RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C FCY2P17064 533 aa-1.67□□□□□ -2.68
SPG3YDR504C PET18P25362 215 aa-1.67□□□□□ -2.68
SPG3YDR504C CSM1P25651 190 aa-1.67□□□□□ -2.68
SPG3YDR504C HSM3P38348 480 aa-1.67□□□□□ -2.68
SPG3YDR504C DSN1P40568 576 aa-1.67□□□□□ -2.68
SPG3YDR504C SAR1P20606 190 aaKnown RBP-1.68□□□□□ -2.68
SPG3YDR504C VMA22P38784 181 aa-1.68□□□□□ -2.68
SPG3YDR504C FSF1Q12029 327 aaKnown RBP-1.68□□□□□ -2.68
SPG3YDR504C ATG40Q99325 256 aa-1.68□□□□□ -2.68
SPG3YDR504C YLR236CA0A023PZG4 107 aa-1.69□□□□□ -2.68
SPG3YDR504C IPP1P00817 287 aaKnown RBP-1.69□□□□□ -2.68
SPG3YDR504C UBC8P28263 218 aa-1.69□□□□□ -2.68
SPG3YDR504C RPC25P35718 212 aa-1.69□□□□□ -2.68
SPG3YDR504C YBR063CP38083 404 aa-1.69□□□□□ -2.68
SPG3YDR504C VOA1P53262 265 aa-1.69□□□□□ -2.68
SPG3YDR504C YKL070WP36087 169 aa-1.7□□□□□ -2.68
SPG3YDR504C YAR064WP39563 99 aa-1.7□□□□□ -2.68
SPG3YDR504C SNZ3P43545 298 aa-1.7□□□□□ -2.68
SPG3YDR504C YKR104WP0CE69 306 aa-1.71□□□□□ -2.68
SPG3YDR504C MRPL40P36534 297 aa-1.71□□□□□ -2.68
SPG3YDR504C NAS2P40555 220 aa-1.71□□□□□ -2.68
SPG3YDR504C GCN20P43535 752 aaKnown RBP-1.71□□□□□ -2.68
SPG3YDR504C ATG17Q06410 417 aa-1.71□□□□□ -2.68
SPG3YDR504C VAC14Q06708 880 aa-1.71□□□□□ -2.68
SPG3YDR504C RAD28Q12021 506 aa-1.71□□□□□ -2.68
SPG3YDR504C TUS1Q06412 1307 aa-1.71□□□□□ -2.68
SPG3YDR504C DBF2P22204 572 aa-1.72□□□□□ -2.68
SPG3YDR504C SWE1P32944 819 aa-1.72□□□□□ -2.68
SPG3YDR504C SNC2P33328 115 aa-1.72□□□□□ -2.68
SPG3YDR504C HAM1P47119 197 aaKnown RBP-1.72□□□□□ -2.68
SPG3YDR504C RRG8Q06109 277 aa-1.72□□□□□ -2.68
SPG3YDR504C ODC2Q99297 307 aa-1.72□□□□□ -2.68
SPG3YDR504C FRS2P15625 503 aaKnown RBP-1.73□□□□□ -2.69
SPG3YDR504C SHE2P36068 246 aaKnown RBP RIP-Chip data-1.73□□□□□ -2.69not detected
SPG3YDR504C SSO2P39926 295 aa-1.73□□□□□ -2.69
SPG3YDR504C HPA3P39979 161 aa-1.73□□□□□ -2.69
SPG3YDR504C YFL051CP43552 160 aa-1.73□□□□□ -2.69
SPG3YDR504C CUE4Q04201 117 aaPredicted RBP-1.73□□□□□ -2.69
SPG3YDR504C REP2P03872 296 aa-1.74□□□□□ -2.69
SPG3YDR504C KRR1P25586 316 aaPredicted RBP-1.74□□□□□ -2.69
SPG3YDR504C BLI1P35727 113 aa-1.74□□□□□ -2.69
SPG3YDR504C LSB1P53281 241 aa-1.74□□□□□ -2.69
SPG3YDR504C RRP40Q08285 240 aaKnown RBP-1.74□□□□□ -2.69
SPG3YDR504C YRA1Q12159 226 aaKnown RBP-1.74□□□□□ -2.69
SPG3YDR504C DAL82P21705 255 aa-1.75□□□□□ -2.69
SPG3YDR504C AHT1P29589 182 aa-1.75□□□□□ -2.69
SPG3YDR504C RPT5P33297 434 aaKnown RBP-1.75□□□□□ -2.69
SPG3YDR504C BCP1Q06338 283 aa-1.75□□□□□ -2.69
SPG3YDR504C BLM10P43583 2143 aa-1.76□□□□□ -2.69
SPG3YDR504C MRPL39P36533 70 aa-1.76□□□□□ -2.69
SPG3YDR504C YBR242WP38331 238 aa-1.76□□□□□ -2.69
SPG3YDR504C YNL046WP53956 172 aa-1.76□□□□□ -2.69
SPG3YDR504C BNA7Q04066 261 aa-1.76□□□□□ -2.69
SPG3YDR504C CUR1Q06469 252 aa-1.76□□□□□ -2.69
SPG3YDR504C ERP4Q12450 207 aa-1.76□□□□□ -2.69
SPG3YDR504C VPS3P23643 1011 aa-1.77□□□□□ -2.69
SPG3YDR504C YER034WP40022 185 aaKnown RBP-1.77□□□□□ -2.69
SPG3YDR504C PRE6P40303 254 aaKnown RBP-1.77□□□□□ -2.69
SPG3YDR504C YNL010WP53981 241 aaKnown RBP-1.77□□□□□ -2.69
SPG3YDR504C GPM2Q12008 311 aa-1.77□□□□□ -2.69
SPG3YDR504C YLR307C-AQ3E825 87 aa-1.77□□□□□ -2.69
SPG3YDR504C YHR213W-BQ8TGK1 99 aa-1.77□□□□□ -2.69
SPG3YDR504C YSR3P23501 404 aa-1.78□□□□□ -2.69
SPG3YDR504C HHY1P39982 102 aa-1.78□□□□□ -2.69
SPG3YDR504C DCV1P43595 202 aa-1.78□□□□□ -2.69
SPG3YDR504C YJR012CP47087 207 aa-1.78□□□□□ -2.69
SPG3YDR504C SPG4Q04438 115 aa-1.78□□□□□ -2.69
SPG3YDR504C ADH6Q04894 360 aaKnown RBP-1.78□□□□□ -2.69
SPG3YDR504C SSQ1Q05931 657 aaPredicted RBP-1.78□□□□□ -2.69
SPG3YDR504C MRPL17P36528 281 aa-1.79□□□□□ -2.7
SPG3YDR504C EAF6P47128 113 aa-1.79□□□□□ -2.7
SPG3YDR504C QRI5P32344 111 aa-1.8□□□□□ -2.7
SPG3YDR504C DOG2P38773 246 aa-1.8□□□□□ -2.7
SPG3YDR504C CAT5P41735 233 aa-1.8□□□□□ -2.7
SPG3YDR504C SNZ2P53824 298 aa-1.8□□□□□ -2.7
SPG3YDR504C ABF2Q02486 183 aa-1.8□□□□□ -2.7
SPG3YDR504C DAL80P26343 269 aa-1.81□□□□□ -2.7
SPG3YDR504C RPS5P26783 225 aaKnown RBP-1.81□□□□□ -2.7
SPG3YDR504C RPB7P34087 171 aa-1.81□□□□□ -2.7
SPG3YDR504C YDR248CQ03786 193 aa-1.81□□□□□ -2.7
SPG3YDR504C SEN2P16658 377 aa-1.82□□□□□ -2.7
SPG3YDR504C ERD2P18414 219 aa-1.82□□□□□ -2.7
SPG3YDR504C PTC1P35182 281 aa-1.82□□□□□ -2.7
SPG3YDR504C GOS1P38736 223 aa-1.82□□□□□ -2.7
SPG3YDR504C YML096WQ04489 525 aa-1.82□□□□□ -2.7
SPG3YDR504C YPL073CP40323 161 aa-1.83□□□□□ -2.7
SPG3YDR504C ILM1P47155 203 aa-1.83□□□□□ -2.7
SPG3YDR504C YNL260CP53846 198 aa-1.83□□□□□ -2.7
SPG3YDR504C SWP1Q02795 286 aa-1.83□□□□□ -2.7
SPG3YDR504C YPR174CQ06616 221 aaPredicted RBP-1.83□□□□□ -2.7
SPG3YDR504C YPR170W-BP0C5R9 85 aa-1.84□□□□□ -2.7
SPG3YDR504C URA8P38627 578 aaPredicted RBP-1.84□□□□□ -2.7
SPG3YDR504C DDI1P40087 428 aa-1.84□□□□□ -2.7
SPG3YDR504C TMA23Q03525 211 aa-1.84□□□□□ -2.7
SPG3YDR504C TSC3Q3E790 80 aa-1.84□□□□□ -2.7
SPG3YDR504C YLR157W-EP0CF00 54 aa-1.85□□□□□ -2.71
SPG3YDR504C DDR48P18899 430 aaKnown RBP-1.85□□□□□ -2.71
SPG3YDR504C GVP36P40531 326 aaKnown RBP-1.85□□□□□ -2.71
SPG3YDR504C RPS29BP41058 56 aaKnown RBP-1.85□□□□□ -2.71
SPG3YDR504C LOC1P43586 204 aaPredicted RBP-1.85□□□□□ -2.71
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms