RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W PSH1Q12161 406 aa4.36□□□□□ -1.71
CAF130YGR134W YKL069WP36088 180 aa4.35□□□□□ -1.71
CAF130YGR134W NUP82P40368 713 aa4.35□□□□□ -1.71
CAF130YGR134W YGR021WP53212 290 aa4.35□□□□□ -1.71
CAF130YGR134W SNU66Q12420 587 aaPredicted RBP4.35□□□□□ -1.71
CAF130YGR134W TRX2P22803 104 aaKnown RBP4.35□□□□□ -1.71
CAF130YGR134W RAD27P26793 382 aa4.35□□□□□ -1.71
CAF130YGR134W RRP8P38961 392 aaKnown RBP4.35□□□□□ -1.71
CAF130YGR134W ECM16Q04217 1267 aaKnown RBP4.35□□□□□ -1.71
CAF130YGR134W YOL036WQ08206 761 aa4.35□□□□□ -1.71
CAF130YGR134W MRC1P25588 1096 aa4.34□□□□□ -1.71
CAF130YGR134W STE5P32917 917 aa4.34□□□□□ -1.71
CAF130YGR134W ERP2P39704 215 aa4.34□□□□□ -1.71
CAF130YGR134W SNF7P39929 240 aaKnown RBP4.34□□□□□ -1.71
CAF130YGR134W TRS120Q04183 1289 aa4.34□□□□□ -1.71
CAF130YGR134W HXK1P04806 485 aaKnown RBP4.34□□□□□ -1.71
CAF130YGR134W MPH2P0CD99 609 aa4.34□□□□□ -1.71
CAF130YGR134W MPH3P0CE00 602 aa4.34□□□□□ -1.71
CAF130YGR134W ISF1P32488 338 aa4.34□□□□□ -1.71
CAF130YGR134W SCY1P53009 804 aa4.34□□□□□ -1.71
CAF130YGR134W FRA1Q07825 749 aa4.34□□□□□ -1.71
CAF130YGR134W FAP1P53971 965 aa4.34□□□□□ -1.72
CAF130YGR134W YOR238WQ08634 303 aa4.34□□□□□ -1.72
CAF130YGR134W RRI2Q12348 645 aa4.34□□□□□ -1.72
CAF130YGR134W RPL8AP17076 256 aaKnown RBP4.33□□□□□ -1.72
CAF130YGR134W ARG8P18544 423 aa4.33□□□□□ -1.72
CAF130YGR134W RPT1P33299 467 aaKnown RBP4.33□□□□□ -1.72
CAF130YGR134W MGE1P38523 228 aa4.33□□□□□ -1.72
CAF130YGR134W VPS27P40343 622 aaKnown RBP4.33□□□□□ -1.72
CAF130YGR134W YGR122WP53272 402 aa4.33□□□□□ -1.72
CAF130YGR134W VPS5Q92331 675 aa4.33□□□□□ -1.72
CAF130YGR134W KAR1P11927 433 aa4.33□□□□□ -1.72
CAF130YGR134W CEF1Q03654 590 aaPredicted RBP4.33□□□□□ -1.72
CAF130YGR134W MNR2P35724 969 aa4.33□□□□□ -1.72
CAF130YGR134W RTT106P40161 455 aa4.33□□□□□ -1.72
CAF130YGR134W AGE1Q04412 482 aa4.33□□□□□ -1.72
CAF130YGR134W UBP1P25037 809 aa4.32□□□□□ -1.72
CAF130YGR134W RPS0AP32905 252 aaKnown RBP4.32□□□□□ -1.72
CAF130YGR134W SPF1P39986 1215 aaKnown RBP4.32□□□□□ -1.72
CAF130YGR134W RPT2P40327 437 aaKnown RBP4.32□□□□□ -1.72
CAF130YGR134W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
CAF130YGR134W YJR120WP47157 116 aa4.32□□□□□ -1.72
CAF130YGR134W CDC53Q12018 815 aaKnown RBP4.32□□□□□ -1.72
CAF130YGR134W SIN3P22579 1536 aa4.32□□□□□ -1.72
CAF130YGR134W SLI15P38283 698 aa4.32□□□□□ -1.72
CAF130YGR134W YPP1P46951 817 aa4.32□□□□□ -1.72
CAF130YGR134W YPR109WQ06104 294 aa4.32□□□□□ -1.72
CAF130YGR134W NOP14Q99207 810 aaKnown RBP4.32□□□□□ -1.72
CAF130YGR134W ERR1P0CX10 437 aa4.31□□□□□ -1.72
CAF130YGR134W ERR2P0CX11 437 aa4.31□□□□□ -1.72
CAF130YGR134W KTR7P40504 517 aa4.31□□□□□ -1.72
CAF130YGR134W YRR1Q12172 810 aa4.31□□□□□ -1.72
CAF130YGR134W AI4P03878 556 aa4.31□□□□□ -1.72
CAF130YGR134W MET6P05694 767 aaKnown RBP4.31□□□□□ -1.72
CAF130YGR134W TUB4P53378 473 aa4.31□□□□□ -1.72
CAF130YGR134W UTP14Q04500 899 aaKnown RBP4.31□□□□□ -1.72
CAF130YGR134W CIT1P00890 479 aa4.31□□□□□ -1.72
CAF130YGR134W HAL5P38970 855 aaKnown RBP4.31□□□□□ -1.72
CAF130YGR134W RPS26AP39938 119 aaKnown RBP4.31□□□□□ -1.72
CAF130YGR134W RPS26BP39939 119 aaKnown RBP4.31□□□□□ -1.72
CAF130YGR134W PFD1P46988 109 aa4.31□□□□□ -1.72
CAF130YGR134W ESF2P53743 316 aaKnown RBP4.31□□□□□ -1.72
CAF130YGR134W UTP13Q05946 817 aaKnown RBP4.31□□□□□ -1.72
CAF130YGR134W TRM1P15565 570 aaKnown RBP4.3□□□□□ -1.72
CAF130YGR134W FAA3P39002 694 aa4.3□□□□□ -1.72
CAF130YGR134W GNP1P48813 663 aa4.3□□□□□ -1.72
CAF130YGR134W YGR161W-CQ3E744 92 aa4.3□□□□□ -1.72
CAF130YGR134W HSC82P15108 705 aaKnown RBP4.3□□□□□ -1.72
CAF130YGR134W MRF1P30775 413 aaPredicted RBP4.3□□□□□ -1.72
CAF130YGR134W CSC1Q06538 782 aa4.3□□□□□ -1.72
CAF130YGR134W GRE2Q12068 342 aaKnown RBP4.3□□□□□ -1.72
CAF130YGR134W HSL1P34244 1518 aa4.3□□□□□ -1.72
CAF130YGR134W HAP4P14064 554 aa4.3□□□□□ -1.72
CAF130YGR134W BUD31P25337 157 aaPredicted RBP4.3□□□□□ -1.72
CAF130YGR134W PUF4P25339 888 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
CAF130YGR134W MAP2P38174 421 aaKnown RBP4.3□□□□□ -1.72
CAF130YGR134W FAA4P47912 694 aaKnown RBP4.3□□□□□ -1.72
CAF130YGR134W ATP4P05626 244 aa4.29□□□□□ -1.72
CAF130YGR134W RAD4P14736 754 aa4.29□□□□□ -1.72
CAF130YGR134W COG6P53959 839 aa4.29□□□□□ -1.72
CAF130YGR134W CAB1Q04430 367 aa4.29□□□□□ -1.72
CAF130YGR134W ERP4Q12450 207 aa4.29□□□□□ -1.72
CAF130YGR134W SPT6P23615 1451 aaKnown RBP4.29□□□□□ -1.72
CAF130YGR134W CDC34P14682 295 aa4.29□□□□□ -1.72
CAF130YGR134W MFT1P33441 392 aaKnown RBP4.29□□□□□ -1.72
CAF130YGR134W MAL31P38156 614 aa4.29□□□□□ -1.72
CAF130YGR134W KIC1P38692 1080 aa4.29□□□□□ -1.72
CAF130YGR134W TSC13Q99190 310 aa4.29□□□□□ -1.72
CAF130YGR134W RSP5P39940 809 aaKnown RBP4.28□□□□□ -1.72
CAF130YGR134W VID27P40157 782 aa4.28□□□□□ -1.72
CAF130YGR134W BNA1P47096 177 aa4.28□□□□□ -1.72
CAF130YGR134W PSK2Q08217 1101 aa4.28□□□□□ -1.72
CAF130YGR134W SLX4Q12098 748 aa4.28□□□□□ -1.72
CAF130YGR134W MKK2P32491 506 aa4.28□□□□□ -1.72
CAF130YGR134W CRP1P38845 465 aaKnown RBP4.28□□□□□ -1.72
CAF130YGR134W NOC2P39744 710 aaKnown RBP4.28□□□□□ -1.72
CAF130YGR134W CHZ1P40019 153 aaPredicted RBP4.28□□□□□ -1.72
CAF130YGR134W GPP1P41277 250 aaKnown RBP4.28□□□□□ -1.72
CAF130YGR134W THI12P42883 340 aa4.28□□□□□ -1.72
CAF130YGR134W THI5P43534 340 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms