RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W BCY1P07278 416 aaKnown RBP1.82□□□□□ -2.12
SRP1YNL189W FCY2P17064 533 aa1.82□□□□□ -2.12
SRP1YNL189W PBN1P25580 416 aa1.82□□□□□ -2.12
SRP1YNL189W MGM101P32787 269 aaKnown RBP1.82□□□□□ -2.12
SRP1YNL189W VMA11P32842 164 aa1.82□□□□□ -2.12
SRP1YNL189W SIP3P38717 1229 aa1.82□□□□□ -2.12
SRP1YNL189W HAM1P47119 197 aaKnown RBP1.82□□□□□ -2.12
SRP1YNL189W MCM22P47167 239 aa1.82□□□□□ -2.12
SRP1YNL189W NSA1P53136 463 aaPredicted RBP1.82□□□□□ -2.12
SRP1YNL189W YCL012CQ8J0M4 134 aa1.82□□□□□ -2.12
SRP1YNL189W PUT1P09368 476 aa1.81□□□□□ -2.12
SRP1YNL189W YMR31P19955 123 aa1.81□□□□□ -2.12
SRP1YNL189W TAF14P35189 244 aa1.81□□□□□ -2.12
SRP1YNL189W YER034WP40022 185 aaKnown RBP1.81□□□□□ -2.12
SRP1YNL189W YGR026WP53217 278 aa1.81□□□□□ -2.12
SRP1YNL189W TPO4Q12256 659 aa1.81□□□□□ -2.12
SRP1YNL189W ATO3Q12359 275 aa1.81□□□□□ -2.12
SRP1YNL189W SEY1Q99287 776 aa1.81□□□□□ -2.12
SRP1YNL189W GRX2P17695 143 aaKnown RBP1.8□□□□□ -2.12
SRP1YNL189W VMA6P32366 345 aaKnown RBP1.8□□□□□ -2.12
SRP1YNL189W YAR068WP39564 161 aa1.8□□□□□ -2.12
SRP1YNL189W ERG28P40030 148 aa1.8□□□□□ -2.12
SRP1YNL189W CWC23P52868 283 aaPredicted RBP1.8□□□□□ -2.12
SRP1YNL189W GIM3P53900 129 aa1.8□□□□□ -2.12
SRP1YNL189W YML096WQ04489 525 aa1.8□□□□□ -2.12
SRP1YNL189W CDC123Q05791 360 aa1.8□□□□□ -2.12
SRP1YNL189W SSQ1Q05931 657 aaPredicted RBP1.8□□□□□ -2.12
SRP1YNL189W SMD2Q06217 110 aaKnown RBP1.8□□□□□ -2.12
SRP1YNL189W YOR020W-AQ3E824 90 aa1.8□□□□□ -2.12
SRP1YNL189W YDR157WA0A023PZE8 133 aa1.8□□□□□ -2.12
SRP1YNL189W RME1P32338 300 aaKnown RBP1.8□□□□□ -2.12
SRP1YNL189W ARC19P33204 171 aaKnown RBP1.8□□□□□ -2.12
SRP1YNL189W CBT1P36038 271 aaPredicted RBP1.8□□□□□ -2.12
SRP1YNL189W YBR063CP38083 404 aa1.8□□□□□ -2.12
SRP1YNL189W TCD1P38756 429 aa1.8□□□□□ -2.12
SRP1YNL189W YHR180WP38868 163 aa1.8□□□□□ -2.12
SRP1YNL189W MRPS8Q03799 155 aa1.8□□□□□ -2.12
SRP1YNL189W ADH3P07246 375 aaKnown RBP1.79□□□□□ -2.12
SRP1YNL189W URA6P15700 204 aa1.79□□□□□ -2.12
SRP1YNL189W COQ1P18900 473 aa1.79□□□□□ -2.12
SRP1YNL189W ADE1P27616 306 aa1.79□□□□□ -2.12
SRP1YNL189W PPA2P28239 310 aa1.79□□□□□ -2.12
SRP1YNL189W PRP18P33411 251 aaPredicted RBP1.79□□□□□ -2.12
SRP1YNL189W YJR056CP47115 236 aa1.79□□□□□ -2.12
SRP1YNL189W ILM1P47155 203 aa1.79□□□□□ -2.12
SRP1YNL189W ARR2Q06597 130 aa1.79□□□□□ -2.12
SRP1YNL189W HEM25Q07534 307 aa1.79□□□□□ -2.12
SRP1YNL189W CDC28P00546 298 aaKnown RBP1.78□□□□□ -2.12
SRP1YNL189W SPT3P06844 337 aa1.78□□□□□ -2.12
SRP1YNL189W YPR170W-BP0C5R9 85 aa1.78□□□□□ -2.12
SRP1YNL189W NHP6BP11633 99 aaKnown RBP1.78□□□□□ -2.12
SRP1YNL189W YPK2P18961 677 aa1.78□□□□□ -2.12
SRP1YNL189W SCL1P21243 252 aaKnown RBP1.78□□□□□ -2.12
SRP1YNL189W RPL24BP24000 155 aaKnown RBP1.78□□□□□ -2.12
SRP1YNL189W DOG1P38774 246 aa1.78□□□□□ -2.12
SRP1YNL189W YNL194CP40169 301 aa1.78□□□□□ -2.12
SRP1YNL189W CGR1P53188 120 aa1.78□□□□□ -2.12
SRP1YNL189W CUS2P53830 285 aaPredicted RBP1.78□□□□□ -2.12
SRP1YNL189W TRM12Q04235 462 aa1.78□□□□□ -2.12
SRP1YNL189W DRS2P39524 1355 aa1.78□□□□□ -2.13
SRP1YNL189W MSW1P04803 379 aa1.77□□□□□ -2.13
SRP1YNL189W RPL9AP05738 191 aaKnown RBP1.77□□□□□ -2.13
SRP1YNL189W DBF2P22204 572 aa1.77□□□□□ -2.13
SRP1YNL189W PRX1P34227 261 aaKnown RBP1.77□□□□□ -2.13
SRP1YNL189W IRC22P40006 225 aa1.77□□□□□ -2.13
SRP1YNL189W CIS3P47001 227 aa1.77□□□□□ -2.13
SRP1YNL189W MIC26P50087 233 aa1.77□□□□□ -2.13
SRP1YNL189W RPL9BP51401 191 aaKnown RBP1.77□□□□□ -2.13
SRP1YNL189W NEJ1Q06148 342 aa1.77□□□□□ -2.13
SRP1YNL189W BEM2P39960 2167 aaKnown RBP1.77□□□□□ -2.13
SRP1YNL189W PEX4P29340 183 aa1.77□□□□□ -2.13
SRP1YNL189W COX15P40086 486 aa1.77□□□□□ -2.13
SRP1YNL189W YIL001WP40560 513 aa1.77□□□□□ -2.13
SRP1YNL189W MGA1P53050 456 aa1.77□□□□□ -2.13
SRP1YNL189W YGR219WP53307 113 aa1.77□□□□□ -2.13
SRP1YNL189W NOP19P53317 196 aaPredicted RBP1.77□□□□□ -2.13
SRP1YNL189W PRM15Q03262 622 aa1.77□□□□□ -2.13
SRP1YNL189W BNA7Q04066 261 aa1.77□□□□□ -2.13
SRP1YNL189W SPG3Q04398 127 aaPredicted RBP1.77□□□□□ -2.13
SRP1YNL189W GET4Q12125 312 aa1.77□□□□□ -2.13
SRP1YNL189W KSS1P14681 368 aa1.76□□□□□ -2.13
SRP1YNL189W RFA3P26755 122 aaKnown RBP1.76□□□□□ -2.13
SRP1YNL189W OAC1P32332 324 aa1.76□□□□□ -2.13
SRP1YNL189W PRE6P40303 254 aaKnown RBP1.76□□□□□ -2.13
SRP1YNL189W PRM10P42946 383 aa1.76□□□□□ -2.13
SRP1YNL189W HOP2P53187 214 aa1.76□□□□□ -2.13
SRP1YNL189W FYV6P53913 173 aa1.76□□□□□ -2.13
SRP1YNL189W QCR7P00128 127 aa1.75□□□□□ -2.13
SRP1YNL189W RPL28P02406 149 aaKnown RBP1.75□□□□□ -2.13
SRP1YNL189W YBR121C-AP0C5L4 52 aa1.75□□□□□ -2.13
SRP1YNL189W MATALPHA2P0CY08 210 aa1.75□□□□□ -2.13
SRP1YNL189W HMLALPHA2P0CY09 210 aa1.75□□□□□ -2.13
SRP1YNL189W MDH3P32419 343 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
SRP1YNL189W LSM4P40070 187 aaKnown RBP1.75□□□□□ -2.13
SRP1YNL189W CYT2Q00873 224 aa1.75□□□□□ -2.13
SRP1YNL189W ABF2Q02486 183 aa1.75□□□□□ -2.13
SRP1YNL189W ABP140Q08641 628 aaKnown RBP1.75□□□□□ -2.13
SRP1YNL189W GRE1Q08969 168 aa1.75□□□□□ -2.13
SRP1YNL189W PSF1Q12488 208 aa1.75□□□□□ -2.13
SRP1YNL189W TUS1Q06412 1307 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms