RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C UBP13P38187 747 aa8.29□□□□□ -1.08
CCR4YAL021C TCD1P38756 429 aa8.29□□□□□ -1.08
CCR4YAL021C SGT2Q12118 346 aaKnown RBP8.29□□□□□ -1.08
CCR4YAL021C RTC1Q08281 1341 aa8.28□□□□□ -1.08
CCR4YAL021C SPT6P23615 1451 aaKnown RBP8.28□□□□□ -1.08
CCR4YAL021C THR4P16120 514 aaKnown RBP8.28□□□□□ -1.08
CCR4YAL021C STE5P32917 917 aa8.28□□□□□ -1.08
CCR4YAL021C ILV3P39522 585 aaKnown RBP8.28□□□□□ -1.08
CCR4YAL021C SPO19Q03029 223 aa8.28□□□□□ -1.08
CCR4YAL021C BRR1Q99177 341 aaPredicted RBP8.28□□□□□ -1.08
CCR4YAL021C FAR1P21268 830 aa8.28□□□□□ -1.08
CCR4YAL021C EXO84P38261 753 aa8.28□□□□□ -1.08
CCR4YAL021C ERC1P38767 581 aa8.28□□□□□ -1.08
CCR4YAL021C FAF1P40546 346 aaPredicted RBP8.28□□□□□ -1.08
CCR4YAL021C SUM1P46676 1062 aa8.28□□□□□ -1.08
CCR4YAL021C RIA1P53893 1110 aa8.28□□□□□ -1.08
CCR4YAL021C CEX1Q12453 761 aa8.28□□□□□ -1.08
CCR4YAL021C MAM1P40065 302 aa8.27□□□□□ -1.09
CCR4YAL021C YRB1P41920 201 aaKnown RBP8.27□□□□□ -1.09
CCR4YAL021C PSD2P53037 1138 aaKnown RBP8.27□□□□□ -1.09
CCR4YAL021C CTF4Q01454 927 aa8.27□□□□□ -1.09
CCR4YAL021C SML1Q04964 104 aa8.27□□□□□ -1.09
CCR4YAL021C RAD50P12753 1312 aa8.27□□□□□ -1.09
CCR4YAL021C NUP145P49687 1317 aa8.27□□□□□ -1.09
CCR4YAL021C MSM1P22438 575 aa8.27□□□□□ -1.09
CCR4YAL021C TIF3P34167 436 aaKnown RBP8.27□□□□□ -1.09
CCR4YAL021C BTN2P53286 410 aa8.27□□□□□ -1.09
CCR4YAL021C VPS20Q04272 221 aa8.27□□□□□ -1.09
CCR4YAL021C THO2P53552 1597 aaKnown RBP8.27□□□□□ -1.09
CCR4YAL021C YEL1P34225 687 aa8.26□□□□□ -1.09
CCR4YAL021C YIR042CP40586 236 aa8.26□□□□□ -1.09
CCR4YAL021C HOS3Q02959 697 aaKnown RBP8.26□□□□□ -1.09
CCR4YAL021C SLX4Q12098 748 aa8.26□□□□□ -1.09
CCR4YAL021C SPR3P41901 512 aa8.26□□□□□ -1.09
CCR4YAL021C BFA1P47113 574 aa8.26□□□□□ -1.09
CCR4YAL021C OCA1P50946 238 aaPredicted RBP8.26□□□□□ -1.09
CCR4YAL021C SHE4P51534 789 aa8.26□□□□□ -1.09
CCR4YAL021C ADE12P80210 433 aaKnown RBP8.26□□□□□ -1.09
CCR4YAL021C SMD2Q06217 110 aaKnown RBP8.26□□□□□ -1.09
CCR4YAL021C AI2P03876 854 aa8.25□□□□□ -1.09
CCR4YAL021C UBX2Q04228 584 aa8.25□□□□□ -1.09
CCR4YAL021C VMS1Q04311 632 aaKnown RBP8.25□□□□□ -1.09
CCR4YAL021C BUD14P27637 709 aa8.25□□□□□ -1.09
CCR4YAL021C ARC19P33204 171 aaKnown RBP8.25□□□□□ -1.09
CCR4YAL021C VPS24P36095 224 aaKnown RBP8.25□□□□□ -1.09
CCR4YAL021C ELA1P53861 379 aaPredicted RBP8.25□□□□□ -1.09
CCR4YAL021C MRS2Q01926 470 aa8.25□□□□□ -1.09
CCR4YAL021C APC5Q08683 685 aa8.25□□□□□ -1.09
CCR4YAL021C PCL8Q08966 492 aa8.25□□□□□ -1.09
CCR4YAL021C TRS33Q99394 268 aa8.25□□□□□ -1.09
CCR4YAL021C PEX5P35056 612 aa8.24□□□□□ -1.09
CCR4YAL021C RKM4Q12504 494 aa8.24□□□□□ -1.09
CCR4YAL021C TRM3Q07527 1436 aa8.24□□□□□ -1.09
CCR4YAL021C IST1P53843 298 aaPredicted RBP8.24□□□□□ -1.09
CCR4YAL021C ARR2Q06597 130 aa8.24□□□□□ -1.09
CCR4YAL021C IKI3Q06706 1349 aaKnown RBP8.23□□□□□ -1.09
CCR4YAL021C GDT1P38301 280 aaPredicted RBP8.23□□□□□ -1.09
CCR4YAL021C RAD9P14737 1309 aa8.23□□□□□ -1.09
CCR4YAL021C SAC3P46674 1301 aa8.23□□□□□ -1.09
CCR4YAL021C ACP1P32463 125 aa8.23□□□□□ -1.09
CCR4YAL021C EFB1P32471 206 aaKnown RBP8.23□□□□□ -1.09
CCR4YAL021C CIC1P38779 376 aaKnown RBP8.23□□□□□ -1.09
CCR4YAL021C RTT107P38850 1070 aa8.23□□□□□ -1.09
CCR4YAL021C SEC14P24280 304 aaKnown RBP8.22□□□□□ -1.09
CCR4YAL021C RAD17P48581 401 aa8.22□□□□□ -1.09
CCR4YAL021C ARP5P53946 755 aa8.22□□□□□ -1.09
CCR4YAL021C HOT1Q03213 719 aa8.22□□□□□ -1.09
CCR4YAL021C OPI1P21957 404 aa8.22□□□□□ -1.09
CCR4YAL021C ESL2P36168 1195 aa8.22□□□□□ -1.09
CCR4YAL021C SHC1P39000 512 aa8.22□□□□□ -1.09
CCR4YAL021C YLR271WQ06152 274 aa8.22□□□□□ -1.09
CCR4YAL021C MPH3P0CE00 602 aa8.21□□□□□ -1.1
CCR4YAL021C BDF1P35817 686 aa8.21□□□□□ -1.1
CCR4YAL021C CLP1Q08685 445 aaPredicted RBP8.21□□□□□ -1.1
CCR4YAL021C HMG1P12683 1054 aa8.21□□□□□ -1.1
CCR4YAL021C CDC3P32457 520 aaKnown RBP8.21□□□□□ -1.1
CCR4YAL021C NFU1P32860 256 aa8.21□□□□□ -1.1
CCR4YAL021C UBP12P39538 1254 aa8.21□□□□□ -1.1
CCR4YAL021C RSM28Q03430 361 aa8.21□□□□□ -1.1
CCR4YAL021C YPR097WQ06839 1073 aa8.21□□□□□ -1.1
CCR4YAL021C SAP1P39955 897 aaKnown RBP8.2□□□□□ -1.1
CCR4YAL021C RTT106P40161 455 aa8.2□□□□□ -1.1
CCR4YAL021C MEP1P40260 492 aa8.2□□□□□ -1.1
CCR4YAL021C SDS3P40505 327 aa8.2□□□□□ -1.1
CCR4YAL021C DSL1P53847 754 aa8.2□□□□□ -1.1
CCR4YAL021C YDL073WQ07454 984 aa8.2□□□□□ -1.1
CCR4YAL021C ATG14P38270 344 aa8.19□□□□□ -1.1
CCR4YAL021C PMC1P38929 1173 aaPredicted RBP8.19□□□□□ -1.1
CCR4YAL021C TEA1P47988 759 aa8.19□□□□□ -1.1
CCR4YAL021C KEL2P50090 882 aa8.19□□□□□ -1.1
CCR4YAL021C ESC2Q06340 456 aa8.19□□□□□ -1.1
CCR4YAL021C PMT7Q06644 662 aa8.19□□□□□ -1.1
CCR4YAL021C YDL144CQ07589 356 aa8.19□□□□□ -1.1
CCR4YAL021C SIN3P22579 1536 aa8.19□□□□□ -1.1
CCR4YAL021C MCM2P29469 868 aa8.19□□□□□ -1.1
CCR4YAL021C COY1P34237 679 aa8.19□□□□□ -1.1
CCR4YAL021C AOS1Q06624 347 aa8.19□□□□□ -1.1
CCR4YAL021C SNU66Q12420 587 aaPredicted RBP8.19□□□□□ -1.1
CCR4YAL021C PPH3P32345 308 aa8.18□□□□□ -1.1
CCR4YAL021C MUM2P38236 366 aa8.18□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms