RNA–Protein interactions for RNA: YIR042C

YIR042C, Transcript of Putative protein of unknown function, yeast

Gene YIR042C, Length 711 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIR042C	YIR042C	TOR1	P35169	2470 aa		5.35	□□□□□ -1.55
YIR042C	YIR042C	SSA3	P09435	649 aa	Known RBP	5.35	□□□□□ -1.55
YIR042C	YIR042C	YLL053C	P0CD98	152 aa		5.35	□□□□□ -1.55
YIR042C	YIR042C	RFA3	P26755	122 aa	Known RBP	5.35	□□□□□ -1.55
YIR042C	YIR042C	MSK1	P32048	576 aa		5.35	□□□□□ -1.55
YIR042C	YIR042C	AFG1	P32317	509 aa		5.35	□□□□□ -1.55
YIR042C	YIR042C	PRS3	P38689	320 aa	Known RBP	5.35	□□□□□ -1.55
YIR042C	YIR042C	YND1	P40009	630 aa		5.35	□□□□□ -1.55
YIR042C	YIR042C	SPC25	P40014	221 aa		5.35	□□□□□ -1.55
YIR042C	YIR042C	SKP1	P52286	194 aa		5.35	□□□□□ -1.55
YIR042C	YIR042C	UFD1	P53044	361 aa		5.35	□□□□□ -1.55
YIR042C	YIR042C	YIF1	P53845	314 aa	Known RBP	5.35	□□□□□ -1.55
YIR042C	YIR042C	GIM3	P53900	129 aa		5.35	□□□□□ -1.55
YIR042C	YIR042C	SKO1	Q02100	647 aa		5.35	□□□□□ -1.55
YIR042C	YIR042C	YPL039W	Q03080	316 aa		5.35	□□□□□ -1.55
YIR042C	YIR042C	CGI121	Q03705	181 aa	Known RBP	5.35	□□□□□ -1.55
YIR042C	YIR042C	ERP1	Q05359	219 aa	Known RBP	5.35	□□□□□ -1.55
YIR042C	YIR042C	VAM3	Q12241	283 aa		5.35	□□□□□ -1.55
YIR042C	YIR042C	YLR146W-A	Q2V2P1	62 aa		5.35	□□□□□ -1.55
YIR042C	YIR042C	COA2	Q3E823	68 aa		5.35	□□□□□ -1.55
YIR042C	YIR042C	UBA3	Q99344	299 aa		5.35	□□□□□ -1.55
YIR042C	YIR042C	MSW1	P04803	379 aa		5.34	□□□□□ -1.55
YIR042C	YIR042C	CDC36	P06100	191 aa	Predicted RBP	5.34	□□□□□ -1.55
YIR042C	YIR042C	YML003W	P0CF16	290 aa		5.34	□□□□□ -1.55
YIR042C	YIR042C	MDH2	P22133	377 aa		5.34	□□□□□ -1.55
YIR042C	YIR042C	SED4	P25365	1065 aa		5.34	□□□□□ -1.55
YIR042C	YIR042C	OCH1	P31755	480 aa		5.34	□□□□□ -1.55
YIR042C	YIR042C	ERG2	P32352	222 aa		5.34	□□□□□ -1.55
YIR042C	YIR042C	POG1	P40473	351 aa		5.34	□□□□□ -1.55
YIR042C	YIR042C	GPP1	P41277	250 aa	Known RBP	5.34	□□□□□ -1.55
YIR042C	YIR042C	CUP9	P41817	306 aa		5.34	□□□□□ -1.55
YIR042C	YIR042C	DAN1	P47178	298 aa		5.34	□□□□□ -1.55
YIR042C	YIR042C	OCA1	P50946	238 aa	Predicted RBP	5.34	□□□□□ -1.55
YIR042C	YIR042C	MRPL22	P53881	309 aa		5.34	□□□□□ -1.55
YIR042C	YIR042C	VPS28	Q02767	242 aa		5.34	□□□□□ -1.55
YIR042C	YIR042C	YMR082C	Q04276	118 aa		5.34	□□□□□ -1.55
YIR042C	YIR042C	SNU23	Q12368	194 aa	Predicted RBP	5.34	□□□□□ -1.55
YIR042C	YIR042C	YLR365W	Q7LIF2	110 aa		5.34	□□□□□ -1.55
YIR042C	YIR042C	ECM25	P32525	599 aa		5.33	□□□□□ -1.56
YIR042C	YIR042C	GLC7	P32598	312 aa	Known RBP	5.33	□□□□□ -1.56
YIR042C	YIR042C	MNS1	P32906	549 aa		5.33	□□□□□ -1.56
YIR042C	YIR042C	SOF1	P33750	489 aa	Known RBP	5.33	□□□□□ -1.56
YIR042C	YIR042C	RPB7	P34087	171 aa		5.33	□□□□□ -1.56
YIR042C	YIR042C	ATG8	P38182	117 aa	RIP-Chip data	5.33	□□□□□ -1.56	not detected
YIR042C	YIR042C	YEA4	P40004	342 aa		5.33	□□□□□ -1.56
YIR042C	YIR042C	YJR011C	P47086	261 aa	Predicted RBP	5.33	□□□□□ -1.56
YIR042C	YIR042C	YJR056C	P47115	236 aa		5.33	□□□□□ -1.56
YIR042C	YIR042C	GPI15	P53961	229 aa		5.33	□□□□□ -1.56
YIR042C	YIR042C	SRP1	Q02821	542 aa	Known RBP	5.33	□□□□□ -1.56
YIR042C	YIR042C	HAS1	Q03532	505 aa	Known RBP	5.33	□□□□□ -1.56
YIR042C	YIR042C	MRX9	Q07349	420 aa	Known RBP	5.33	□□□□□ -1.56
YIR042C	YIR042C	DGK1	Q12382	290 aa		5.33	□□□□□ -1.56
YIR042C	YIR042C	YPR108W-A	Q3E7B3	70 aa		5.33	□□□□□ -1.56
YIR042C	YIR042C	NUM1	Q00402	2748 aa		5.33	□□□□□ -1.56
YIR042C	YIR042C	YFR010W-A	P0C5N0	62 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	NAM2	P11325	894 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	RPL30	P14120	105 aa	Known RBP	5.32	□□□□□ -1.56
YIR042C	YIR042C	ATG15	P25641	520 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	YBL010C	P32788	280 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	NTF2	P33331	125 aa	Known RBP	5.32	□□□□□ -1.56
YIR042C	YIR042C	SHM2	P37291	469 aa	Known RBP	5.32	□□□□□ -1.56
YIR042C	YIR042C	YBR013C	P38215	129 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	MTC6	P38849	526 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	FLO5	P38894	1075 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	SHO1	P40073	367 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	PGD1	P40356	397 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	NSE4	P43124	402 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	NIT2	P47016	307 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	IKS1	P47042	667 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	YJR012C	P47087	207 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	HSV2	P50079	448 aa	Predicted RBP	5.32	□□□□□ -1.56
YIR042C	YIR042C	AVT4	P50944	713 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	ADD37	Q03233	198 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	YPD1	Q07688	167 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	YOR376W	Q08900	122 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	ALG6	Q12001	544 aa	Known RBP	5.32	□□□□□ -1.56
YIR042C	YIR042C	FRE8	Q12209	686 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	WHI5	Q12416	295 aa		5.32	□□□□□ -1.56
YIR042C	YIR042C	YHR214C-D	P0CX93	97 aa		5.31	□□□□□ -1.56
YIR042C	YIR042C	CDC26	P14724	124 aa		5.31	□□□□□ -1.56
YIR042C	YIR042C	SDH4	P37298	181 aa		5.31	□□□□□ -1.56
YIR042C	YIR042C	ARC40	P38328	384 aa	Known RBP	5.31	□□□□□ -1.56
YIR042C	YIR042C	RPL13B	P40212	199 aa	Known RBP	5.31	□□□□□ -1.56
YIR042C	YIR042C	GTT1	P40582	234 aa		5.31	□□□□□ -1.56
YIR042C	YIR042C	REE1	P40893	198 aa		5.31	□□□□□ -1.56
YIR042C	YIR042C	BNS1	P50084	137 aa		5.31	□□□□□ -1.56
YIR042C	YIR042C	TEX1	P53851	422 aa	Known RBP	5.31	□□□□□ -1.56
YIR042C	YIR042C	TMA23	Q03525	211 aa		5.31	□□□□□ -1.56
YIR042C	YIR042C	TDA6	Q06466	467 aa		5.31	□□□□□ -1.56
YIR042C	YIR042C	YOL118C	Q08259	102 aa		5.31	□□□□□ -1.56
YIR042C	YIR042C	NCE102	Q12207	173 aa	RIP-Chip data	5.31	□□□□□ -1.56	not detected
YIR042C	YIR042C	MPD1	Q12404	318 aa	Known RBP	5.31	□□□□□ -1.56
YIR042C	YIR042C	AIM45	Q12480	344 aa	Known RBP	5.31	□□□□□ -1.56
YIR042C	YIR042C	RPL13A	Q12690	199 aa	Predicted RBP	5.31	□□□□□ -1.56
YIR042C	YIR042C	YBR255C-A	Q3E776	120 aa		5.31	□□□□□ -1.56
YIR042C	YIR042C	TEL1	P38110	2787 aa		5.3	□□□□□ -1.56
YIR042C	YIR042C	RPS16A	P0CX51	143 aa	Known RBP	5.3	□□□□□ -1.56
YIR042C	YIR042C	RPS16B	P0CX52	143 aa	Known RBP	5.3	□□□□□ -1.56
YIR042C	YIR042C	REC114	P32841	428 aa		5.3	□□□□□ -1.56
YIR042C	YIR042C	SWD3	P38123	315 aa		5.3	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms