RNA–Protein interactions for RNA: YPL246C

RBD2, Transcript of Possible rhomboid protease, yeast

Gene RBD2, Length 789 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RBD2	YPL246C	RFA3	P26755	122 aa	Known RBP	4.9	□□□□□ -1.63
RBD2	YPL246C	ERG2	P32352	222 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	REC114	P32841	428 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	MNS1	P32906	549 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	SWD2	P36104	329 aa	Predicted RBP	4.9	□□□□□ -1.63
RBD2	YPL246C	ATG8	P38182	117 aa	RIP-Chip data	4.9	□□□□□ -1.63	not detected
RBD2	YPL246C	POG1	P40473	351 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	IKS1	P47042	667 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	YJR011C	P47086	261 aa	Predicted RBP	4.9	□□□□□ -1.63
RBD2	YPL246C	YJR056C	P47115	236 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	UFD1	P53044	361 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	YGR151C	P53287	111 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	GPI15	P53961	229 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	YCL001W-A	P87012	153 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	YMR279C	Q03263	540 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	YML053C	Q04978	212 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	NIP7	Q08962	181 aa	Known RBP	4.9	□□□□□ -1.63
RBD2	YPL246C	FCF2	Q12035	217 aa	Predicted RBP	4.9	□□□□□ -1.63
RBD2	YPL246C	REX3	Q12090	404 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	GAL1	P04385	528 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	CDC36	P06100	191 aa	Predicted RBP	4.89	□□□□□ -1.63
RBD2	YPL246C	YFR010W-A	P0C5N0	62 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	MDH2	P22133	377 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	PEX4	P29340	183 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	OCH1	P31755	480 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	GLC7	P32598	312 aa	Known RBP	4.89	□□□□□ -1.63
RBD2	YPL246C	CLB6	P32943	380 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	SHO1	P40073	367 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	PGD1	P40356	397 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	MOB2	P43563	287 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	AVT4	P50944	713 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	PCP1	P53259	346 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	HHT1	P61830	136 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	MEH1	Q02205	184 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	ADD37	Q03233	198 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	STP4	Q07351	490 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	YOR376W	Q08900	122 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	GRE1	Q08969	168 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	MED4	Q12343	284 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	COA2	Q3E823	68 aa		4.89	□□□□□ -1.63
RBD2	YPL246C	RPB3	P16370	318 aa	Known RBP	4.88	□□□□□ -1.63
RBD2	YPL246C	OLE1	P21147	510 aa	Known RBP	4.88	□□□□□ -1.63
RBD2	YPL246C	SIP1	P32578	815 aa		4.88	□□□□□ -1.63
RBD2	YPL246C	GTT1	P40582	234 aa		4.88	□□□□□ -1.63
RBD2	YPL246C	REE1	P40893	198 aa		4.88	□□□□□ -1.63
RBD2	YPL246C	VMA21	P41806	77 aa		4.88	□□□□□ -1.63
RBD2	YPL246C	CUP9	P41817	306 aa		4.88	□□□□□ -1.63
RBD2	YPL246C	TAX4	P47030	604 aa		4.88	□□□□□ -1.63
RBD2	YPL246C	SSN8	P47821	323 aa		4.88	□□□□□ -1.63
RBD2	YPL246C	HOL1	P53389	586 aa		4.88	□□□□□ -1.63
RBD2	YPL246C	NRM1	P53718	249 aa		4.88	□□□□□ -1.63
RBD2	YPL246C	YPL039W	Q03080	316 aa		4.88	□□□□□ -1.63
RBD2	YPL246C	YMR082C	Q04276	118 aa		4.88	□□□□□ -1.63
RBD2	YPL246C	YOR015W	Q12169	119 aa		4.88	□□□□□ -1.63
RBD2	YPL246C	NCE102	Q12207	173 aa	RIP-Chip data	4.88	□□□□□ -1.63	not detected
RBD2	YPL246C	CDC28	P00546	298 aa	Known RBP	4.87	□□□□□ -1.63
RBD2	YPL246C	YHR214C-D	P0CX93	97 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	SPO7	P18410	259 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	NTF2	P33331	125 aa	Known RBP	4.87	□□□□□ -1.63
RBD2	YPL246C	SOF1	P33750	489 aa	Known RBP	4.87	□□□□□ -1.63
RBD2	YPL246C	SDH4	P37298	181 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	FLO5	P38894	1075 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	YEA4	P40004	342 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	SPC25	P40014	221 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	XBP1	P40489	647 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	YJL016W	P47072	561 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	MOG1	P47123	218 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	DAN1	P47178	298 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	YIF1	P53845	314 aa	Known RBP	4.87	□□□□□ -1.63
RBD2	YPL246C	MRP51	Q02950	344 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	MRPS17	Q03246	237 aa	Predicted RBP	4.87	□□□□□ -1.63
RBD2	YPL246C	CGI121	Q03705	181 aa	Known RBP	4.87	□□□□□ -1.63
RBD2	YPL246C	TSA2	Q04120	196 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	GMC1	Q04399	608 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	FIT1	Q04433	528 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	MRX9	Q07349	420 aa	Known RBP	4.87	□□□□□ -1.63
RBD2	YPL246C	YOL118C	Q08259	102 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	HNT3	Q08702	217 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	RAD28	Q12021	506 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	TGS1	Q12052	315 aa		4.87	□□□□□ -1.63
RBD2	YPL246C	RPL30	P14120	105 aa	Known RBP	4.86	□□□□□ -1.63
RBD2	YPL246C	YCR025C	P25352	136 aa		4.86	□□□□□ -1.63
RBD2	YPL246C	RPB7	P34087	171 aa		4.86	□□□□□ -1.63
RBD2	YPL246C	YBR013C	P38215	129 aa		4.86	□□□□□ -1.63
RBD2	YPL246C	POP2	P39008	433 aa		4.86	□□□□□ -1.63
RBD2	YPL246C	GNA1	P43577	159 aa	Predicted RBP	4.86	□□□□□ -1.63
RBD2	YPL246C	DUG1	P43616	481 aa	Known RBP	4.86	□□□□□ -1.63
RBD2	YPL246C	YJR012C	P47087	207 aa		4.86	□□□□□ -1.63
RBD2	YPL246C	TAF4	P50105	388 aa		4.86	□□□□□ -1.63
RBD2	YPL246C	MSO1	P53604	210 aa	Known RBP	4.86	□□□□□ -1.63
RBD2	YPL246C	RSM23	Q01163	450 aa		4.86	□□□□□ -1.63
RBD2	YPL246C	SDC1	Q03323	175 aa		4.86	□□□□□ -1.63
RBD2	YPL246C	TMA23	Q03525	211 aa		4.86	□□□□□ -1.63
RBD2	YPL246C	TRS23	Q03784	219 aa		4.86	□□□□□ -1.63
RBD2	YPL246C	MIX14	Q04341	121 aa		4.86	□□□□□ -1.63
RBD2	YPL246C	HRI1	Q05905	244 aa	Known RBP	4.86	□□□□□ -1.63
RBD2	YPL246C	YPD1	Q07688	167 aa		4.86	□□□□□ -1.63
RBD2	YPL246C	YLR365W	Q7LIF2	110 aa		4.86	□□□□□ -1.63
RBD2	YPL246C	GDH1	P07262	454 aa	Known RBP	4.85	□□□□□ -1.63
RBD2	YPL246C	CDC26	P14724	124 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms