RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeastyeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPO21YDL140C YOL036WQ08206 761 aa4.37□□□□□ -1.71
RPO21YDL140C FUS1P11710 512 aa4.37□□□□□ -1.71
RPO21YDL140C EBP2P36049 427 aaKnown RBP4.37□□□□□ -1.71
RPO21YDL140C FMO1P38866 432 aa4.37□□□□□ -1.71
RPO21YDL140C ACK1Q07622 623 aaPredicted RBP4.37□□□□□ -1.71
RPO21YDL140C BUD3P25558 1636 aa4.37□□□□□ -1.71
RPO21YDL140C PIF1P07271 859 aa4.37□□□□□ -1.71
RPO21YDL140C AFT1P22149 690 aa4.37□□□□□ -1.71
RPO21YDL140C SSK2P53599 1579 aa4.37□□□□□ -1.71
RPO21YDL140C YNL050CP53952 270 aa4.37□□□□□ -1.71
RPO21YDL140C EIS1Q05050 843 aaKnown RBP4.37□□□□□ -1.71
RPO21YDL140C VPS45P38932 577 aa4.36□□□□□ -1.71
RPO21YDL140C OSW2Q12202 724 aa4.36□□□□□ -1.71
RPO21YDL140C NUG1P40010 520 aaKnown RBP4.36□□□□□ -1.71
RPO21YDL140C PSF2P40359 213 aa4.36□□□□□ -1.71
RPO21YDL140C VTC4P47075 721 aa4.36□□□□□ -1.71
RPO21YDL140C MAM3Q12296 706 aa4.36□□□□□ -1.71
RPO21YDL140C YRF1-4O13559 1382 aa4.36□□□□□ -1.71
RPO21YDL140C GEA1P47102 1408 aaPredicted RBP4.36□□□□□ -1.71
RPO21YDL140C CDC48P25694 835 aaKnown RBP4.36□□□□□ -1.71
RPO21YDL140C DLD1P32891 587 aa4.36□□□□□ -1.71
RPO21YDL140C IQG1Q12280 1495 aa4.36□□□□□ -1.71
RPO21YDL140C TY1B-AO13527 1196 aaKnown RBP4.36□□□□□ -1.71
RPO21YDL140C ERG12P07277 443 aa4.36□□□□□ -1.71
RPO21YDL140C RPN3P40016 523 aaKnown RBP4.36□□□□□ -1.71
RPO21YDL140C SPO71Q03868 1245 aa4.36□□□□□ -1.71
RPO21YDL140C BRR1Q99177 341 aaPredicted RBP4.36□□□□□ -1.71
RPO21YDL140C DCD1P06773 312 aa4.35□□□□□ -1.71
RPO21YDL140C RPS24AP0CX31 135 aaKnown RBP4.35□□□□□ -1.71
RPO21YDL140C RPS24BP0CX32 135 aaKnown RBP4.35□□□□□ -1.71
RPO21YDL140C VPS8P39702 1274 aa4.35□□□□□ -1.71
RPO21YDL140C SAP185P40856 1058 aa4.35□□□□□ -1.71
RPO21YDL140C SPO1P53541 631 aa4.35□□□□□ -1.71
RPO21YDL140C CAT8P39113 1433 aa4.35□□□□□ -1.71
RPO21YDL140C PEX5P35056 612 aa4.35□□□□□ -1.71
RPO21YDL140C SHE3P38272 425 aaKnown RBP4.35□□□□□ -1.71
RPO21YDL140C YOR1P53049 1477 aa4.35□□□□□ -1.71
RPO21YDL140C SEC8P32855 1065 aa4.34□□□□□ -1.71
RPO21YDL140C NNF1P47149 201 aa4.34□□□□□ -1.71
RPO21YDL140C SUB2Q07478 446 aaKnown RBP4.34□□□□□ -1.71
RPO21YDL140C CDC19P00549 500 aaKnown RBP4.34□□□□□ -1.71
RPO21YDL140C RAD4P14736 754 aa4.34□□□□□ -1.71
RPO21YDL140C ENT3P47160 408 aa4.34□□□□□ -1.71
RPO21YDL140C COS5P47187 383 aa4.34□□□□□ -1.71
RPO21YDL140C CNM67P53865 581 aaKnown RBP4.34□□□□□ -1.71
RPO21YDL140C RTC4P53850 401 aa4.34□□□□□ -1.71
RPO21YDL140C HAT1Q12341 374 aa4.34□□□□□ -1.71
RPO21YDL140C SIN3P22579 1536 aa4.34□□□□□ -1.72
RPO21YDL140C DOT5P40553 215 aa4.34□□□□□ -1.72
RPO21YDL140C YGL082WP53155 381 aa4.34□□□□□ -1.72
RPO21YDL140C NUP170P38181 1502 aa4.34□□□□□ -1.72
RPO21YDL140C SNA3P14359 133 aa4.33□□□□□ -1.72
RPO21YDL140C RTG2P32608 588 aaKnown RBP4.33□□□□□ -1.72
RPO21YDL140C OCT1P35999 772 aa4.33□□□□□ -1.72
RPO21YDL140C MAK5P38112 773 aaPredicted RBP4.33□□□□□ -1.72
RPO21YDL140C HXT5P38695 592 aa4.33□□□□□ -1.72
RPO21YDL140C NYV1Q12255 253 aa4.33□□□□□ -1.72
RPO21YDL140C MYO4P32492 1471 aa4.33□□□□□ -1.72
RPO21YDL140C SPT21P35209 758 aa4.33□□□□□ -1.72
RPO21YDL140C YOR131CQ12486 218 aa4.33□□□□□ -1.72
RPO21YDL140C SDH2P21801 266 aa4.33□□□□□ -1.72
RPO21YDL140C YBR238CP38330 731 aaKnown RBP4.33□□□□□ -1.72
RPO21YDL140C FYV10P40492 516 aa4.33□□□□□ -1.72
RPO21YDL140C EPS1P40557 701 aa4.33□□□□□ -1.72
RPO21YDL140C HEH2Q03281 663 aa4.33□□□□□ -1.72
RPO21YDL140C ARP7Q12406 477 aa4.33□□□□□ -1.72
RPO21YDL140C DPH6Q12429 685 aa4.33□□□□□ -1.72
RPO21YDL140C TSC11P40061 1430 aa4.33□□□□□ -1.72
RPO21YDL140C FRD1P32614 470 aaKnown RBP4.33□□□□□ -1.72
RPO21YDL140C SAK1P38990 1142 aa4.33□□□□□ -1.72
RPO21YDL140C CBF2P32504 956 aa4.32□□□□□ -1.72
RPO21YDL140C WHI3P34761 661 aaKnown RBP4.32□□□□□ -1.72
RPO21YDL140C NUP133P36161 1157 aa4.32□□□□□ -1.72
RPO21YDL140C RTP1Q12751 981 aa4.32□□□□□ -1.72
RPO21YDL140C IDI1P15496 288 aa4.32□□□□□ -1.72
RPO21YDL140C YBL028CP38202 106 aa4.32□□□□□ -1.72
RPO21YDL140C DNM1P54861 757 aa4.32□□□□□ -1.72
RPO21YDL140C TAF13P11747 167 aa4.32□□□□□ -1.72
RPO21YDL140C ACE2P21192 770 aa4.32□□□□□ -1.72
RPO21YDL140C BUD14P27637 709 aa4.32□□□□□ -1.72
RPO21YDL140C PFF1P38244 976 aa4.32□□□□□ -1.72
RPO21YDL140C GYP7P48365 746 aa4.32□□□□□ -1.72
RPO21YDL140C FMP30Q02883 468 aa4.32□□□□□ -1.72
RPO21YDL140C SRP40P32583 406 aaPredicted RBP4.32□□□□□ -1.72
RPO21YDL140C XRS2P33301 854 aa4.32□□□□□ -1.72
RPO21YDL140C GSM1P42950 618 aa4.32□□□□□ -1.72
RPO21YDL140C SKY1Q03656 742 aa4.32□□□□□ -1.72
RPO21YDL140C COBP00163 385 aa4.31□□□□□ -1.72
RPO21YDL140C CLN2P20438 545 aa4.31□□□□□ -1.72
RPO21YDL140C VMA4P22203 233 aaKnown RBP4.31□□□□□ -1.72
RPO21YDL140C VPS3P23643 1011 aa4.31□□□□□ -1.72
RPO21YDL140C COQ8P27697 501 aa4.31□□□□□ -1.72
RPO21YDL140C SKG6P32900 734 aaPredicted RBP4.31□□□□□ -1.72
RPO21YDL140C RIM101P33400 625 aa4.31□□□□□ -1.72
RPO21YDL140C NPA3P47122 385 aa4.31□□□□□ -1.72
RPO21YDL140C RSM26P47141 266 aa4.31□□□□□ -1.72
RPO21YDL140C PSP2P50109 593 aaKnown RBP4.31□□□□□ -1.72
RPO21YDL140C MDR1P53258 950 aa4.31□□□□□ -1.72
RPO21YDL140C VID27P40157 782 aa4.31□□□□□ -1.72
RPO21YDL140C SCD6P45978 349 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
Retrieved 100 of 5,963 RNA–protein pairs in 119.5 ms