RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C RPL21BQ12672 160 aaKnown RBP8.15□□□□□ -1.1
MET28YIR017C YPR108W-AQ3E7B3 70 aa8.15□□□□□ -1.1
MET28YIR017C ARG80P07249 177 aa8.14□□□□□ -1.11
MET28YIR017C OLE1P21147 510 aaKnown RBP8.14□□□□□ -1.11
MET28YIR017C SUA5P32579 426 aa8.14□□□□□ -1.11
MET28YIR017C PPQ1P32945 549 aa8.14□□□□□ -1.11
MET28YIR017C CPR5P35176 225 aa8.14□□□□□ -1.11
MET28YIR017C MIA40P36046 403 aa8.14□□□□□ -1.11
MET28YIR017C SWD2P36104 329 aaPredicted RBP8.14□□□□□ -1.11
MET28YIR017C BFR1P38934 470 aaKnown RBP RIP-Chip data8.14□□□□□ -1.11not detected
MET28YIR017C PRP11Q07350 266 aaPredicted RBP8.14□□□□□ -1.11
MET28YIR017C RDL1Q12305 139 aaKnown RBP8.14□□□□□ -1.11
MET28YIR017C TFB5Q3E7C1 72 aaPredicted RBP8.14□□□□□ -1.11
MET28YIR017C SOR1P35497 357 aaKnown RBP8.13□□□□□ -1.11
MET28YIR017C POP2P39008 433 aa8.13□□□□□ -1.11
MET28YIR017C SSO2P39926 295 aa8.13□□□□□ -1.11
MET28YIR017C IRC24P40580 263 aa8.13□□□□□ -1.11
MET28YIR017C SOR2Q07786 357 aa8.13□□□□□ -1.11
MET28YIR017C SWT1Q12104 458 aa8.13□□□□□ -1.11
MET28YIR017C YLR125WQ12138 136 aa8.13□□□□□ -1.11
MET28YIR017C YOR029WQ12243 111 aa8.13□□□□□ -1.11
MET28YIR017C NGL2Q03264 515 aaKnown RBP8.12□□□□□ -1.11
MET28YIR017C THI74Q04083 370 aa8.12□□□□□ -1.11
MET28YIR017C YOL029CQ08187 201 aa8.12□□□□□ -1.11
MET28YIR017C YOL118CQ08259 102 aa8.12□□□□□ -1.11
MET28YIR017C YOR292CQ08743 309 aa8.12□□□□□ -1.11
MET28YIR017C LSB5P25369 354 aa8.11□□□□□ -1.11
MET28YIR017C GAR1P28007 205 aaKnown RBP8.11□□□□□ -1.11
MET28YIR017C MRP20P32387 263 aa8.11□□□□□ -1.11
MET28YIR017C RRF1P38771 230 aa8.11□□□□□ -1.11
MET28YIR017C PCL7P40186 285 aa8.11□□□□□ -1.11
MET28YIR017C YGR210CP42942 411 aa8.11□□□□□ -1.11
MET28YIR017C NIF3P53081 288 aa8.11□□□□□ -1.11
MET28YIR017C MRPL22P53881 309 aa8.11□□□□□ -1.11
MET28YIR017C NRG1Q03125 231 aa8.11□□□□□ -1.11
MET28YIR017C ARR2Q06597 130 aa8.11□□□□□ -1.11
MET28YIR017C YFH1Q07540 174 aa8.11□□□□□ -1.11
MET28YIR017C QCR2P07257 368 aa8.1□□□□□ -1.11
MET28YIR017C PUT1P09368 476 aa8.1□□□□□ -1.11
MET28YIR017C GRX2P17695 143 aaKnown RBP8.1□□□□□ -1.11
MET28YIR017C UTP30P36144 274 aaKnown RBP8.1□□□□□ -1.11
MET28YIR017C IKI1P38874 309 aa8.1□□□□□ -1.11
MET28YIR017C UBP8P50102 471 aa8.1□□□□□ -1.11
MET28YIR017C YGL262WP53054 175 aa8.1□□□□□ -1.11
MET28YIR017C YGL114WP53134 725 aa8.1□□□□□ -1.11
MET28YIR017C ALG6Q12001 544 aaKnown RBP8.1□□□□□ -1.11
MET28YIR017C TFC7Q12415 435 aa8.1□□□□□ -1.11
MET28YIR017C HUG1Q6Q5K6 68 aa8.1□□□□□ -1.11
MET28YIR017C BPH1P25356 2167 aa8.1□□□□□ -1.11
MET28YIR017C BOL3P39724 118 aa8.09□□□□□ -1.11
MET28YIR017C CWC25P53854 179 aaKnown RBP8.09□□□□□ -1.11
MET28YIR017C ASM4Q05166 528 aa8.09□□□□□ -1.11
MET28YIR017C RRP15Q06511 250 aaPredicted RBP8.09□□□□□ -1.11
MET28YIR017C FEX2Q08991 375 aa8.09□□□□□ -1.11
MET28YIR017C YPC1P38298 316 aa8.08□□□□□ -1.12
MET28YIR017C LSM4P40070 187 aaKnown RBP8.08□□□□□ -1.12
MET28YIR017C LPP1Q04396 274 aa8.08□□□□□ -1.12
MET28YIR017C YPD1Q07688 167 aa8.08□□□□□ -1.12
MET28YIR017C YCT1Q12235 531 aa8.08□□□□□ -1.12
MET28YIR017C TPI1P00942 248 aaKnown RBP8.07□□□□□ -1.12
MET28YIR017C ACB1P31787 87 aa8.07□□□□□ -1.12
MET28YIR017C COQ2P32378 372 aa8.07□□□□□ -1.12
MET28YIR017C REC104P33323 182 aa8.07□□□□□ -1.12
MET28YIR017C RPL13BP40212 199 aaKnown RBP8.07□□□□□ -1.12
MET28YIR017C GZF3P42944 551 aaKnown RBP8.07□□□□□ -1.12
MET28YIR017C WSC2P53832 503 aa8.07□□□□□ -1.12
MET28YIR017C YDL086WQ07505 273 aa8.07□□□□□ -1.12
MET28YIR017C HRD1Q08109 551 aa8.07□□□□□ -1.12
MET28YIR017C RPL13AQ12690 199 aaPredicted RBP8.07□□□□□ -1.12
MET28YIR017C VMA11P32842 164 aa8.06□□□□□ -1.12
MET28YIR017C SRL3P36167 246 aa8.06□□□□□ -1.12
MET28YIR017C ERV15P38312 142 aa8.06□□□□□ -1.12
MET28YIR017C SWM2P40342 146 aa8.06□□□□□ -1.12
MET28YIR017C YIR035CP40579 254 aa8.06□□□□□ -1.12
MET28YIR017C PUS4P48567 403 aaKnown RBP8.06□□□□□ -1.12
MET28YIR017C PAM18Q07914 168 aa8.06□□□□□ -1.12
MET28YIR017C FEX1Q08913 375 aa8.06□□□□□ -1.12
MET28YIR017C YOS1Q3E834 85 aa8.06□□□□□ -1.12
MET28YIR017C ERG2P32352 222 aa8.05□□□□□ -1.12
MET28YIR017C SRY1P36007 326 aa8.05□□□□□ -1.12
MET28YIR017C CBT1P36038 271 aaPredicted RBP8.05□□□□□ -1.12
MET28YIR017C ADH5P38113 351 aaKnown RBP8.05□□□□□ -1.12
MET28YIR017C ALG14P38242 237 aa8.05□□□□□ -1.12
MET28YIR017C LSM12P38828 187 aaKnown RBP8.05□□□□□ -1.12
MET28YIR017C YHR138CP38841 114 aaPredicted RBP8.05□□□□□ -1.12
MET28YIR017C YER137CP40083 148 aaKnown RBP8.05□□□□□ -1.12
MET28YIR017C SUT1P53032 299 aaKnown RBP8.05□□□□□ -1.12
MET28YIR017C MRPL50P53724 139 aa8.05□□□□□ -1.12
MET28YIR017C VPS28Q02767 242 aa8.05□□□□□ -1.12
MET28YIR017C ADH6Q04894 360 aaKnown RBP8.05□□□□□ -1.12
MET28YIR017C ROX3P25046 220 aa8.04□□□□□ -1.12
MET28YIR017C CUE1P38428 203 aa8.04□□□□□ -1.12
MET28YIR017C SAP30P38429 201 aa8.04□□□□□ -1.12
MET28YIR017C YFL015CP43578 164 aa8.04□□□□□ -1.12
MET28YIR017C YGR045CP53229 120 aa8.04□□□□□ -1.12
MET28YIR017C RPL9AP05738 191 aaKnown RBP8.03□□□□□ -1.12
MET28YIR017C YMR31P19955 123 aa8.03□□□□□ -1.12
MET28YIR017C NOP16P40007 231 aaKnown RBP8.03□□□□□ -1.12
MET28YIR017C YJL118WP47022 219 aa8.03□□□□□ -1.12
MET28YIR017C BNA1P47096 177 aa8.03□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms