RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W FUR4P05316 633 aaKnown RBP10.58□□□□□ -0.72
LCP5YER127W ALD4P46367 519 aaKnown RBP10.58□□□□□ -0.72
LCP5YER127W HST3P53687 447 aa10.58□□□□□ -0.72
LCP5YER127W DPS1P04802 557 aaKnown RBP10.57□□□□□ -0.72
LCP5YER127W CDC4P07834 779 aa10.57□□□□□ -0.72
LCP5YER127W ERP5P38819 212 aa10.57□□□□□ -0.72
LCP5YER127W UTP7P40055 554 aaKnown RBP10.57□□□□□ -0.72
LCP5YER127W UBP1P25037 809 aa10.56□□□□□ -0.72
LCP5YER127W ASH1P34233 588 aa10.56□□□□□ -0.72
LCP5YER127W SUV3P32580 737 aa10.55□□□□□ -0.72
LCP5YER127W NGR1P32831 672 aaKnown RBP10.55□□□□□ -0.72
LCP5YER127W RTT106P40161 455 aa10.55□□□□□ -0.72
LCP5YER127W RRN6P32786 894 aa10.54□□□□□ -0.72
LCP5YER127W BOL3P39724 118 aa10.54□□□□□ -0.72
LCP5YER127W AFT1P22149 690 aa10.52□□□□□ -0.73
LCP5YER127W GRS1P38088 690 aaKnown RBP10.52□□□□□ -0.73
LCP5YER127W STM1P39015 273 aaKnown RBP10.5□□□□□ -0.73
LCP5YER127W TRL1P09880 827 aaKnown RBP10.49□□□□□ -0.73
LCP5YER127W GLO3P38682 493 aaKnown RBP10.49□□□□□ -0.73
LCP5YER127W SUM1P46676 1062 aa10.49□□□□□ -0.73
LCP5YER127W MSB3P48566 633 aaPredicted RBP10.49□□□□□ -0.73
LCP5YER127W SEN54Q02825 467 aaPredicted RBP10.49□□□□□ -0.73
LCP5YER127W ARG82P07250 355 aa10.48□□□□□ -0.73
LCP5YER127W ALA1P40825 983 aaKnown RBP10.48□□□□□ -0.73
LCP5YER127W FOX2Q02207 900 aaKnown RBP10.48□□□□□ -0.73
LCP5YER127W SRF1Q12516 437 aa10.47□□□□□ -0.73
LCP5YER127W YBR197CP38306 217 aa10.46□□□□□ -0.73
LCP5YER127W QDR1P40475 563 aa10.46□□□□□ -0.73
LCP5YER127W MDJ2P42834 146 aa10.46□□□□□ -0.73
LCP5YER127W ATG1P53104 897 aa10.46□□□□□ -0.73
LCP5YER127W ISC10P32645 267 aa10.45□□□□□ -0.74
LCP5YER127W AAD14P42884 376 aa10.45□□□□□ -0.74
LCP5YER127W YPQ2Q06328 317 aa10.45□□□□□ -0.74
LCP5YER127W HEM3P28789 327 aa10.44□□□□□ -0.74
LCP5YER127W YHL050CP38721 697 aa10.43□□□□□ -0.74
LCP5YER127W YHR219WP38900 624 aa10.43□□□□□ -0.74
LCP5YER127W IPL1P38991 367 aa10.43□□□□□ -0.74
LCP5YER127W SEC20P28791 383 aa10.42□□□□□ -0.74
LCP5YER127W PTK2P47116 818 aaKnown RBP10.42□□□□□ -0.74
LCP5YER127W YJR115WP47152 169 aa10.42□□□□□ -0.74
LCP5YER127W CAB1Q04430 367 aa10.42□□□□□ -0.74
LCP5YER127W LSO1Q3E827 93 aa10.42□□□□□ -0.74
LCP5YER127W MCM1P11746 286 aa10.41□□□□□ -0.74
LCP5YER127W MSC6Q08818 692 aaKnown RBP10.41□□□□□ -0.74
LCP5YER127W BOI1P38041 980 aaKnown RBP10.4□□□□□ -0.74
LCP5YER127W ACF4P47129 309 aa10.4□□□□□ -0.74
LCP5YER127W DLD1P32891 587 aa10.39□□□□□ -0.75
LCP5YER127W HXT5P38695 592 aa10.38□□□□□ -0.75
LCP5YER127W Q0182Q9ZZW1 134 aa10.38□□□□□ -0.75
LCP5YER127W SSN3P39073 555 aa10.37□□□□□ -0.75
LCP5YER127W THI12P42883 340 aa10.37□□□□□ -0.75
LCP5YER127W THI5P43534 340 aa10.37□□□□□ -0.75
LCP5YER127W THI11P47183 340 aa10.37□□□□□ -0.75
LCP5YER127W THI13Q07748 340 aa10.37□□□□□ -0.75
LCP5YER127W SCD5P34758 872 aa10.36□□□□□ -0.75
LCP5YER127W MRPL33P20084 86 aa10.34□□□□□ -0.75
LCP5YER127W NUT2Q06213 157 aa10.34□□□□□ -0.75
LCP5YER127W YNL165WP53891 406 aa10.33□□□□□ -0.76
LCP5YER127W TRK1P12685 1235 aa10.32□□□□□ -0.76
LCP5YER127W SPR3P41901 512 aa10.32□□□□□ -0.76
LCP5YER127W NUP85P46673 744 aa10.32□□□□□ -0.76
LCP5YER127W MSN5P52918 1224 aa10.32□□□□□ -0.76
LCP5YER127W SUT1P53032 299 aaKnown RBP10.32□□□□□ -0.76
LCP5YER127W LSC2P53312 427 aa10.32□□□□□ -0.76
LCP5YER127W AHP1P38013 176 aaKnown RBP10.31□□□□□ -0.76
LCP5YER127W JJJ2P46997 583 aa10.31□□□□□ -0.76
LCP5YER127W FRT1Q99332 602 aa10.31□□□□□ -0.76
LCP5YER127W MLF3P32047 452 aa10.3□□□□□ -0.76
LCP5YER127W YTA6P40328 754 aa10.3□□□□□ -0.76
LCP5YER127W RPB10P22139 70 aa10.29□□□□□ -0.76
LCP5YER127W VMA3P25515 160 aa10.29□□□□□ -0.76
LCP5YER127W PPX1P38698 397 aa10.29□□□□□ -0.76
LCP5YER127W YJR098CP47139 656 aa10.29□□□□□ -0.76
LCP5YER127W APC11Q12157 165 aa10.29□□□□□ -0.76
LCP5YER127W IRE1P32361 1115 aa10.28□□□□□ -0.76
LCP5YER127W DAL1P32375 460 aa10.27□□□□□ -0.77
LCP5YER127W SHM1P37292 490 aaPredicted RBP10.27□□□□□ -0.77
LCP5YER127W RGA1P39083 1007 aa10.27□□□□□ -0.77
LCP5YER127W TRS120Q04183 1289 aa10.27□□□□□ -0.77
LCP5YER127W LDH1P38139 375 aa10.26□□□□□ -0.77
LCP5YER127W UTP4Q06679 776 aaKnown RBP10.26□□□□□ -0.77
LCP5YER127W WHI5Q12416 295 aa10.26□□□□□ -0.77
LCP5YER127W RPS31P05759 152 aaKnown RBP10.25□□□□□ -0.77
LCP5YER127W GCR2Q01722 534 aa10.25□□□□□ -0.77
LCP5YER127W TCB1Q12466 1186 aa10.25□□□□□ -0.77
LCP5YER127W QDR2P40474 542 aa10.24□□□□□ -0.77
LCP5YER127W HXT8P40886 569 aa10.24□□□□□ -0.77
LCP5YER127W POL32P47110 350 aa10.24□□□□□ -0.77
LCP5YER127W INO80P53115 1489 aa10.23□□□□□ -0.77
LCP5YER127W ASF1P32447 279 aa10.23□□□□□ -0.77
LCP5YER127W SLA1P32790 1244 aa10.23□□□□□ -0.77
LCP5YER127W UFD2P54860 961 aa10.23□□□□□ -0.77
LCP5YER127W DYS1P38791 387 aa10.22□□□□□ -0.77
LCP5YER127W MTO1P53070 669 aa10.22□□□□□ -0.77
LCP5YER127W SNU71P53207 620 aaKnown RBP10.22□□□□□ -0.77
LCP5YER127W TY1A-DR3Q12441 440 aa10.22□□□□□ -0.77
LCP5YER127W KAP122P32767 1081 aa10.21□□□□□ -0.77
LCP5YER127W BRE2P43132 505 aa10.21□□□□□ -0.77
LCP5YER127W VTC4P47075 721 aa10.21□□□□□ -0.77
LCP5YER127W YLR346CQ06139 101 aa10.21□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms