RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C DAN4P47179 1161 aa2.5□□□□□ -2.01
MSH6YDR097C YDL206WQ12424 762 aa2.5□□□□□ -2.01
MSH6YDR097C TRP5P00931 707 aaKnown RBP2.49□□□□□ -2.01
MSH6YDR097C HTA1P04911 132 aaKnown RBP2.49□□□□□ -2.01
MSH6YDR097C HTA2P04912 132 aa2.49□□□□□ -2.01
MSH6YDR097C FUR4P05316 633 aaKnown RBP2.49□□□□□ -2.01
MSH6YDR097C CST6P40535 587 aa2.49□□□□□ -2.01
MSH6YDR097C RTS3P53289 263 aa2.49□□□□□ -2.01
MSH6YDR097C DOS2P54858 310 aa2.49□□□□□ -2.01
MSH6YDR097C SPR28Q04921 423 aa2.49□□□□□ -2.01
MSH6YDR097C MCM16Q12262 181 aa2.49□□□□□ -2.01
MSH6YDR097C MIP1P15801 1254 aa2.48□□□□□ -2.01
MSH6YDR097C PRI2P20457 528 aa2.48□□□□□ -2.01
MSH6YDR097C CLB5P30283 435 aa2.48□□□□□ -2.01
MSH6YDR097C SIS2P36024 562 aa2.48□□□□□ -2.01
MSH6YDR097C SLI15P38283 698 aa2.48□□□□□ -2.01
MSH6YDR097C TPS3P38426 1054 aaKnown RBP2.48□□□□□ -2.01
MSH6YDR097C MGE1P38523 228 aa2.48□□□□□ -2.01
MSH6YDR097C SPT5P27692 1063 aaKnown RBP2.48□□□□□ -2.01
MSH6YDR097C PNP1Q05788 311 aa2.48□□□□□ -2.01
MSH6YDR097C NCR1Q12200 1170 aa2.48□□□□□ -2.01
MSH6YDR097C GAL2P13181 574 aa2.48□□□□□ -2.01
MSH6YDR097C RDS2P19541 446 aaKnown RBP2.48□□□□□ -2.01
MSH6YDR097C RTF1P53064 558 aa2.48□□□□□ -2.01
MSH6YDR097C NAF1P53919 492 aaKnown RBP2.48□□□□□ -2.01
MSH6YDR097C TRL1P09880 827 aaKnown RBP2.47□□□□□ -2.01
MSH6YDR097C SEC20P28791 383 aa2.47□□□□□ -2.01
MSH6YDR097C TPD3P31383 635 aa2.47□□□□□ -2.01
MSH6YDR097C FKH1P40466 484 aa2.47□□□□□ -2.01
MSH6YDR097C RIM21P48565 533 aa2.47□□□□□ -2.01
MSH6YDR097C CDC53Q12018 815 aaKnown RBP2.47□□□□□ -2.01
MSH6YDR097C YEL023CP39992 682 aa2.47□□□□□ -2.01
MSH6YDR097C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
MSH6YDR097C WRS1Q12109 432 aaKnown RBP2.47□□□□□ -2.01
MSH6YDR097C MSB4Q12317 492 aa2.47□□□□□ -2.01
MSH6YDR097C SUT1P53032 299 aaKnown RBP2.46□□□□□ -2.01
MSH6YDR097C YPR084WQ06821 456 aa2.46□□□□□ -2.01
MSH6YDR097C YTA7P40340 1379 aa2.46□□□□□ -2.02
MSH6YDR097C MAK16P10962 306 aaPredicted RBP2.46□□□□□ -2.02
MSH6YDR097C FYV10P40492 516 aa2.46□□□□□ -2.02
MSH6YDR097C CWC15Q03772 175 aaKnown RBP2.46□□□□□ -2.02
MSH6YDR097C CSC1Q06538 782 aa2.46□□□□□ -2.02
MSH6YDR097C QDR1P40475 563 aa2.46□□□□□ -2.02
MSH6YDR097C PML39Q03760 334 aa2.46□□□□□ -2.02
MSH6YDR097C NUP188P52593 1655 aaKnown RBP2.45□□□□□ -2.02
MSH6YDR097C NUD1P32336 851 aa2.45□□□□□ -2.02
MSH6YDR097C NNF1P47149 201 aa2.45□□□□□ -2.02
MSH6YDR097C TFB4Q12004 338 aa2.45□□□□□ -2.02
MSH6YDR097C WHI5Q12416 295 aa2.45□□□□□ -2.02
MSH6YDR097C VMR1P38735 1592 aa2.45□□□□□ -2.02
MSH6YDR097C PDR1P12383 1068 aa2.45□□□□□ -2.02
MSH6YDR097C RPT1P33299 467 aaKnown RBP2.45□□□□□ -2.02
MSH6YDR097C SPC42P36094 363 aa2.45□□□□□ -2.02
MSH6YDR097C ACS2P52910 683 aaKnown RBP2.45□□□□□ -2.02
MSH6YDR097C UTP13Q05946 817 aaKnown RBP2.45□□□□□ -2.02
MSH6YDR097C LAM6Q08001 693 aa2.45□□□□□ -2.02
MSH6YDR097C TOP2P06786 1428 aaKnown RBP2.45□□□□□ -2.02
MSH6YDR097C BOL3P39724 118 aa2.45□□□□□ -2.02
MSH6YDR097C ALD3P54114 506 aa2.45□□□□□ -2.02
MSH6YDR097C MSC6Q08818 692 aaKnown RBP2.45□□□□□ -2.02
MSH6YDR097C YOR131CQ12486 218 aa2.45□□□□□ -2.02
MSH6YDR097C POL1P13382 1468 aa2.44□□□□□ -2.02
MSH6YDR097C DAT1P13483 248 aaKnown RBP2.44□□□□□ -2.02
MSH6YDR097C VAN1P23642 535 aa2.44□□□□□ -2.02
MSH6YDR097C OCA5P38738 679 aa2.44□□□□□ -2.02
MSH6YDR097C PUS6P53294 404 aa2.44□□□□□ -2.02
MSH6YDR097C YNL115CP53925 644 aa2.44□□□□□ -2.02
MSH6YDR097C AGE1Q04412 482 aa2.44□□□□□ -2.02
MSH6YDR097C RAM1P22007 431 aa2.44□□□□□ -2.02
MSH6YDR097C ASF1P32447 279 aa2.44□□□□□ -2.02
MSH6YDR097C RPS26AP39938 119 aaKnown RBP2.44□□□□□ -2.02
MSH6YDR097C RPS26BP39939 119 aaKnown RBP2.44□□□□□ -2.02
MSH6YDR097C MDJ2P42834 146 aa2.44□□□□□ -2.02
MSH6YDR097C YPP1P46951 817 aa2.44□□□□□ -2.02
MSH6YDR097C TEC1P18412 486 aa2.44□□□□□ -2.02
MSH6YDR097C ELP4Q02884 456 aaKnown RBP2.44□□□□□ -2.02
MSH6YDR097C STE20Q03497 939 aaKnown RBP2.44□□□□□ -2.02
MSH6YDR097C NUT2Q06213 157 aa2.43□□□□□ -2.02
MSH6YDR097C YBT1P32386 1661 aa2.43□□□□□ -2.02
MSH6YDR097C MLP2P40457 1679 aa2.43□□□□□ -2.02
MSH6YDR097C YHL008CP38750 627 aa2.43□□□□□ -2.02
MSH6YDR097C TUB4P53378 473 aa2.43□□□□□ -2.02
MSH6YDR097C APP1P53933 587 aa2.43□□□□□ -2.02
MSH6YDR097C ISR1Q06098 443 aaKnown RBP2.43□□□□□ -2.02
MSH6YDR097C CBC2Q08920 208 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
MSH6YDR097C FRT1Q99332 602 aa2.43□□□□□ -2.02
MSH6YDR097C EAP1P36041 632 aaKnown RBP2.43□□□□□ -2.02
MSH6YDR097C BDS1Q08347 646 aa2.43□□□□□ -2.02
MSH6YDR097C UBP1P25037 809 aa2.42□□□□□ -2.02
MSH6YDR097C PTC4P38089 393 aa2.42□□□□□ -2.02
MSH6YDR097C PPX1P38698 397 aa2.42□□□□□ -2.02
MSH6YDR097C APC11Q12157 165 aa2.42□□□□□ -2.02
MSH6YDR097C NUP159P40477 1460 aa2.42□□□□□ -2.02
MSH6YDR097C RRN7P40992 514 aa2.42□□□□□ -2.02
MSH6YDR097C YOL098CQ12496 1037 aa2.42□□□□□ -2.02
MSH6YDR097C RPB10P22139 70 aa2.42□□□□□ -2.02
MSH6YDR097C GUT2P32191 649 aa2.42□□□□□ -2.02
MSH6YDR097C ISC10P32645 267 aa2.42□□□□□ -2.02
MSH6YDR097C KTR2P33550 425 aa2.42□□□□□ -2.02
MSH6YDR097C RRP14P36080 434 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms