaKnown RBP11.32□□□□□ -0.6
CPD1YGR247W NIT1P40447 199 aa11.32□□□□□ -0.6
CPD1YGR247W SRC1Q03707 834 aa11.32□□□□□ -0.6
CPD1YGR247W MTC5Q03897 1148 aa11.31□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 87.4 ms