RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	YML096W	Q04489	525 aa		0.95	□□□□□ -2.26
YPR039W	YPR039W	YLR126C	Q12288	251 aa		0.95	□□□□□ -2.26
YPR039W	YPR039W	RRP36	Q12481	300 aa	Predicted RBP	0.95	□□□□□ -2.26
YPR039W	YPR039W	RPL13A	Q12690	199 aa	Predicted RBP	0.95	□□□□□ -2.26
YPR039W	YPR039W	MEI4	P29467	408 aa		0.94	□□□□□ -2.26
YPR039W	YPR039W	RIB1	P38066	345 aa		0.94	□□□□□ -2.26
YPR039W	YPR039W	HOC1	P47124	396 aa		0.94	□□□□□ -2.26
YPR039W	YPR039W	ERV29	P53337	310 aa		0.94	□□□□□ -2.26
YPR039W	YPR039W	ABF2	Q02486	183 aa		0.94	□□□□□ -2.26
YPR039W	YPR039W	YHR139C-A	O13536	103 aa		0.93	□□□□□ -2.26
YPR039W	YPR039W	RPT5	P33297	434 aa	Known RBP	0.93	□□□□□ -2.26
YPR039W	YPR039W	UPS2	P35200	230 aa		0.93	□□□□□ -2.26
YPR039W	YPR039W	PGD1	P40356	397 aa		0.93	□□□□□ -2.26
YPR039W	YPR039W	ICE2	P40499	491 aa		0.93	□□□□□ -2.26
YPR039W	YPR039W	BNA6	P43619	295 aa		0.93	□□□□□ -2.26
YPR039W	YPR039W	MRPL50	P53724	139 aa		0.93	□□□□□ -2.26
YPR039W	YPR039W	PAM18	Q07914	168 aa		0.93	□□□□□ -2.26
YPR039W	YPR039W	SPG3	Q04398	127 aa	Predicted RBP	0.92	□□□□□ -2.26
YPR039W	YPR039W	KRE28	Q04431	385 aa		0.92	□□□□□ -2.26
YPR039W	YPR039W	RRT8	Q08219	342 aa		0.92	□□□□□ -2.26
YPR039W	YPR039W	ATG31	Q12421	196 aa		0.92	□□□□□ -2.26
YPR039W	YPR039W	PSF1	Q12488	208 aa		0.92	□□□□□ -2.26
YPR039W	YPR039W	UBR2	Q07963	1872 aa		0.92	□□□□□ -2.26
YPR039W	YPR039W	RPL27B	P0C2H7	136 aa	Known RBP	0.91	□□□□□ -2.26
YPR039W	YPR039W	YPR170W-B	P0C5R9	85 aa		0.91	□□□□□ -2.26
YPR039W	YPR039W	GPA2	P10823	449 aa		0.91	□□□□□ -2.26
YPR039W	YPR039W	FZF1	P32805	299 aa		0.91	□□□□□ -2.26
YPR039W	YPR039W	YUH1	P35127	236 aa		0.91	□□□□□ -2.26
YPR039W	YPR039W	YNL217W	P40152	326 aa		0.91	□□□□□ -2.26
YPR039W	YPR039W	PEX17	P40155	199 aa		0.91	□□□□□ -2.26
YPR039W	YPR039W	YJR149W	P47177	404 aa		0.91	□□□□□ -2.26
YPR039W	YPR039W	AIF1	P52923	378 aa		0.91	□□□□□ -2.26
YPR039W	YPR039W	BOL2	P53082	120 aa		0.91	□□□□□ -2.26
YPR039W	YPR039W	YNL134C	P53912	376 aa	Known RBP	0.91	□□□□□ -2.26
YPR039W	YPR039W	YNL010W	P53981	241 aa	Known RBP	0.91	□□□□□ -2.26
YPR039W	YPR039W	YMD8	Q03697	442 aa		0.91	□□□□□ -2.26
YPR039W	YPR039W	YML108W	Q03759	105 aa		0.91	□□□□□ -2.26
YPR039W	YPR039W	TRM12	Q04235	462 aa		0.91	□□□□□ -2.26
YPR039W	YPR039W	YLR173W	Q06247	608 aa		0.91	□□□□□ -2.26
YPR039W	YPR039W	RIO1	Q12196	484 aa	Known RBP	0.91	□□□□□ -2.26
YPR039W	YPR039W	SRB4	P32569	687 aa		0.9	□□□□□ -2.27
YPR039W	YPR039W	MCM22	P47167	239 aa		0.9	□□□□□ -2.27
YPR039W	YPR039W	QCR8	P08525	94 aa		0.89	□□□□□ -2.27
YPR039W	YPR039W	MRPL25	P23369	157 aa		0.89	□□□□□ -2.27
YPR039W	YPR039W	TMA19	P35691	167 aa	Known RBP	0.89	□□□□□ -2.27
YPR039W	YPR039W	CUE1	P38428	203 aa		0.89	□□□□□ -2.27
YPR039W	YPR039W	IRC22	P40006	225 aa		0.89	□□□□□ -2.27
YPR039W	YPR039W	YRB2	P40517	327 aa		0.89	□□□□□ -2.27
YPR039W	YPR039W	TRM9	P49957	279 aa		0.89	□□□□□ -2.27
YPR039W	YPR039W	DID2	P69771	204 aa		0.89	□□□□□ -2.27
YPR039W	YPR039W	REP2	P03872	296 aa		0.88	□□□□□ -2.27
YPR039W	YPR039W	MRPS28	P21771	286 aa		0.88	□□□□□ -2.27
YPR039W	YPR039W	VPS21	P36017	210 aa	Known RBP	0.88	□□□□□ -2.27
YPR039W	YPR039W	URA8	P38627	578 aa	Predicted RBP	0.88	□□□□□ -2.27
YPR039W	YPR039W	GAA1	P39012	614 aa		0.88	□□□□□ -2.27
YPR039W	YPR039W	DOC1	P53068	250 aa		0.88	□□□□□ -2.27
YPR039W	YPR039W	MED4	Q12343	284 aa		0.88	□□□□□ -2.27
YPR039W	YPR039W	LSO2	Q3E772	92 aa	Known RBP	0.88	□□□□□ -2.27
YPR039W	YPR039W	BCY1	P07278	416 aa	Known RBP	0.87	□□□□□ -2.27
YPR039W	YPR039W	RPO26	P20435	155 aa		0.87	□□□□□ -2.27
YPR039W	YPR039W	ATG22	P25568	528 aa		0.87	□□□□□ -2.27
YPR039W	YPR039W	YET1	P35723	206 aa		0.87	□□□□□ -2.27
YPR039W	YPR039W	LDB7	P38210	180 aa		0.87	□□□□□ -2.27
YPR039W	YPR039W	TCD1	P38756	429 aa		0.87	□□□□□ -2.27
YPR039W	YPR039W	DOG2	P38773	246 aa		0.87	□□□□□ -2.27
YPR039W	YPR039W	NUP84	P52891	726 aa		0.87	□□□□□ -2.27
YPR039W	YPR039W	NSA1	P53136	463 aa	Predicted RBP	0.87	□□□□□ -2.27
YPR039W	YPR039W	SRL4	Q03085	281 aa		0.87	□□□□□ -2.27
YPR039W	YPR039W	SNZ1	Q03148	297 aa		0.87	□□□□□ -2.27
YPR039W	YPR039W	LPP1	Q04396	274 aa		0.87	□□□□□ -2.27
YPR039W	YPR039W	ANT1	Q06497	328 aa		0.87	□□□□□ -2.27
YPR039W	YPR039W	YPL162C	Q12042	273 aa		0.87	□□□□□ -2.27
YPR039W	YPR039W	MET5	P47169	1442 aa		0.87	□□□□□ -2.27
YPR039W	YPR039W	CPA1	P07258	411 aa	Known RBP	0.86	□□□□□ -2.27
YPR039W	YPR039W	CDC10	P25342	322 aa	Known RBP	0.86	□□□□□ -2.27
YPR039W	YPR039W	NTF2	P33331	125 aa	Known RBP	0.86	□□□□□ -2.27
YPR039W	YPR039W	FMC1	P40491	155 aa		0.86	□□□□□ -2.27
YPR039W	YPR039W	NUP57	P48837	541 aa		0.86	□□□□□ -2.27
YPR039W	YPR039W	SAY1	P53324	424 aa		0.86	□□□□□ -2.27
YPR039W	YPR039W	MPA43	P53583	542 aa	Predicted RBP	0.86	□□□□□ -2.27
YPR039W	YPR039W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.86	□□□□□ -2.27	not detected
YPR039W	YPR039W	SPT3	P06844	337 aa		0.85	□□□□□ -2.27
YPR039W	YPR039W	YLR156W	P0CE96	114 aa		0.85	□□□□□ -2.27
YPR039W	YPR039W	YLR159W	P0CE97	114 aa		0.85	□□□□□ -2.27
YPR039W	YPR039W	YLR161W	P0CE98	114 aa		0.85	□□□□□ -2.27
YPR039W	YPR039W	MRPL28	P36527	147 aa		0.85	□□□□□ -2.27
YPR039W	YPR039W	UMP1	P38293	148 aa		0.85	□□□□□ -2.27
YPR039W	YPR039W	POP4	P38336	279 aa		0.85	□□□□□ -2.27
YPR039W	YPR039W	YNR077C	P53758	84 aa		0.85	□□□□□ -2.27
YPR039W	YPR039W	SWP1	Q02795	286 aa		0.85	□□□□□ -2.27
YPR039W	YPR039W	YDR248C	Q03786	193 aa		0.85	□□□□□ -2.27
YPR039W	YPR039W	PDR18	P53756	1333 aa		0.85	□□□□□ -2.27
YPR039W	YPR039W	VAR1	P02381	398 aa		0.84	□□□□□ -2.27
YPR039W	YPR039W	TFC1	P32367	649 aa		0.84	□□□□□ -2.27
YPR039W	YPR039W	ERJ5	P43613	295 aa	Predicted RBP	0.84	□□□□□ -2.27
YPR039W	YPR039W	UBC7	Q02159	165 aa		0.84	□□□□□ -2.27
YPR039W	YPR039W	TSC3	Q3E790	80 aa		0.84	□□□□□ -2.27
YPR039W	YPR039W	DRS2	P39524	1355 aa		0.83	□□□□□ -2.28
YPR039W	YPR039W	URA6	P15700	204 aa		0.83	□□□□□ -2.28
YPR039W	YPR039W	YCR016W	P25617	290 aa	Known RBP	0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 80.1 ms