RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C COQ4O13525 335 aa8.82□□□□□ -1
LDB7YBL006C MRPL32P25348 183 aa8.82□□□□□ -1
LDB7YBL006C ZDS2P54786 942 aa8.82□□□□□ -1
LDB7YBL006C RTG2P32608 588 aaKnown RBP8.81□□□□□ -1
LDB7YBL006C ZDS1P50111 915 aaKnown RBP8.81□□□□□ -1
LDB7YBL006C HAT1Q12341 374 aa8.81□□□□□ -1
LDB7YBL006C RPN1P38764 993 aaKnown RBP8.8□□□□□ -1
LDB7YBL006C MAM1P40065 302 aa8.8□□□□□ -1
LDB7YBL006C VPS64Q03944 604 aa8.8□□□□□ -1
LDB7YBL006C SYF1Q04048 859 aaPredicted RBP8.8□□□□□ -1
LDB7YBL006C THI22Q06490 572 aa8.8□□□□□ -1
LDB7YBL006C BMS1Q08965 1183 aaKnown RBP8.8□□□□□ -1
LDB7YBL006C FRD1P32614 470 aaKnown RBP8.79□□□□□ -1
LDB7YBL006C SAS4Q04003 481 aa8.79□□□□□ -1
LDB7YBL006C YLR271WQ06152 274 aa8.78□□□□□ -1
LDB7YBL006C RTT109Q07794 436 aa8.78□□□□□ -1
LDB7YBL006C YBR287WP38355 427 aa8.76□□□□□ -1.01
LDB7YBL006C YOL057WQ08225 711 aa8.76□□□□□ -1.01
LDB7YBL006C SWI1P09547 1314 aa8.76□□□□□ -1.01
LDB7YBL006C GAP1P19145 602 aaPredicted RBP8.75□□□□□ -1.01
LDB7YBL006C ETP1P38748 585 aaKnown RBP8.75□□□□□ -1.01
LDB7YBL006C MPP10P47083 593 aaKnown RBP8.75□□□□□ -1.01
LDB7YBL006C GYP7P48365 746 aa8.75□□□□□ -1.01
LDB7YBL006C DPL1Q05567 589 aa8.75□□□□□ -1.01
LDB7YBL006C VHR2P40041 505 aa8.74□□□□□ -1.01
LDB7YBL006C FET4P40988 552 aa8.74□□□□□ -1.01
LDB7YBL006C SET4P42948 560 aa8.74□□□□□ -1.01
LDB7YBL006C HEF3P53978 1044 aaKnown RBP8.74□□□□□ -1.01
LDB7YBL006C FCP1Q03254 732 aa8.74□□□□□ -1.01
LDB7YBL006C MSM1P22438 575 aa8.73□□□□□ -1.01
LDB7YBL006C DNM1P54861 757 aa8.73□□□□□ -1.01
LDB7YBL006C TIM50Q02776 476 aa8.73□□□□□ -1.01
LDB7YBL006C PKH1Q03407 766 aa8.73□□□□□ -1.01
LDB7YBL006C YDR306CQ06640 478 aa8.72□□□□□ -1.01
LDB7YBL006C GLC3P32775 704 aa8.71□□□□□ -1.02
LDB7YBL006C YJR008WP47085 338 aa8.71□□□□□ -1.02
LDB7YBL006C POM152P39685 1337 aa8.71□□□□□ -1.02
LDB7YBL006C CST6P40535 587 aa8.7□□□□□ -1.02
LDB7YBL006C DUS1P53759 423 aaKnown RBP8.7□□□□□ -1.02
LDB7YBL006C SRT1Q03175 343 aa8.7□□□□□ -1.02
LDB7YBL006C YDL144CQ07589 356 aa8.7□□□□□ -1.02
LDB7YBL006C NSR1P27476 414 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02 RIP-Chip
LDB7YBL006C YIL089WP40500 205 aa8.69□□□□□ -1.02
LDB7YBL006C TRM44Q02648 567 aaKnown RBP8.69□□□□□ -1.02
LDB7YBL006C GAS5Q08193 484 aa8.69□□□□□ -1.02
LDB7YBL006C DPH6Q12429 685 aa8.69□□□□□ -1.02
LDB7YBL006C SAC3P46674 1301 aa8.69□□□□□ -1.02
LDB7YBL006C DUR1,2P32528 1835 aaKnown RBP8.68□□□□□ -1.02
LDB7YBL006C TRP5P00931 707 aaKnown RBP8.68□□□□□ -1.02
LDB7YBL006C KRE2P27809 442 aa8.68□□□□□ -1.02
LDB7YBL006C TPD3P31383 635 aa8.68□□□□□ -1.02
LDB7YBL006C NUP133P36161 1157 aa8.68□□□□□ -1.02
LDB7YBL006C STV1P37296 890 aa8.68□□□□□ -1.02
LDB7YBL006C EMP47P43555 445 aa8.68□□□□□ -1.02
LDB7YBL006C VPS4P52917 437 aa8.68□□□□□ -1.02
LDB7YBL006C FLO11P08640 1367 aa8.67□□□□□ -1.02
LDB7YBL006C MRP7P12687 371 aa8.67□□□□□ -1.02
LDB7YBL006C SET1P38827 1080 aaKnown RBP8.67□□□□□ -1.02
LDB7YBL006C ICP55P40051 511 aa8.67□□□□□ -1.02
LDB7YBL006C PEA2P40091 420 aa8.67□□□□□ -1.02
LDB7YBL006C YGR117CP53270 476 aa8.67□□□□□ -1.02
LDB7YBL006C AIM7Q12156 149 aa8.67□□□□□ -1.02
LDB7YBL006C SPL2P38839 148 aa8.66□□□□□ -1.02
LDB7YBL006C TIF4632P39936 914 aaKnown RBP8.66□□□□□ -1.02
LDB7YBL006C UBX2Q04228 584 aa8.66□□□□□ -1.02
LDB7YBL006C AFG2P32794 780 aa8.65□□□□□ -1.02
LDB7YBL006C ITC1P53125 1264 aa8.65□□□□□ -1.02
LDB7YBL006C RPT4P53549 437 aaKnown RBP8.65□□□□□ -1.02
LDB7YBL006C RRG1Q12167 365 aaPredicted RBP8.65□□□□□ -1.02
LDB7YBL006C HPR1P17629 752 aaKnown RBP8.64□□□□□ -1.03
LDB7YBL006C TYW1Q08960 810 aaKnown RBP8.64□□□□□ -1.03
LDB7YBL006C MGM1P32266 881 aa8.63□□□□□ -1.03
LDB7YBL006C YGR122WP53272 402 aa8.63□□□□□ -1.03
LDB7YBL006C CRF1Q04930 467 aa8.63□□□□□ -1.03
LDB7YBL006C THI3Q07471 609 aa8.63□□□□□ -1.03
LDB7YBL006C NGR1P32831 672 aaKnown RBP8.62□□□□□ -1.03
LDB7YBL006C CWC15Q03772 175 aaKnown RBP8.62□□□□□ -1.03
LDB7YBL006C PSH1Q12161 406 aa8.62□□□□□ -1.03
LDB7YBL006C GSC2P40989 1895 aa8.61□□□□□ -1.03
LDB7YBL006C GSM1P42950 618 aa8.6□□□□□ -1.03
LDB7YBL006C MTC5Q03897 1148 aa8.6□□□□□ -1.03
LDB7YBL006C SUI2P20459 304 aaKnown RBP8.59□□□□□ -1.03
LDB7YBL006C SWC3P31376 625 aa8.59□□□□□ -1.03
LDB7YBL006C RAD24P32641 659 aa8.59□□□□□ -1.03
LDB7YBL006C TOS4Q06266 489 aa8.59□□□□□ -1.03
LDB7YBL006C YGL015CP33199 130 aa8.58□□□□□ -1.04
LDB7YBL006C UTP7P40055 554 aaKnown RBP8.58□□□□□ -1.04
LDB7YBL006C HXT10P43581 546 aa8.58□□□□□ -1.04
LDB7YBL006C IRC4Q03036 179 aa8.58□□□□□ -1.04
LDB7YBL006C PRP42Q03776 544 aaKnown RBP8.58□□□□□ -1.04
LDB7YBL006C LCB1P25045 558 aaKnown RBP8.57□□□□□ -1.04
LDB7YBL006C UBP12P39538 1254 aa8.57□□□□□ -1.04
LDB7YBL006C SEN54Q02825 467 aaPredicted RBP8.57□□□□□ -1.04
LDB7YBL006C TIF6Q12522 245 aaKnown RBP8.57□□□□□ -1.04
LDB7YBL006C ARG82P07250 355 aa8.56□□□□□ -1.04
LDB7YBL006C CBP1P07252 654 aa8.56□□□□□ -1.04
LDB7YBL006C HVG1P0CE11 249 aa8.56□□□□□ -1.04
LDB7YBL006C RPS7AP26786 190 aaKnown RBP8.56□□□□□ -1.04
LDB7YBL006C SRF1Q12516 437 aa8.56□□□□□ -1.04
LDB7YBL006C RPP0P05317 312 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms