RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C RMD6P39975 231 aa2.21□□□□□ -2.06
TCA17YEL048C YIL001WP40560 513 aa2.21□□□□□ -2.06
TCA17YEL048C HOP2P53187 214 aa2.21□□□□□ -2.06
TCA17YEL048C NOP19P53317 196 aaPredicted RBP2.21□□□□□ -2.06
TCA17YEL048C PRM15Q03262 622 aa2.21□□□□□ -2.06
TCA17YEL048C YET3Q07451 203 aa2.21□□□□□ -2.06
TCA17YEL048C YCL012CQ8J0M4 134 aa2.21□□□□□ -2.06
TCA17YEL048C YHR139C-AO13536 103 aa2.2□□□□□ -2.06
TCA17YEL048C PUT1P09368 476 aa2.2□□□□□ -2.06
TCA17YEL048C MER1P16523 270 aa2.2□□□□□ -2.06
TCA17YEL048C GRX2P17695 143 aaKnown RBP2.2□□□□□ -2.06
TCA17YEL048C SKG1P36169 355 aa2.2□□□□□ -2.06
TCA17YEL048C MMS2P53152 137 aa2.2□□□□□ -2.06
TCA17YEL048C CAB4P53332 305 aa2.2□□□□□ -2.06
TCA17YEL048C LSM7P53905 115 aaKnown RBP2.2□□□□□ -2.06
TCA17YEL048C PSF1Q12488 208 aa2.2□□□□□ -2.06
TCA17YEL048C RAD9P14737 1309 aa2.19□□□□□ -2.06
TCA17YEL048C CDC8P00572 216 aa2.19□□□□□ -2.06
TCA17YEL048C CDC7P06243 507 aa2.19□□□□□ -2.06
TCA17YEL048C YPR170W-BP0C5R9 85 aa2.19□□□□□ -2.06
TCA17YEL048C ADE1P27616 306 aa2.19□□□□□ -2.06
TCA17YEL048C ASF2P32448 525 aaPredicted RBP2.19□□□□□ -2.06
TCA17YEL048C SPS18P32572 300 aa2.19□□□□□ -2.06
TCA17YEL048C CAF4P36130 643 aa2.19□□□□□ -2.06
TCA17YEL048C EGD2P38879 174 aaKnown RBP2.19□□□□□ -2.06
TCA17YEL048C SNX4P47057 423 aa2.19□□□□□ -2.06
TCA17YEL048C RTC4P53850 401 aa2.19□□□□□ -2.06
TCA17YEL048C YNG1Q08465 219 aa2.19□□□□□ -2.06
TCA17YEL048C MHT1Q12525 324 aa2.19□□□□□ -2.06
TCA17YEL048C CHD1P32657 1468 aa2.19□□□□□ -2.06
TCA17YEL048C REP2P03872 296 aa2.18□□□□□ -2.06
TCA17YEL048C MSW1P04803 379 aa2.18□□□□□ -2.06
TCA17YEL048C AST2P39945 430 aaKnown RBP2.18□□□□□ -2.06
TCA17YEL048C HMF1P40037 129 aaKnown RBP2.18□□□□□ -2.06
TCA17YEL048C SMD3P43321 101 aaKnown RBP2.18□□□□□ -2.06
TCA17YEL048C YGR050CP53231 118 aa2.18□□□□□ -2.06
TCA17YEL048C COG5P53951 403 aa2.18□□□□□ -2.06
TCA17YEL048C DAD3P69850 94 aa2.18□□□□□ -2.06
TCA17YEL048C GPM2Q12008 311 aa2.18□□□□□ -2.06
TCA17YEL048C TDA8Q6B2U8 126 aa2.18□□□□□ -2.06
TCA17YEL048C YHR032W-AP0C5N6 59 aa2.17□□□□□ -2.06
TCA17YEL048C PTM1P32857 523 aa2.17□□□□□ -2.06
TCA17YEL048C SHG1P38337 142 aa2.17□□□□□ -2.06
TCA17YEL048C CTR2P38865 189 aa2.17□□□□□ -2.06
TCA17YEL048C YJL027CP47063 138 aaPredicted RBP2.17□□□□□ -2.06
TCA17YEL048C ARR2Q06597 130 aa2.17□□□□□ -2.06
TCA17YEL048C URA5P13298 226 aaKnown RBP2.16□□□□□ -2.06
TCA17YEL048C KSS1P14681 368 aa2.16□□□□□ -2.06
TCA17YEL048C MDH3P32419 343 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
TCA17YEL048C YOR062CP36025 268 aa2.16□□□□□ -2.06
TCA17YEL048C SEC72P39742 193 aaKnown RBP2.16□□□□□ -2.06
TCA17YEL048C YFR054CP43622 192 aa2.16□□□□□ -2.06
TCA17YEL048C YGR219WP53307 113 aa2.16□□□□□ -2.06
TCA17YEL048C NEJ1Q06148 342 aa2.16□□□□□ -2.06
TCA17YEL048C TSC3Q3E790 80 aa2.16□□□□□ -2.06
TCA17YEL048C YDL085C-AQ3E7B7 68 aaKnown RBP2.16□□□□□ -2.06
TCA17YEL048C MRS1P07266 363 aa2.15□□□□□ -2.07
TCA17YEL048C YLR156WP0CE96 114 aa2.15□□□□□ -2.07
TCA17YEL048C YLR159WP0CE97 114 aa2.15□□□□□ -2.07
TCA17YEL048C YLR161WP0CE98 114 aa2.15□□□□□ -2.07
TCA17YEL048C BET1P22804 142 aa2.15□□□□□ -2.07
TCA17YEL048C MEI4P29467 408 aa2.15□□□□□ -2.07
TCA17YEL048C SEC17P32602 292 aa2.15□□□□□ -2.07
TCA17YEL048C VPS51P36116 164 aa2.15□□□□□ -2.07
TCA17YEL048C FCY21P40039 528 aa2.15□□□□□ -2.07
TCA17YEL048C SWP1Q02795 286 aa2.15□□□□□ -2.07
TCA17YEL048C GAS3Q03655 524 aa2.15□□□□□ -2.07
TCA17YEL048C YDR249CQ03787 373 aa2.15□□□□□ -2.07
TCA17YEL048C FUS2Q05670 677 aa2.15□□□□□ -2.07
TCA17YEL048C IKI3Q06706 1349 aaKnown RBP2.15□□□□□ -2.07
TCA17YEL048C MRPS28P21771 286 aa2.14□□□□□ -2.07
TCA17YEL048C PDS1P40316 373 aaPredicted RBP2.14□□□□□ -2.07
TCA17YEL048C PGD1P40356 397 aa2.14□□□□□ -2.07
TCA17YEL048C AIM25P47140 327 aa2.14□□□□□ -2.07
TCA17YEL048C AIF1P52923 378 aa2.14□□□□□ -2.07
TCA17YEL048C PET191Q02772 108 aa2.14□□□□□ -2.07
TCA17YEL048C GGA1Q06336 557 aa2.14□□□□□ -2.07
TCA17YEL048C YPL162CQ12042 273 aa2.14□□□□□ -2.07
TCA17YEL048C RIO1Q12196 484 aaKnown RBP2.14□□□□□ -2.07
TCA17YEL048C USB1Q12208 290 aaKnown RBP2.14□□□□□ -2.07
TCA17YEL048C SIR2P06700 562 aa2.13□□□□□ -2.07
TCA17YEL048C SNF4P12904 322 aa2.13□□□□□ -2.07
TCA17YEL048C RPB3P16370 318 aaKnown RBP2.13□□□□□ -2.07
TCA17YEL048C CKS1P20486 150 aaKnown RBP2.13□□□□□ -2.07
TCA17YEL048C APA2P22108 325 aa2.13□□□□□ -2.07
TCA17YEL048C CNB1P25296 175 aa2.13□□□□□ -2.07
TCA17YEL048C SNC2P33328 115 aa2.13□□□□□ -2.07
TCA17YEL048C UTP30P36144 274 aaKnown RBP2.13□□□□□ -2.07
TCA17YEL048C UMP1P38293 148 aa2.13□□□□□ -2.07
TCA17YEL048C ICE2P40499 491 aa2.13□□□□□ -2.07
TCA17YEL048C PRM10P42946 383 aa2.13□□□□□ -2.07
TCA17YEL048C TRM12Q04235 462 aa2.13□□□□□ -2.07
TCA17YEL048C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
TCA17YEL048C MCP1Q12106 302 aa2.13□□□□□ -2.07
TCA17YEL048C ATO3Q12359 275 aa2.13□□□□□ -2.07
TCA17YEL048C PEX4P29340 183 aa2.12□□□□□ -2.07
TCA17YEL048C GLE2P40066 365 aa2.12□□□□□ -2.07
TCA17YEL048C POG1P40473 351 aa2.12□□□□□ -2.07
TCA17YEL048C YKE4P40544 346 aa2.12□□□□□ -2.07
TCA17YEL048C CIS3P47001 227 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms