RNA–Protein interactions for RNA: YNL082W

PMS1, Transcript of ATP-binding protein required for mismatch repair, yeast

Gene PMS1, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMS1	YNL082W	TAF9	Q05027	157 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	YPL278C	Q08990	100 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	DFM1	Q12743	341 aa	Known RBP	3.17	□□□□□ -1.9
PMS1	YNL082W	LYS2	P07702	1392 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	THP2	O13539	261 aa	Known RBP	3.17	□□□□□ -1.9
PMS1	YNL082W	TAF14	P35189	244 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	GOS1	P38736	223 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	YIA6	P40556	373 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	TRM10	Q12400	293 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	AUS1	Q08409	1394 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	PMD1	P32634	1753 aa		3.16	□□□□□ -1.9
PMS1	YNL082W	YJR012C	P47087	207 aa		3.16	□□□□□ -1.9
PMS1	YNL082W	YOS9	Q99220	542 aa		3.16	□□□□□ -1.9
PMS1	YNL082W	OSM1	P21375	501 aa	Known RBP	3.16	□□□□□ -1.9
PMS1	YNL082W	YEL045C	P32616	141 aa		3.16	□□□□□ -1.9
PMS1	YNL082W	MIC12	P38341	106 aa		3.16	□□□□□ -1.9
PMS1	YNL082W	TDA11	P38854	504 aa		3.16	□□□□□ -1.9
PMS1	YNL082W	RRT13	P40042	185 aa		3.16	□□□□□ -1.9
PMS1	YNL082W	SNZ1	Q03148	297 aa		3.16	□□□□□ -1.9
PMS1	YNL082W	MRPS17	Q03246	237 aa	Predicted RBP	3.16	□□□□□ -1.9
PMS1	YNL082W	KRE28	Q04431	385 aa		3.16	□□□□□ -1.9
PMS1	YNL082W	YKL183C-A	Q3E765	70 aa		3.16	□□□□□ -1.9
PMS1	YNL082W	YCL012C	Q8J0M4	134 aa		3.16	□□□□□ -1.9
PMS1	YNL082W	CDC33	P07260	213 aa	Known RBP	3.15	□□□□□ -1.9
PMS1	YNL082W	PCL1	P24867	279 aa		3.15	□□□□□ -1.9
PMS1	YNL082W	IFM1	P25038	676 aa		3.15	□□□□□ -1.9
PMS1	YNL082W	PEX3	P28795	441 aa		3.15	□□□□□ -1.9
PMS1	YNL082W	NTF2	P33331	125 aa	Known RBP	3.15	□□□□□ -1.9
PMS1	YNL082W	SIP3	P38717	1229 aa		3.15	□□□□□ -1.9
PMS1	YNL082W	ERG28	P40030	148 aa		3.15	□□□□□ -1.9
PMS1	YNL082W	VPS21	P36017	210 aa	Known RBP	3.15	□□□□□ -1.91
PMS1	YNL082W	POP8	P38208	133 aa		3.15	□□□□□ -1.91
PMS1	YNL082W	SEN34	P39707	275 aa		3.15	□□□□□ -1.91
PMS1	YNL082W	TOS8	P53147	276 aa		3.15	□□□□□ -1.91
PMS1	YNL082W	YHR139C-A	O13536	103 aa		3.14	□□□□□ -1.91
PMS1	YNL082W	MRP1	P10662	321 aa	Known RBP	3.14	□□□□□ -1.91
PMS1	YNL082W	VPH2	P32341	215 aa		3.14	□□□□□ -1.91
PMS1	YNL082W	MGM101	P32787	269 aa	Known RBP	3.14	□□□□□ -1.91
PMS1	YNL082W	MRPL3	P36516	390 aa		3.14	□□□□□ -1.91
PMS1	YNL082W	YBL081W	P38180	368 aa	Known RBP	3.14	□□□□□ -1.91
PMS1	YNL082W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
PMS1	YNL082W	MED8	P38304	223 aa		3.14	□□□□□ -1.91
PMS1	YNL082W	PER33	Q12144	273 aa		3.14	□□□□□ -1.91
PMS1	YNL082W	YCT1	Q12235	531 aa		3.14	□□□□□ -1.91
PMS1	YNL082W	YPL119C-A	Q3E751	87 aa		3.14	□□□□□ -1.91
PMS1	YNL082W	YDR157W	A0A023PZE8	133 aa		3.14	□□□□□ -1.91
PMS1	YNL082W	RPL4A	P10664	362 aa	Known RBP	3.14	□□□□□ -1.91
PMS1	YNL082W	YFL064C	P43540	174 aa		3.14	□□□□□ -1.91
PMS1	YNL082W	YJR149W	P47177	404 aa		3.14	□□□□□ -1.91
PMS1	YNL082W	RPL4B	P49626	362 aa	Known RBP	3.14	□□□□□ -1.91
PMS1	YNL082W	ATG5	Q12380	294 aa		3.14	□□□□□ -1.91
PMS1	YNL082W	YOX1	P34161	385 aa		3.13	□□□□□ -1.91
PMS1	YNL082W	SLX1	P38324	304 aa		3.13	□□□□□ -1.91
PMS1	YNL082W	EFM1	P38732	585 aa		3.13	□□□□□ -1.91
PMS1	YNL082W	HAM1	P47119	197 aa	Known RBP	3.13	□□□□□ -1.91
PMS1	YNL082W	CWC23	P52868	283 aa	Predicted RBP	3.13	□□□□□ -1.91
PMS1	YNL082W	YBL112C	Q3E7Y4	105 aa		3.13	□□□□□ -1.91
PMS1	YNL082W	MRPL25	P23369	157 aa		3.13	□□□□□ -1.91
PMS1	YNL082W	RNA15	P25299	296 aa	Predicted RBP	3.13	□□□□□ -1.91
PMS1	YNL082W	SRB4	P32569	687 aa		3.13	□□□□□ -1.91
PMS1	YNL082W	SPS19	P32573	292 aa	Known RBP	3.13	□□□□□ -1.91
PMS1	YNL082W	CBT1	P36038	271 aa	Predicted RBP	3.13	□□□□□ -1.91
PMS1	YNL082W	HMT1	P38074	348 aa		3.13	□□□□□ -1.91
PMS1	YNL082W	ZRG17	P53735	605 aa		3.13	□□□□□ -1.91
PMS1	YNL082W	SEY1	Q99287	776 aa		3.13	□□□□□ -1.91
PMS1	YNL082W	VMA6	P32366	345 aa	Known RBP	3.12	□□□□□ -1.91
PMS1	YNL082W	ALK2	P32789	676 aa	Predicted RBP	3.12	□□□□□ -1.91
PMS1	YNL082W	SNZ3	P43545	298 aa		3.12	□□□□□ -1.91
PMS1	YNL082W	UFD1	P53044	361 aa		3.12	□□□□□ -1.91
PMS1	YNL082W	MRS2	Q01926	470 aa		3.12	□□□□□ -1.91
PMS1	YNL082W	GTO3	Q04806	366 aa		3.12	□□□□□ -1.91
PMS1	YNL082W	YMR31	P19955	123 aa		3.12	□□□□□ -1.91
PMS1	YNL082W	VPS3	P23643	1011 aa		3.12	□□□□□ -1.91
PMS1	YNL082W	PRP18	P33411	251 aa	Predicted RBP	3.12	□□□□□ -1.91
PMS1	YNL082W	UTH1	P36135	365 aa		3.12	□□□□□ -1.91
PMS1	YNL082W	GPI18	P38211	433 aa		3.12	□□□□□ -1.91
PMS1	YNL082W	YIL012W	P40551	113 aa		3.12	□□□□□ -1.91
PMS1	YNL082W	YGL262W	P53054	175 aa		3.12	□□□□□ -1.91
PMS1	YNL082W	ASF2	P32448	525 aa	Predicted RBP	3.11	□□□□□ -1.91
PMS1	YNL082W	USE1	P53146	245 aa		3.11	□□□□□ -1.91
PMS1	YNL082W	YMR114C	Q04471	368 aa	Known RBP	3.11	□□□□□ -1.91
PMS1	YNL082W	CDC123	Q05791	360 aa		3.11	□□□□□ -1.91
PMS1	YNL082W	VIK1	Q12045	647 aa		3.11	□□□□□ -1.91
PMS1	YNL082W	PPA2	P28239	310 aa		3.11	□□□□□ -1.91
PMS1	YNL082W	TPS2	P31688	896 aa	Known RBP	3.11	□□□□□ -1.91
PMS1	YNL082W	TCD1	P38756	429 aa		3.11	□□□□□ -1.91
PMS1	YNL082W	SDT1	P53078	280 aa		3.11	□□□□□ -1.91
PMS1	YNL082W	LIF1	P53150	421 aa		3.11	□□□□□ -1.91
PMS1	YNL082W	YPL039W	Q03080	316 aa		3.11	□□□□□ -1.91
PMS1	YNL082W	YDL144C	Q07589	356 aa		3.11	□□□□□ -1.91
PMS1	YNL082W	MSA1	Q08471	629 aa		3.11	□□□□□ -1.91
PMS1	YNL082W	RFM1	Q12192	310 aa		3.11	□□□□□ -1.91
PMS1	YNL082W	TFC7	Q12415	435 aa		3.11	□□□□□ -1.91
PMS1	YNL082W	FLO11	P08640	1367 aa		3.11	□□□□□ -1.91
PMS1	YNL082W	YPR117W	Q06116	2489 aa		3.11	□□□□□ -1.91
PMS1	YNL082W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
PMS1	YNL082W	COQ1	P18900	473 aa		3.1	□□□□□ -1.91
PMS1	YNL082W	SRY1	P36007	326 aa		3.1	□□□□□ -1.91
PMS1	YNL082W	MAL32	P38158	584 aa		3.1	□□□□□ -1.91
PMS1	YNL082W	ARN2	P38724	620 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms