RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 FIS1P40515 155 aa-0.56□□□□□ -2.5
snR55snR55 YAE1P47118 141 aaPredicted RBP-0.56□□□□□ -2.5
snR55snR55 DIG2Q03373 323 aaKnown RBP-0.56□□□□□ -2.5
snR55snR55 ATG39Q06159 398 aa-0.56□□□□□ -2.5
snR55snR55 YPT52P36018 234 aaKnown RBP-0.57□□□□□ -2.5
snR55snR55 MRX3P38172 270 aa-0.57□□□□□ -2.5
snR55snR55 SSO2P39926 295 aa-0.57□□□□□ -2.5
snR55snR55 CUS2P53830 285 aaPredicted RBP-0.57□□□□□ -2.5
snR55snR55 ABZ2Q03266 374 aa-0.57□□□□□ -2.5
snR55snR55 YDR124WQ04608 324 aa-0.57□□□□□ -2.5
snR55snR55 RRG8Q06109 277 aa-0.57□□□□□ -2.5
snR55snR55 VAC14Q06708 880 aa-0.57□□□□□ -2.5
snR55snR55 YDL180WQ12301 547 aa-0.57□□□□□ -2.5
snR55snR55 PDR18P53756 1333 aa-0.58□□□□□ -2.5
snR55snR55 RPC25P35718 212 aa-0.58□□□□□ -2.5
snR55snR55 MRH4P53166 561 aa-0.58□□□□□ -2.5
snR55snR55 VOA1P53262 265 aa-0.58□□□□□ -2.5
snR55snR55 POP3P53833 195 aaPredicted RBP-0.58□□□□□ -2.5
snR55snR55 SPG3Q04398 127 aaPredicted RBP-0.58□□□□□ -2.5
snR55snR55 YCT1Q12235 531 aa-0.58□□□□□ -2.5
snR55snR55 MET5P47169 1442 aa-0.58□□□□□ -2.5
snR55snR55 FRS2P15625 503 aaKnown RBP-0.59□□□□□ -2.5
snR55snR55 RRF1P38771 230 aa-0.59□□□□□ -2.5
snR55snR55 VPS45P38932 577 aa-0.59□□□□□ -2.5
snR55snR55 YEA4P40004 342 aa-0.59□□□□□ -2.5
snR55snR55 RPA43P46669 326 aa-0.59□□□□□ -2.5
snR55snR55 GPI8P49018 411 aa-0.59□□□□□ -2.5
snR55snR55 AIF1P52923 378 aa-0.59□□□□□ -2.5
snR55snR55 YPR172WQ06608 200 aa-0.59□□□□□ -2.5
snR55snR55 SME1Q12330 94 aaPredicted RBP-0.59□□□□□ -2.5
snR55snR55 YHR139C-AO13536 103 aa-0.6□□□□□ -2.51
snR55snR55 SAR1P20606 190 aaKnown RBP-0.6□□□□□ -2.51
snR55snR55 CSM1P25651 190 aa-0.6□□□□□ -2.51
snR55snR55 EHD3P28817 500 aa-0.6□□□□□ -2.51
snR55snR55 EDC3P39998 551 aaKnown RBP-0.6□□□□□ -2.51
snR55snR55 PGD1P40356 397 aa-0.6□□□□□ -2.51
snR55snR55 FLX1P40464 311 aa-0.6□□□□□ -2.51
snR55snR55 ERJ5P43613 295 aaPredicted RBP-0.6□□□□□ -2.51
snR55snR55 YJR056CP47115 236 aa-0.6□□□□□ -2.51
snR55snR55 RMR1P53060 241 aa-0.6□□□□□ -2.51
snR55snR55 ARO8P53090 500 aaKnown RBP-0.6□□□□□ -2.51
snR55snR55 SAY1P53324 424 aa-0.6□□□□□ -2.51
snR55snR55 YNR077CP53758 84 aa-0.6□□□□□ -2.51
snR55snR55 SYC1Q08553 188 aaPredicted RBP-0.6□□□□□ -2.51
snR55snR55 JEN1P36035 616 aa-0.61□□□□□ -2.51
snR55snR55 HSM3P38348 480 aa-0.61□□□□□ -2.51
snR55snR55 YHL042WP38729 150 aa-0.61□□□□□ -2.51
snR55snR55 LSB1P53281 241 aa-0.61□□□□□ -2.51
snR55snR55 GOT1Q03554 138 aa-0.61□□□□□ -2.51
snR55snR55 YPL257WQ08974 193 aa-0.61□□□□□ -2.51
snR55snR55 ECM33P38248 429 aaKnown RBP-0.62□□□□□ -2.51
snR55snR55 SIP3P38717 1229 aa-0.62□□□□□ -2.51
snR55snR55 DSN1P40568 576 aa-0.62□□□□□ -2.51
snR55snR55 DOC1P53068 250 aa-0.62□□□□□ -2.51
snR55snR55 NOP13P53883 403 aaKnown RBP RIP-Chip data-0.62□□□□□ -2.51not detected
snR55snR55 CUR1Q06469 252 aa-0.62□□□□□ -2.51
snR55snR55 CDC8P00572 216 aa-0.63□□□□□ -2.51
snR55snR55 TFC1P32367 649 aa-0.63□□□□□ -2.51
snR55snR55 YNL247WP53852 767 aaKnown RBP-0.63□□□□□ -2.51
snR55snR55 CWC27Q02770 301 aa-0.63□□□□□ -2.51
snR55snR55 NIP7Q08962 181 aaKnown RBP-0.63□□□□□ -2.51
snR55snR55 STP22P25604 385 aa-0.64□□□□□ -2.51
snR55snR55 RPF1P38805 295 aaKnown RBP-0.64□□□□□ -2.51
snR55snR55 YAR068WP39564 161 aa-0.64□□□□□ -2.51
snR55snR55 THO1P40040 218 aaKnown RBP-0.64□□□□□ -2.51
snR55snR55 LOC1P43586 204 aaPredicted RBP-0.64□□□□□ -2.51
snR55snR55 KNH1P50112 268 aa-0.64□□□□□ -2.51
snR55snR55 RCE1Q03530 315 aa-0.64□□□□□ -2.51
snR55snR55 TRM12Q04235 462 aa-0.64□□□□□ -2.51
snR55snR55 YPR147CQ06522 304 aaKnown RBP-0.64□□□□□ -2.51
snR55snR55 SNF8Q12483 233 aa-0.64□□□□□ -2.51
snR55snR55 PEX17P40155 199 aa-0.65□□□□□ -2.51
snR55snR55 SNZ3P43545 298 aa-0.65□□□□□ -2.51
snR55snR55 GAS3Q03655 524 aa-0.65□□□□□ -2.51
snR55snR55 YOR186WQ08560 144 aa-0.65□□□□□ -2.51
snR55snR55 ERP4Q12450 207 aa-0.65□□□□□ -2.51
snR55snR55 YKR104WP0CE69 306 aa-0.66□□□□□ -2.52
snR55snR55 PRO2P54885 456 aaKnown RBP-0.66□□□□□ -2.52
snR55snR55 RCF1Q03713 159 aa-0.66□□□□□ -2.52
snR55snR55 BCP1Q06338 283 aa-0.66□□□□□ -2.52
snR55snR55 COQ10Q08058 207 aa-0.66□□□□□ -2.52
snR55snR55 FMP49A0A023PZB3 126 aa-0.67□□□□□ -2.52
snR55snR55 YSR3P23501 404 aa-0.67□□□□□ -2.52
snR55snR55 RRP40Q08285 240 aaKnown RBP-0.67□□□□□ -2.52
snR55snR55 HTL1Q9URQ5 78 aa-0.67□□□□□ -2.52
snR55snR55 YKL070WP36087 169 aa-0.68□□□□□ -2.52
snR55snR55 MEP1P40260 492 aa-0.68□□□□□ -2.52
snR55snR55 RSM25P40496 264 aa-0.68□□□□□ -2.52
snR55snR55 YNL260CP53846 198 aa-0.68□□□□□ -2.52
snR55snR55 YMR252CQ04814 134 aa-0.68□□□□□ -2.52
snR55snR55 ATG17Q06410 417 aa-0.68□□□□□ -2.52
snR55snR55 PSF1Q12488 208 aa-0.68□□□□□ -2.52
snR55snR55 FCY2P17064 533 aa-0.69□□□□□ -2.52
snR55snR55 YCL042WP25572 119 aa-0.69□□□□□ -2.52
snR55snR55 QRI5P32344 111 aa-0.69□□□□□ -2.52
snR55snR55 YET1P35723 206 aa-0.69□□□□□ -2.52
snR55snR55 BLI1P35727 113 aa-0.69□□□□□ -2.52
snR55snR55 OPY1P38271 328 aa-0.69□□□□□ -2.52
snR55snR55 YNL046WP53956 172 aa-0.69□□□□□ -2.52
snR55snR55 YOR020W-AQ3E824 90 aa-0.69□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 2267.9 ms