RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C ATP3P38077 311 aaKnown RBP7.56□□□□□ -1.2
RPD3YNL330C XBP1P40489 647 aa7.56□□□□□ -1.2
RPD3YNL330C CTK2P46962 323 aa7.56□□□□□ -1.2
RPD3YNL330C YJL016WP47072 561 aa7.56□□□□□ -1.2
RPD3YNL330C ASK10P48361 1146 aa7.56□□□□□ -1.2
RPD3YNL330C HOL1P53389 586 aa7.56□□□□□ -1.2
RPD3YNL330C RSM23Q01163 450 aa7.56□□□□□ -1.2
RPD3YNL330C MAP1Q01662 387 aaKnown RBP RIP-Chip data7.56□□□□□ -1.2not detected
RPD3YNL330C MDM30Q05930 598 aa7.56□□□□□ -1.2
RPD3YNL330C YDL086WQ07505 273 aa7.56□□□□□ -1.2
RPD3YNL330C DGK1Q12382 290 aa7.56□□□□□ -1.2
RPD3YNL330C CMC2Q3E7A4 109 aa7.56□□□□□ -1.2
RPD3YNL330C CDC7P06243 507 aa7.55□□□□□ -1.2
RPD3YNL330C CDC26P14724 124 aa7.55□□□□□ -1.2
RPD3YNL330C SIP1P32578 815 aa7.55□□□□□ -1.2
RPD3YNL330C AGA2P32781 87 aa7.55□□□□□ -1.2
RPD3YNL330C YBR292CP38357 123 aa7.55□□□□□ -1.2
RPD3YNL330C NSA1P53136 463 aaPredicted RBP7.55□□□□□ -1.2
RPD3YNL330C TIM21P53220 239 aa7.55□□□□□ -1.2
RPD3YNL330C YNR048WP53740 393 aa7.55□□□□□ -1.2
RPD3YNL330C FAS1P07149 2051 aaKnown RBP7.54□□□□□ -1.2
RPD3YNL330C ADH3P07246 375 aaKnown RBP7.54□□□□□ -1.2
RPD3YNL330C YHR214C-DP0CX93 97 aa7.54□□□□□ -1.2
RPD3YNL330C RPL30P14120 105 aaKnown RBP7.54□□□□□ -1.2
RPD3YNL330C CKA1P15790 372 aa7.54□□□□□ -1.2
RPD3YNL330C SNF5P18480 905 aa7.54□□□□□ -1.2
RPD3YNL330C MRPL4P36517 319 aa7.54□□□□□ -1.2
RPD3YNL330C ERV15P38312 142 aa7.54□□□□□ -1.2
RPD3YNL330C RMD6P39975 231 aa7.54□□□□□ -1.2
RPD3YNL330C SHO1P40073 367 aa7.54□□□□□ -1.2
RPD3YNL330C GWT1P47026 490 aa7.54□□□□□ -1.2
RPD3YNL330C YNR066CP53752 436 aa7.54□□□□□ -1.2
RPD3YNL330C YIF1P53845 314 aaKnown RBP7.54□□□□□ -1.2
RPD3YNL330C MEH1Q02205 184 aa7.54□□□□□ -1.2
RPD3YNL330C ADD37Q03233 198 aa7.54□□□□□ -1.2
RPD3YNL330C YMR253CQ04835 414 aa7.54□□□□□ -1.2
RPD3YNL330C GRE1Q08969 168 aa7.54□□□□□ -1.2
RPD3YNL330C BEM2P39960 2167 aaKnown RBP7.54□□□□□ -1.2
RPD3YNL330C CDC28P00546 298 aaKnown RBP7.53□□□□□ -1.2
RPD3YNL330C GDH1P07262 454 aaKnown RBP7.53□□□□□ -1.2
RPD3YNL330C YFR010W-AP0C5N0 62 aa7.53□□□□□ -1.2
RPD3YNL330C GLC7P32598 312 aaKnown RBP7.53□□□□□ -1.2
RPD3YNL330C CDS1P38221 457 aa7.53□□□□□ -1.2
RPD3YNL330C FIG1P38224 298 aa7.53□□□□□ -1.2
RPD3YNL330C SLM1P40485 686 aa7.53□□□□□ -1.2
RPD3YNL330C AIR1P40507 360 aaKnown RBP7.53□□□□□ -1.2
RPD3YNL330C VMA21P41806 77 aa7.53□□□□□ -1.2
RPD3YNL330C RPA34P47006 233 aaPredicted RBP7.53□□□□□ -1.2
RPD3YNL330C HHT1P61830 136 aa7.53□□□□□ -1.2
RPD3YNL330C CGI121Q03705 181 aaKnown RBP7.53□□□□□ -1.2
RPD3YNL330C YDR415CQ04033 374 aaPredicted RBP7.53□□□□□ -1.2
RPD3YNL330C CRR1Q05790 422 aa7.53□□□□□ -1.2
RPD3YNL330C BDS1Q08347 646 aa7.53□□□□□ -1.2
RPD3YNL330C AIM45Q12480 344 aaKnown RBP7.53□□□□□ -1.2
RPD3YNL330C TDH3P00359 332 aaKnown RBP RIP-Chip data7.52□□□□□ -1.2not detected
RPD3YNL330C COX5BP00425 151 aa7.52□□□□□ -1.2
RPD3YNL330C RPP2BP02400 110 aaKnown RBP7.52□□□□□ -1.2
RPD3YNL330C PET494P07390 489 aaPredicted RBP7.52□□□□□ -1.2
RPD3YNL330C PDX1P16451 410 aa7.52□□□□□ -1.2
RPD3YNL330C CLB6P32943 380 aa7.52□□□□□ -1.2
RPD3YNL330C YBR096WP38256 230 aa7.52□□□□□ -1.2
RPD3YNL330C SLM6P38343 150 aa7.52□□□□□ -1.2
RPD3YNL330C IMD2P38697 523 aaKnown RBP7.52□□□□□ -1.2
RPD3YNL330C YHR210CP38893 341 aa7.52□□□□□ -1.2
RPD3YNL330C POP2P39008 433 aa7.52□□□□□ -1.2
RPD3YNL330C YND1P40009 630 aa7.52□□□□□ -1.2
RPD3YNL330C TOK1P40310 691 aa7.52□□□□□ -1.2
RPD3YNL330C REE1P40893 198 aa7.52□□□□□ -1.2
RPD3YNL330C IKS1P47042 667 aa7.52□□□□□ -1.2
RPD3YNL330C DAN1P47178 298 aa7.52□□□□□ -1.2
RPD3YNL330C YML053CQ04978 212 aa7.52□□□□□ -1.2
RPD3YNL330C ASM4Q05166 528 aa7.52□□□□□ -1.2
RPD3YNL330C YPR063CQ12160 140 aa7.52□□□□□ -1.2
RPD3YNL330C USB1Q12208 290 aaKnown RBP7.52□□□□□ -1.2
RPD3YNL330C YLR365WQ7LIF2 110 aa7.52□□□□□ -1.2
RPD3YNL330C COX1P00401 534 aa7.52□□□□□ -1.21
RPD3YNL330C YLL053CP0CD98 152 aa7.52□□□□□ -1.21
RPD3YNL330C PCL1P24867 279 aa7.52□□□□□ -1.21
RPD3YNL330C YCR101CP25607 182 aa7.52□□□□□ -1.21
RPD3YNL330C PEX4P29340 183 aa7.52□□□□□ -1.21
RPD3YNL330C SDH4P37298 181 aa7.52□□□□□ -1.21
RPD3YNL330C CUP9P41817 306 aa7.52□□□□□ -1.21
RPD3YNL330C PGU1P47180 361 aa7.52□□□□□ -1.21
RPD3YNL330C MSY1P48527 492 aa7.52□□□□□ -1.21
RPD3YNL330C SLX9P53251 210 aaPredicted RBP7.52□□□□□ -1.21
RPD3YNL330C PBP1P53297 722 aaKnown RBP7.52□□□□□ -1.21
RPD3YNL330C YMR082CQ04276 118 aa7.52□□□□□ -1.21
RPD3YNL330C GMC1Q04399 608 aa7.52□□□□□ -1.21
RPD3YNL330C YDR286CQ05530 114 aa7.52□□□□□ -1.21
RPD3YNL330C YOL029CQ08187 201 aa7.52□□□□□ -1.21
RPD3YNL330C MET3P08536 511 aa7.51□□□□□ -1.21
RPD3YNL330C RPB3P16370 318 aaKnown RBP7.51□□□□□ -1.21
RPD3YNL330C VMA3P25515 160 aa7.51□□□□□ -1.21
RPD3YNL330C OCH1P31755 480 aa7.51□□□□□ -1.21
RPD3YNL330C REC114P32841 428 aa7.51□□□□□ -1.21
RPD3YNL330C SWD2P36104 329 aaPredicted RBP7.51□□□□□ -1.21
RPD3YNL330C ARC40P38328 384 aaKnown RBP7.51□□□□□ -1.21
RPD3YNL330C YJR012CP47087 207 aa7.51□□□□□ -1.21
RPD3YNL330C PUS4P48567 403 aaKnown RBP7.51□□□□□ -1.21
RPD3YNL330C ERG25P53045 309 aa7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms