RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeastyeast

Gene PBP4, Length 558 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP4YDL053C RPL9BP51401 191 aaKnown RBP1.52□□□□□ -2.17
PBP4YDL053C YIP3P53633 176 aa1.52□□□□□ -2.17
PBP4YDL053C YET3Q07451 203 aa1.52□□□□□ -2.17
PBP4YDL053C BRX1Q08235 291 aaKnown RBP1.52□□□□□ -2.17
PBP4YDL053C MSA1Q08471 629 aa1.52□□□□□ -2.17
PBP4YDL053C JLP1Q12358 412 aa1.52□□□□□ -2.17
PBP4YDL053C YPL229WQ99395 206 aa1.52□□□□□ -2.17
PBP4YDL053C HTL1Q9URQ5 78 aa1.52□□□□□ -2.17
PBP4YDL053C RPL28P02406 149 aaKnown RBP1.51□□□□□ -2.17
PBP4YDL053C QCR2P07257 368 aa1.51□□□□□ -2.17
PBP4YDL053C BCY1P07278 416 aaKnown RBP1.51□□□□□ -2.17
PBP4YDL053C URA6P15700 204 aa1.51□□□□□ -2.17
PBP4YDL053C GRX2P17695 143 aaKnown RBP1.51□□□□□ -2.17
PBP4YDL053C PHO88P38264 188 aaPredicted RBP1.51□□□□□ -2.17
PBP4YDL053C AME1P38313 324 aa1.51□□□□□ -2.17
PBP4YDL053C SRP14P38985 146 aa1.51□□□□□ -2.17
PBP4YDL053C YER121WP40076 114 aa1.51□□□□□ -2.17
PBP4YDL053C BMT5P40493 336 aa1.51□□□□□ -2.17
PBP4YDL053C RPA43P46669 326 aa1.51□□□□□ -2.17
PBP4YDL053C YJR056CP47115 236 aa1.51□□□□□ -2.17
PBP4YDL053C ADO1P47143 340 aaKnown RBP1.51□□□□□ -2.17
PBP4YDL053C NSA1P53136 463 aaPredicted RBP1.51□□□□□ -2.17
PBP4YDL053C YGR219WP53307 113 aa1.51□□□□□ -2.17
PBP4YDL053C YNL140CP53910 189 aa1.51□□□□□ -2.17
PBP4YDL053C FYV6P53913 173 aa1.51□□□□□ -2.17
PBP4YDL053C CYT2Q00873 224 aa1.51□□□□□ -2.17
PBP4YDL053C NEJ1Q06148 342 aa1.51□□□□□ -2.17
PBP4YDL053C ATG39Q06159 398 aa1.51□□□□□ -2.17
PBP4YDL053C NIP7Q08962 181 aaKnown RBP1.51□□□□□ -2.17
PBP4YDL053C TUS1Q06412 1307 aa1.5□□□□□ -2.17
PBP4YDL053C MSW1P04803 379 aa1.5□□□□□ -2.17
PBP4YDL053C CDC7P06243 507 aa1.5□□□□□ -2.17
PBP4YDL053C OAC1P32332 324 aa1.5□□□□□ -2.17
PBP4YDL053C FIG1P38224 298 aa1.5□□□□□ -2.17
PBP4YDL053C RPF1P38805 295 aaKnown RBP1.5□□□□□ -2.17
PBP4YDL053C YHR180WP38868 163 aa1.5□□□□□ -2.17
PBP4YDL053C YAR068WP39564 161 aa1.5□□□□□ -2.17
PBP4YDL053C YMR144WP40214 342 aaKnown RBP1.5□□□□□ -2.17
PBP4YDL053C CAT5P41735 233 aa1.5□□□□□ -2.17
PBP4YDL053C LSM1P47017 172 aaKnown RBP1.5□□□□□ -2.17
PBP4YDL053C MCM22P47167 239 aa1.5□□□□□ -2.17
PBP4YDL053C YJR149WP47177 404 aa1.5□□□□□ -2.17
PBP4YDL053C ALG13P53178 202 aa1.5□□□□□ -2.17
PBP4YDL053C SPC2Q04969 178 aa1.5□□□□□ -2.17
PBP4YDL053C GGA1Q06336 557 aa1.5□□□□□ -2.17
PBP4YDL053C ARR2Q06597 130 aa1.5□□□□□ -2.17
PBP4YDL053C HEM25Q07534 307 aa1.5□□□□□ -2.17
PBP4YDL053C GRE1Q08969 168 aa1.5□□□□□ -2.17
PBP4YDL053C YLR126CQ12288 251 aa1.5□□□□□ -2.17
PBP4YDL053C MEI4P29467 408 aa1.49□□□□□ -2.17
PBP4YDL053C TRR1P29509 319 aaKnown RBP1.49□□□□□ -2.17
PBP4YDL053C CAF4P36130 643 aa1.49□□□□□ -2.17
PBP4YDL053C YCR087C-AP37263 153 aa1.49□□□□□ -2.17
PBP4YDL053C POP7P38291 140 aa1.49□□□□□ -2.17
PBP4YDL053C ERV15P38312 142 aa1.49□□□□□ -2.17
PBP4YDL053C YHR022CP38763 256 aa1.49□□□□□ -2.17
PBP4YDL053C TRM9P49957 279 aa1.49□□□□□ -2.17
PBP4YDL053C ERG25P53045 309 aa1.49□□□□□ -2.17
PBP4YDL053C BRR6P53062 197 aa1.49□□□□□ -2.17
PBP4YDL053C PDR17P53844 350 aa1.49□□□□□ -2.17
PBP4YDL053C YLR460CP54007 376 aa1.49□□□□□ -2.17
PBP4YDL053C SNO1Q03144 224 aa1.49□□□□□ -2.17
PBP4YDL053C YNG1Q08465 219 aa1.49□□□□□ -2.17
PBP4YDL053C TPO4Q12256 659 aa1.49□□□□□ -2.17
PBP4YDL053C YOR020W-AQ3E824 90 aa1.49□□□□□ -2.17
PBP4YDL053C YHR139C-AO13536 103 aa1.48□□□□□ -2.17
PBP4YDL053C FCY2P17064 533 aa1.48□□□□□ -2.17
PBP4YDL053C MGT1P26188 188 aa1.48□□□□□ -2.17
PBP4YDL053C SRP102P36057 244 aaPredicted RBP1.48□□□□□ -2.17
PBP4YDL053C MRPL28P36527 147 aa1.48□□□□□ -2.17
PBP4YDL053C ECM33P38248 429 aaKnown RBP1.48□□□□□ -2.17
PBP4YDL053C YKE4P40544 346 aa1.48□□□□□ -2.17
PBP4YDL053C PRM10P42946 383 aa1.48□□□□□ -2.17
PBP4YDL053C MMS2P53152 137 aa1.48□□□□□ -2.17
PBP4YDL053C JAC1P53193 184 aa1.48□□□□□ -2.17
PBP4YDL053C NRK1P53915 240 aa1.48□□□□□ -2.17
PBP4YDL053C NSL1Q12143 216 aa1.48□□□□□ -2.17
PBP4YDL053C USB1Q12208 290 aaKnown RBP1.48□□□□□ -2.17
PBP4YDL053C DDI2P0CH63 225 aa1.47□□□□□ -2.17
PBP4YDL053C DDI3P0CH64 225 aa1.47□□□□□ -2.17
PBP4YDL053C GCN3P14741 305 aa1.47□□□□□ -2.17
PBP4YDL053C MDH2P22133 377 aa1.47□□□□□ -2.17
PBP4YDL053C NUF2P33895 451 aa1.47□□□□□ -2.17
PBP4YDL053C SRY1P36007 326 aa1.47□□□□□ -2.17
PBP4YDL053C DER1P38307 211 aa1.47□□□□□ -2.17
PBP4YDL053C DSE2P38844 325 aa1.47□□□□□ -2.17
PBP4YDL053C VTC1P40046 129 aaRIP-Chip data1.47□□□□□ -2.17not detected
PBP4YDL053C YER135CP40082 130 aa1.47□□□□□ -2.17
PBP4YDL053C SOK1P40317 901 aa1.47□□□□□ -2.17
PBP4YDL053C ILM1P47155 203 aa1.47□□□□□ -2.17
PBP4YDL053C TOS8P53147 276 aa1.47□□□□□ -2.17
PBP4YDL053C YDC1Q02896 317 aa1.47□□□□□ -2.17
PBP4YDL053C YLR050CQ12155 161 aaKnown RBP1.47□□□□□ -2.17
PBP4YDL053C LSO2Q3E772 92 aaKnown RBP1.47□□□□□ -2.17
PBP4YDL053C CDC28P00546 298 aaKnown RBP1.46□□□□□ -2.18
PBP4YDL053C RPS28BP0C0X0 67 aaKnown RBP1.46□□□□□ -2.18
PBP4YDL053C GCY1P14065 312 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
PBP4YDL053C TAH1P25638 111 aaPredicted RBP1.46□□□□□ -2.18
PBP4YDL053C SPS18P32572 300 aa1.46□□□□□ -2.18
PBP4YDL053C EDC3P39998 551 aaKnown RBP1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 83.1 ms