RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C YBR063CP38083 404 aa2.56□□□□□ -2
ATG27YJL178C YBR242WP38331 238 aa2.56□□□□□ -2
ATG27YJL178C ICE2P40499 491 aa2.56□□□□□ -2
ATG27YJL178C SEH1P53011 349 aaKnown RBP2.56□□□□□ -2
ATG27YJL178C YPS5P53057 165 aa2.56□□□□□ -2
ATG27YJL178C BRR6P53062 197 aa2.56□□□□□ -2
ATG27YJL178C YGR018CP53211 109 aa2.56□□□□□ -2
ATG27YJL178C YGR266WP53326 701 aa2.56□□□□□ -2
ATG27YJL178C RPL6AQ02326 176 aaKnown RBP2.56□□□□□ -2
ATG27YJL178C COX20Q04935 205 aa2.56□□□□□ -2
ATG27YJL178C YPR127WQ06494 345 aa2.56□□□□□ -2
ATG27YJL178C GPN3Q06543 272 aa2.56□□□□□ -2
ATG27YJL178C YPR172WQ06608 200 aa2.56□□□□□ -2
ATG27YJL178C HEM25Q07534 307 aa2.56□□□□□ -2
ATG27YJL178C YFH1Q07540 174 aa2.56□□□□□ -2
ATG27YJL178C BBP1Q12365 385 aa2.56□□□□□ -2
ATG27YJL178C PRP46Q12417 451 aaPredicted RBP2.56□□□□□ -2
ATG27YJL178C FRE6Q12473 712 aa2.56□□□□□ -2
ATG27YJL178C YGL194C-AQ2V2P6 80 aa2.56□□□□□ -2
ATG27YJL178C HFA1P32874 2273 aa2.56□□□□□ -2
ATG27YJL178C ADH1P00330 348 aaKnown RBP2.55□□□□□ -2
ATG27YJL178C SPS2P08459 502 aa2.55□□□□□ -2
ATG27YJL178C YSF3P0C074 85 aaPredicted RBP2.55□□□□□ -2
ATG27YJL178C MRP1P10662 321 aaKnown RBP2.55□□□□□ -2
ATG27YJL178C STE18P18852 110 aa2.55□□□□□ -2
ATG27YJL178C DOA4P32571 926 aa2.55□□□□□ -2
ATG27YJL178C AGA2P32781 87 aa2.55□□□□□ -2
ATG27YJL178C SHE2P36068 246 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
ATG27YJL178C NSG1P38837 291 aa2.55□□□□□ -2
ATG27YJL178C YER184CP39961 794 aa2.55□□□□□ -2
ATG27YJL178C YER137CP40083 148 aaKnown RBP2.55□□□□□ -2
ATG27YJL178C MNN5P46982 586 aa2.55□□□□□ -2
ATG27YJL178C APS3P47064 194 aa2.55□□□□□ -2
ATG27YJL178C YJR141WP47172 347 aaPredicted RBP2.55□□□□□ -2
ATG27YJL178C YGR042WP53227 271 aa2.55□□□□□ -2
ATG27YJL178C MPP6P53725 186 aaPredicted RBP2.55□□□□□ -2
ATG27YJL178C TIM11P81449 96 aaPredicted RBP2.55□□□□□ -2
ATG27YJL178C KEI1Q06346 221 aa2.55□□□□□ -2
ATG27YJL178C YLR030WQ07967 263 aa2.55□□□□□ -2
ATG27YJL178C YDL109CQ12103 647 aa2.55□□□□□ -2
ATG27YJL178C YRA1Q12159 226 aaKnown RBP2.55□□□□□ -2
ATG27YJL178C YOR214CQ12282 236 aa2.55□□□□□ -2
ATG27YJL178C APC2Q12440 853 aa2.55□□□□□ -2
ATG27YJL178C YOR343CQ12484 108 aa2.55□□□□□ -2
ATG27YJL178C FMP16Q12497 93 aa2.55□□□□□ -2
ATG27YJL178C FMP27Q06179 2628 aa2.54□□□□□ -2
ATG27YJL178C COX9P07255 59 aa2.54□□□□□ -2
ATG27YJL178C CKS1P20486 150 aaKnown RBP2.54□□□□□ -2
ATG27YJL178C SFK1P35735 353 aa2.54□□□□□ -2
ATG27YJL178C SRY1P36007 326 aa2.54□□□□□ -2
ATG27YJL178C YKL071WP36086 256 aa2.54□□□□□ -2
ATG27YJL178C ADH5P38113 351 aaKnown RBP2.54□□□□□ -2
ATG27YJL178C YHR180WP38868 163 aa2.54□□□□□ -2
ATG27YJL178C OTU1P43558 301 aa2.54□□□□□ -2
ATG27YJL178C RPE1P46969 238 aa2.54□□□□□ -2
ATG27YJL178C YGL262WP53054 175 aa2.54□□□□□ -2
ATG27YJL178C VHT1P53241 593 aa2.54□□□□□ -2
ATG27YJL178C NRM1P53718 249 aa2.54□□□□□ -2
ATG27YJL178C PDR16P53860 351 aaKnown RBP2.54□□□□□ -2
ATG27YJL178C APJ1P53940 528 aa2.54□□□□□ -2
ATG27YJL178C PET191Q02772 108 aa2.54□□□□□ -2
ATG27YJL178C SNX41Q04053 625 aa2.54□□□□□ -2
ATG27YJL178C VBA1Q04301 562 aa2.54□□□□□ -2
ATG27YJL178C MSC3Q05812 728 aa2.54□□□□□ -2
ATG27YJL178C MCP1Q12106 302 aa2.54□□□□□ -2
ATG27YJL178C HMS1Q12398 434 aa2.54□□□□□ -2
ATG27YJL178C SFG1Q12507 346 aa2.54□□□□□ -2
ATG27YJL178C FOL3Q12676 427 aaPredicted RBP2.54□□□□□ -2
ATG27YJL178C YOS9Q99220 542 aa2.54□□□□□ -2
ATG27YJL178C ACC1Q00955 2233 aaKnown RBP2.53□□□□□ -2
ATG27YJL178C SEC16P48415 2195 aaKnown RBP2.53□□□□□ -2
ATG27YJL178C RPL6BP05739 176 aaKnown RBP2.53□□□□□ -2
ATG27YJL178C YGL041W-AP0C5N3 154 aa2.53□□□□□ -2
ATG27YJL178C NHP6BP11633 99 aaKnown RBP2.53□□□□□ -2
ATG27YJL178C SCO1P23833 295 aa2.53□□□□□ -2
ATG27YJL178C MSN4P33749 630 aa2.53□□□□□ -2
ATG27YJL178C COS9P36034 407 aa2.53□□□□□ -2
ATG27YJL178C MRPL27P36526 146 aaPredicted RBP2.53□□□□□ -2
ATG27YJL178C LSM12P38828 187 aaKnown RBP2.53□□□□□ -2
ATG27YJL178C VMA7P39111 118 aa2.53□□□□□ -2
ATG27YJL178C RTT105P40063 208 aa2.53□□□□□ -2
ATG27YJL178C TIR3P40552 269 aa2.53□□□□□ -2
ATG27YJL178C AIM25P47140 327 aa2.53□□□□□ -2
ATG27YJL178C YGL204CP53089 101 aa2.53□□□□□ -2
ATG27YJL178C OKP1P53298 406 aa2.53□□□□□ -2
ATG27YJL178C MRPL50P53724 139 aa2.53□□□□□ -2
ATG27YJL178C YLR460CP54007 376 aa2.53□□□□□ -2
ATG27YJL178C YDR102CQ03864 110 aa2.53□□□□□ -2
ATG27YJL178C COQ10Q08058 207 aa2.53□□□□□ -2
ATG27YJL178C YNG1Q08465 219 aa2.53□□□□□ -2
ATG27YJL178C YOR376WQ08900 122 aa2.53□□□□□ -2
ATG27YJL178C RDI1Q12434 202 aa2.53□□□□□ -2
ATG27YJL178C QCR7P00128 127 aa2.52□□□□□ -2.01
ATG27YJL178C UTR1P21373 530 aa2.52□□□□□ -2.01
ATG27YJL178C PET18P25362 215 aa2.52□□□□□ -2.01
ATG27YJL178C MSK1P32048 576 aa2.52□□□□□ -2.01
ATG27YJL178C KRE6P32486 720 aa2.52□□□□□ -2.01
ATG27YJL178C GPX1P36014 167 aa2.52□□□□□ -2.01
ATG27YJL178C MRPL3P36516 390 aa2.52□□□□□ -2.01
ATG27YJL178C MRPL15P36523 253 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms