RNA–Protein interactions for RNA: YML015C

TAF11, Transcript of TFIID subunit (40 kDa), yeast

Gene TAF11, Length 1,041 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TAF11	YML015C	KRE6	P32486	720 aa		4.26	□□□□□ -1.73
TAF11	YML015C	CAT2	P32796	670 aa	Known RBP	4.26	□□□□□ -1.73
TAF11	YML015C	POP8	P38208	133 aa		4.26	□□□□□ -1.73
TAF11	YML015C	AVT6	P40074	448 aa		4.26	□□□□□ -1.73
TAF11	YML015C	HYR1	P40581	163 aa	Known RBP	4.26	□□□□□ -1.73
TAF11	YML015C	FLC3	P53121	802 aa		4.26	□□□□□ -1.73
TAF11	YML015C	MRPL50	P53724	139 aa		4.26	□□□□□ -1.73
TAF11	YML015C	SMD1	Q02260	146 aa	Predicted RBP	4.26	□□□□□ -1.73
TAF11	YML015C	ECM11	Q04110	302 aa		4.26	□□□□□ -1.73
TAF11	YML015C	YKL068W-A	Q3E826	78 aa		4.26	□□□□□ -1.73
TAF11	YML015C	MEC1	P38111	2368 aa		4.26	□□□□□ -1.73
TAF11	YML015C	CKA2	P19454	339 aa		4.25	□□□□□ -1.73
TAF11	YML015C	VPS3	P23643	1011 aa		4.25	□□□□□ -1.73
TAF11	YML015C	RNA15	P25299	296 aa	Predicted RBP	4.25	□□□□□ -1.73
TAF11	YML015C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	RIP-Chip
TAF11	YML015C	SIP3	P38717	1229 aa		4.25	□□□□□ -1.73
TAF11	YML015C	SMB1	P40018	196 aa	Known RBP	4.25	□□□□□ -1.73
TAF11	YML015C	YER085C	P40058	173 aa		4.25	□□□□□ -1.73
TAF11	YML015C	GLG2	P47011	380 aa		4.25	□□□□□ -1.73
TAF11	YML015C	YPL119C-A	Q3E751	87 aa		4.25	□□□□□ -1.73
TAF11	YML015C	CPT1	P17898	393 aa		4.24	□□□□□ -1.73
TAF11	YML015C	UFD1	P53044	361 aa		4.24	□□□□□ -1.73
TAF11	YML015C	YNL095C	P53932	642 aa		4.24	□□□□□ -1.73
TAF11	YML015C	CDD1	Q06549	142 aa		4.24	□□□□□ -1.73
TAF11	YML015C	YPL225W	Q08971	146 aa	Known RBP	4.24	□□□□□ -1.73
TAF11	YML015C	MATALPHA2	P0CY08	210 aa		4.23	□□□□□ -1.73
TAF11	YML015C	HMLALPHA2	P0CY09	210 aa		4.23	□□□□□ -1.73
TAF11	YML015C	FPR1	P20081	114 aa	Known RBP	4.23	□□□□□ -1.73
TAF11	YML015C	LDB7	P38210	180 aa		4.23	□□□□□ -1.73
TAF11	YML015C	PHO89	P38361	574 aa		4.23	□□□□□ -1.73
TAF11	YML015C	SYS1	P41544	203 aa		4.23	□□□□□ -1.73
TAF11	YML015C	HSH155	P49955	971 aa	Known RBP	4.23	□□□□□ -1.73
TAF11	YML015C	SWT21	P53873	357 aa	Predicted RBP	4.23	□□□□□ -1.73
TAF11	YML015C	YLR283W	Q05867	314 aa		4.23	□□□□□ -1.73
TAF11	YML015C	BRR2	P32639	2163 aa	Known RBP	4.23	□□□□□ -1.73
TAF11	YML015C	TDH2	P00358	332 aa	Known RBP	4.22	□□□□□ -1.73
TAF11	YML015C	MATALPHA1	P0CY06	175 aa		4.22	□□□□□ -1.73
TAF11	YML015C	HMLALPHA1	P0CY07	175 aa		4.22	□□□□□ -1.73
TAF11	YML015C	SEC14	P24280	304 aa	Known RBP	4.22	□□□□□ -1.73
TAF11	YML015C	SRB4	P32569	687 aa		4.22	□□□□□ -1.73
TAF11	YML015C	YBL081W	P38180	368 aa	Known RBP	4.22	□□□□□ -1.73
TAF11	YML015C	YHL049C	P38722	271 aa		4.22	□□□□□ -1.73
TAF11	YML015C	TRR2	P38816	342 aa		4.22	□□□□□ -1.73
TAF11	YML015C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
TAF11	YML015C	ASI3	P53983	676 aa		4.22	□□□□□ -1.73
TAF11	YML015C	CSM4	Q08955	156 aa		4.22	□□□□□ -1.73
TAF11	YML015C	SNF8	Q12483	233 aa		4.22	□□□□□ -1.73
TAF11	YML015C	POL2	P21951	2222 aa	Known RBP	4.22	□□□□□ -1.73
TAF11	YML015C	CUP2	P15315	225 aa		4.21	□□□□□ -1.74
TAF11	YML015C	PRE7	P23724	241 aa	Known RBP	4.21	□□□□□ -1.74
TAF11	YML015C	HOM6	P31116	359 aa	Known RBP	4.21	□□□□□ -1.74
TAF11	YML015C	ERG2	P32352	222 aa		4.21	□□□□□ -1.74
TAF11	YML015C	YHL044W	P38727	235 aa		4.21	□□□□□ -1.74
TAF11	YML015C	ERG10	P41338	398 aa	Known RBP	4.21	□□□□□ -1.74
TAF11	YML015C	JHD2	P47156	728 aa	Predicted RBP	4.21	□□□□□ -1.74
TAF11	YML015C	USE1	P53146	245 aa		4.21	□□□□□ -1.74
TAF11	YML015C	OSH6	Q02201	448 aa		4.21	□□□□□ -1.74
TAF11	YML015C	KRE28	Q04431	385 aa		4.21	□□□□□ -1.74
TAF11	YML015C	PEX10	Q05568	337 aa		4.21	□□□□□ -1.74
TAF11	YML015C	NNT1	Q05874	261 aa		4.21	□□□□□ -1.74
TAF11	YML015C	RPS5	P26783	225 aa	Known RBP	4.2	□□□□□ -1.74
TAF11	YML015C	EHD3	P28817	500 aa		4.2	□□□□□ -1.74
TAF11	YML015C	TKL2	P33315	681 aa		4.2	□□□□□ -1.74
TAF11	YML015C	JEN1	P36035	616 aa		4.2	□□□□□ -1.74
TAF11	YML015C	SRX1	P36077	127 aa		4.2	□□□□□ -1.74
TAF11	YML015C	HOC1	P47124	396 aa		4.2	□□□□□ -1.74
TAF11	YML015C	HST4	P53688	370 aa		4.2	□□□□□ -1.74
TAF11	YML015C	CTF19	Q02732	369 aa		4.2	□□□□□ -1.74
TAF11	YML015C	PLB3	Q08108	686 aa		4.2	□□□□□ -1.74
TAF11	YML015C	GPM2	Q12008	311 aa		4.2	□□□□□ -1.74
TAF11	YML015C	SGT2	Q12118	346 aa	Known RBP	4.2	□□□□□ -1.74
TAF11	YML015C	MRPS28	P21771	286 aa		4.19	□□□□□ -1.74
TAF11	YML015C	RPE1	P46969	238 aa		4.19	□□□□□ -1.74
TAF11	YML015C	YPL264C	Q08980	353 aa		4.19	□□□□□ -1.74
TAF11	YML015C	ATG5	Q12380	294 aa		4.19	□□□□□ -1.74
TAF11	YML015C	HFA1	P32874	2273 aa		4.19	□□□□□ -1.74
TAF11	YML015C	PRX1	P34227	261 aa	Known RBP	4.18	□□□□□ -1.74
TAF11	YML015C	YBR096W	P38256	230 aa		4.18	□□□□□ -1.74
TAF11	YML015C	ARN2	P38724	620 aa		4.18	□□□□□ -1.74
TAF11	YML015C	GCN20	P43535	752 aa	Known RBP	4.18	□□□□□ -1.74
TAF11	YML015C	DXO1	Q06349	442 aa		4.18	□□□□□ -1.74
TAF11	YML015C	NUF2	P33895	451 aa		4.17	□□□□□ -1.74
TAF11	YML015C	KDX1	P36005	433 aa		4.17	□□□□□ -1.74
TAF11	YML015C	YHI9	P38765	294 aa		4.17	□□□□□ -1.74
TAF11	YML015C	AVT2	P39981	480 aa		4.17	□□□□□ -1.74
TAF11	YML015C	OTU1	P43558	301 aa		4.17	□□□□□ -1.74
TAF11	YML015C	SLX9	P53251	210 aa	Predicted RBP	4.17	□□□□□ -1.74
TAF11	YML015C	YPR098C	Q06089	161 aa		4.17	□□□□□ -1.74
TAF11	YML015C	ATG17	Q06410	417 aa		4.17	□□□□□ -1.74
TAF11	YML015C	RFM1	Q12192	310 aa		4.17	□□□□□ -1.74
TAF11	YML015C	YCT1	Q12235	531 aa		4.17	□□□□□ -1.74
TAF11	YML015C	ARG80	P07249	177 aa		4.16	□□□□□ -1.74
TAF11	YML015C	COS2	P0CX12	379 aa		4.16	□□□□□ -1.74
TAF11	YML015C	COS3	P0CX13	379 aa		4.16	□□□□□ -1.74
TAF11	YML015C	RPO26	P20435	155 aa		4.16	□□□□□ -1.74
TAF11	YML015C	NTG1	P31378	399 aa		4.16	□□□□□ -1.74
TAF11	YML015C	MSS2	P40990	351 aa		4.16	□□□□□ -1.74
TAF11	YML015C	COS4	P43542	379 aa		4.16	□□□□□ -1.74
TAF11	YML015C	YJR079W	P47126	109 aa		4.16	□□□□□ -1.74
TAF11	YML015C	ZRG17	P53735	605 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms