RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C MRPS8Q03799 155 aa2.16□□□□□ -2.06
RPN8YOR261C RRT8Q08219 342 aa2.16□□□□□ -2.06
RPN8YOR261C ATO3Q12359 275 aa2.16□□□□□ -2.06
RPN8YOR261C YKL075CP36083 450 aa2.15□□□□□ -2.07
RPN8YOR261C RMR1P53060 241 aa2.15□□□□□ -2.07
RPN8YOR261C YPL257WQ08974 193 aa2.15□□□□□ -2.07
RPN8YOR261C SNU23Q12368 194 aaPredicted RBP2.15□□□□□ -2.07
RPN8YOR261C DSF1P0CX08 502 aa2.14□□□□□ -2.07
RPN8YOR261C YNR073CP0CX09 502 aa2.14□□□□□ -2.07
RPN8YOR261C FBA1P14540 359 aaKnown RBP2.14□□□□□ -2.07
RPN8YOR261C ERD2P18414 219 aa2.14□□□□□ -2.07
RPN8YOR261C RPS5P26783 225 aaKnown RBP2.14□□□□□ -2.07
RPN8YOR261C PEX4P29340 183 aa2.14□□□□□ -2.07
RPN8YOR261C YHR127WP38833 243 aaKnown RBP2.14□□□□□ -2.07
RPN8YOR261C JHD2P47156 728 aaPredicted RBP2.14□□□□□ -2.07
RPN8YOR261C YPL229WQ99395 206 aa2.14□□□□□ -2.07
RPN8YOR261C SIR4P11978 1358 aa2.13□□□□□ -2.07
RPN8YOR261C CDC7P06243 507 aa2.13□□□□□ -2.07
RPN8YOR261C MDH3P32419 343 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
RPN8YOR261C VMA11P32842 164 aa2.13□□□□□ -2.07
RPN8YOR261C YJR079WP47126 109 aa2.13□□□□□ -2.07
RPN8YOR261C RHO3Q00245 231 aaKnown RBP2.13□□□□□ -2.07
RPN8YOR261C SEI1Q06058 285 aa2.13□□□□□ -2.07
RPN8YOR261C IPP1P00817 287 aaKnown RBP2.12□□□□□ -2.07
RPN8YOR261C YUH1P35127 236 aa2.12□□□□□ -2.07
RPN8YOR261C YPT52P36018 234 aaKnown RBP2.12□□□□□ -2.07
RPN8YOR261C PEP8P40335 379 aa2.12□□□□□ -2.07
RPN8YOR261C FIS1P40515 155 aa2.12□□□□□ -2.07
RPN8YOR261C HOC1P47124 396 aa2.12□□□□□ -2.07
RPN8YOR261C YGR219WP53307 113 aa2.12□□□□□ -2.07
RPN8YOR261C MSA1Q08471 629 aa2.12□□□□□ -2.07
RPN8YOR261C ATG31Q12421 196 aa2.12□□□□□ -2.07
RPN8YOR261C TCP1P12612 559 aaKnown RBP2.11□□□□□ -2.07
RPN8YOR261C SNA3P14359 133 aa2.11□□□□□ -2.07
RPN8YOR261C PHO88P38264 188 aaPredicted RBP2.11□□□□□ -2.07
RPN8YOR261C RPA43P46669 326 aa2.11□□□□□ -2.07
RPN8YOR261C ARR2Q06597 130 aa2.11□□□□□ -2.07
RPN8YOR261C HTL1Q9URQ5 78 aa2.11□□□□□ -2.07
RPN8YOR261C GRX2P17695 143 aaKnown RBP2.1□□□□□ -2.07
RPN8YOR261C RPF1P38805 295 aaKnown RBP2.1□□□□□ -2.07
RPN8YOR261C BNA6P43619 295 aa2.1□□□□□ -2.07
RPN8YOR261C YNL134CP53912 376 aaKnown RBP2.1□□□□□ -2.07
RPN8YOR261C ATG39Q06159 398 aa2.1□□□□□ -2.07
RPN8YOR261C YLR173WQ06247 608 aa2.1□□□□□ -2.07
RPN8YOR261C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
RPN8YOR261C NIP7Q08962 181 aaKnown RBP2.1□□□□□ -2.07
RPN8YOR261C RPL9AP05738 191 aaKnown RBP2.09□□□□□ -2.07
RPN8YOR261C OAC1P32332 324 aa2.09□□□□□ -2.07
RPN8YOR261C CIS3P47001 227 aa2.09□□□□□ -2.07
RPN8YOR261C RPL9BP51401 191 aaKnown RBP2.09□□□□□ -2.07
RPN8YOR261C CYT2Q00873 224 aa2.09□□□□□ -2.07
RPN8YOR261C NEJ1Q06148 342 aa2.09□□□□□ -2.07
RPN8YOR261C PAM18Q07914 168 aa2.09□□□□□ -2.07
RPN8YOR261C YHR139C-AO13536 103 aa2.08□□□□□ -2.08
RPN8YOR261C ERV15P38312 142 aa2.08□□□□□ -2.08
RPN8YOR261C YHR022CP38763 256 aa2.08□□□□□ -2.08
RPN8YOR261C YHR180WP38868 163 aa2.08□□□□□ -2.08
RPN8YOR261C BMT5P40493 336 aa2.08□□□□□ -2.08
RPN8YOR261C YJR056CP47115 236 aa2.08□□□□□ -2.08
RPN8YOR261C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
RPN8YOR261C HEM25Q07534 307 aa2.08□□□□□ -2.08
RPN8YOR261C YLR126CQ12288 251 aa2.08□□□□□ -2.08
RPN8YOR261C MSW1P04803 379 aa2.07□□□□□ -2.08
RPN8YOR261C DDI2P0CH63 225 aa2.07□□□□□ -2.08
RPN8YOR261C DDI3P0CH64 225 aa2.07□□□□□ -2.08
RPN8YOR261C ECM33P38248 429 aaKnown RBP2.07□□□□□ -2.08
RPN8YOR261C YKE4P40544 346 aa2.07□□□□□ -2.08
RPN8YOR261C CAT5P41735 233 aa2.07□□□□□ -2.08
RPN8YOR261C HAM1P47119 197 aaKnown RBP2.07□□□□□ -2.08
RPN8YOR261C ERG25P53045 309 aa2.07□□□□□ -2.08
RPN8YOR261C KRE28Q04431 385 aa2.07□□□□□ -2.08
RPN8YOR261C INO80P53115 1489 aa2.07□□□□□ -2.08
RPN8YOR261C YER135CP40082 130 aa2.06□□□□□ -2.08
RPN8YOR261C YOR020W-AQ3E824 90 aa2.06□□□□□ -2.08
RPN8YOR261C MDH2P22133 377 aa2.05□□□□□ -2.08
RPN8YOR261C DSE2P38844 325 aa2.05□□□□□ -2.08
RPN8YOR261C YMR144WP40214 342 aaKnown RBP2.05□□□□□ -2.08
RPN8YOR261C MRPL50P53724 139 aa2.05□□□□□ -2.08
RPN8YOR261C SRL4Q03085 281 aa2.05□□□□□ -2.08
RPN8YOR261C USB1Q12208 290 aaKnown RBP2.05□□□□□ -2.08
RPN8YOR261C DCN1Q12395 269 aa2.05□□□□□ -2.08
RPN8YOR261C FCY2P17064 533 aa2.04□□□□□ -2.08
RPN8YOR261C RPO26P20435 155 aa2.04□□□□□ -2.08
RPN8YOR261C YAR068WP39564 161 aa2.04□□□□□ -2.08
RPN8YOR261C ILM1P47155 203 aa2.04□□□□□ -2.08
RPN8YOR261C YJR149WP47177 404 aa2.04□□□□□ -2.08
RPN8YOR261C YNR062CP53748 327 aa2.04□□□□□ -2.08
RPN8YOR261C TPO4Q12256 659 aa2.04□□□□□ -2.08
RPN8YOR261C YBR063CP38083 404 aa2.03□□□□□ -2.08
RPN8YOR261C YIL001WP40560 513 aa2.03□□□□□ -2.08
RPN8YOR261C PRM10P42946 383 aa2.03□□□□□ -2.08
RPN8YOR261C MED4Q12343 284 aa2.03□□□□□ -2.08
RPN8YOR261C RIB1P38066 345 aa2.02□□□□□ -2.09
RPN8YOR261C FMC1P40491 155 aa2.02□□□□□ -2.09
RPN8YOR261C RSM25P40496 264 aa2.02□□□□□ -2.09
RPN8YOR261C SVP26P38869 228 aa2.01□□□□□ -2.09
RPN8YOR261C MCM22P47167 239 aa2.01□□□□□ -2.09
RPN8YOR261C TOS8P53147 276 aa2.01□□□□□ -2.09
RPN8YOR261C ABF2Q02486 183 aa2.01□□□□□ -2.09
RPN8YOR261C YML096WQ04489 525 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 131.9 ms