RNA–Protein interactions for RNA: YNL082W

PMS1, Transcript of ATP-binding protein required for mismatch repair, yeastyeast

Gene PMS1, Length 2,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMS1YNL082W DRS1P32892 752 aaKnown RBP11.32□□□□□ -0.6
PMS1YNL082W MTC1P47018 478 aaKnown RBP10.8□□□□□ -0.68
PMS1YNL082W BFR2Q06631 534 aaKnown RBP9.97□□□□□ -0.81
PMS1YNL082W TFA1P36100 482 aa9.86□□□□□ -0.83
PMS1YNL082W AVT3P36062 692 aa9.63□□□□□ -0.87
PMS1YNL082W DIP2Q12220 943 aaPredicted RBP9.49□□□□□ -0.89
PMS1YNL082W RSE1Q04693 1361 aaKnown RBP8.72□□□□□ -1.01
PMS1YNL082W RPG1P38249 964 aaKnown RBP8.5□□□□□ -1.05
PMS1YNL082W ISW2Q08773 1120 aa8.5□□□□□ -1.05
PMS1YNL082W RQC2Q12532 1038 aaKnown RBP8.48□□□□□ -1.05
PMS1YNL082W PRI1P10363 409 aa8.4□□□□□ -1.06
PMS1YNL082W RPL17AP05740 184 aaKnown RBP8.4□□□□□ -1.07
PMS1YNL082W RPL17BP46990 184 aaKnown RBP8.4□□□□□ -1.07
PMS1YNL082W SPT21P35209 758 aa8.33□□□□□ -1.08
PMS1YNL082W DMA1P38823 416 aa8.33□□□□□ -1.08
PMS1YNL082W RIM101P33400 625 aa8.26□□□□□ -1.09
PMS1YNL082W PTP3P40048 928 aa8.21□□□□□ -1.09
PMS1YNL082W REB1P21538 810 aa8.15□□□□□ -1.11
PMS1YNL082W OXP1P28273 1286 aa8.1□□□□□ -1.11
PMS1YNL082W FAP1P53971 965 aa8.09□□□□□ -1.11
PMS1YNL082W AAD16Q02895 342 aa8.08□□□□□ -1.12
PMS1YNL082W SSP1P38871 571 aa8.03□□□□□ -1.12
PMS1YNL082W TSR3Q12094 313 aaKnown RBP7.99□□□□□ -1.13
PMS1YNL082W YKR023WP36119 530 aaKnown RBP7.93□□□□□ -1.14
PMS1YNL082W YLR271WQ06152 274 aa7.93□□□□□ -1.14
PMS1YNL082W TAF7Q05021 590 aa7.89□□□□□ -1.15
PMS1YNL082W YAH1Q12184 172 aaKnown RBP7.86□□□□□ -1.15
PMS1YNL082W SAS10Q12136 610 aaPredicted RBP7.78□□□□□ -1.16
PMS1YNL082W LEO1P38439 464 aa7.76□□□□□ -1.17
PMS1YNL082W CST9Q06032 482 aa7.74□□□□□ -1.17
PMS1YNL082W TFC8Q12308 588 aa7.71□□□□□ -1.18
PMS1YNL082W DCD1P06773 312 aa7.7□□□□□ -1.18
PMS1YNL082W HOP09932 586 aa7.7□□□□□ -1.18
PMS1YNL082W MGA2P40578 1113 aa7.68□□□□□ -1.18
PMS1YNL082W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
PMS1YNL082W YIL055CP40523 627 aaKnown RBP7.67□□□□□ -1.18
PMS1YNL082W RSM7P47150 247 aa7.67□□□□□ -1.18
PMS1YNL082W PSD2P53037 1138 aaKnown RBP7.65□□□□□ -1.18
PMS1YNL082W CDC27P38042 758 aa7.63□□□□□ -1.19
PMS1YNL082W YCK3P39962 524 aa7.62□□□□□ -1.19
PMS1YNL082W LEU3P08638 886 aa7.61□□□□□ -1.19
PMS1YNL082W PRY3P47033 881 aa7.61□□□□□ -1.19
PMS1YNL082W AI2P03876 854 aa7.54□□□□□ -1.2
PMS1YNL082W BCH2P36122 765 aa7.53□□□□□ -1.2
PMS1YNL082W MRPL32P25348 183 aa7.5□□□□□ -1.21
PMS1YNL082W RAM2P29703 316 aa7.5□□□□□ -1.21
PMS1YNL082W RCR1P38212 213 aa7.48□□□□□ -1.21
PMS1YNL082W ABP1P15891 592 aaKnown RBP7.42□□□□□ -1.22
PMS1YNL082W EPS1P40557 701 aa7.37□□□□□ -1.23
PMS1YNL082W YPR148CQ06523 435 aa7.37□□□□□ -1.23
PMS1YNL082W BDF1P35817 686 aa7.35□□□□□ -1.23
PMS1YNL082W SET1P38827 1080 aaKnown RBP7.34□□□□□ -1.23
PMS1YNL082W MRM1P25270 412 aa7.33□□□□□ -1.24
PMS1YNL082W DMA2P53924 522 aa7.33□□□□□ -1.24
PMS1YNL082W BBC1P47068 1157 aa7.29□□□□□ -1.24
PMS1YNL082W RPN1P38764 993 aaKnown RBP7.28□□□□□ -1.24
PMS1YNL082W VPS70P47161 811 aa7.26□□□□□ -1.25
PMS1YNL082W VPS29P38759 282 aa7.24□□□□□ -1.25
PMS1YNL082W MAK11P20484 414 aaKnown RBP7.22□□□□□ -1.25
PMS1YNL082W RTG3P38165 486 aa7.2□□□□□ -1.26
PMS1YNL082W SCY1P53009 804 aa7.2□□□□□ -1.26
PMS1YNL082W DSF2P38213 736 aa7.19□□□□□ -1.26
PMS1YNL082W CKB1P43639 278 aa7.18□□□□□ -1.26
PMS1YNL082W SPB4P25808 606 aaPredicted RBP7.17□□□□□ -1.26
PMS1YNL082W MAP2P38174 421 aaKnown RBP7.16□□□□□ -1.26
PMS1YNL082W HAA1Q12753 694 aaKnown RBP7.15□□□□□ -1.26
PMS1YNL082W COQ8P27697 501 aa7.14□□□□□ -1.27
PMS1YNL082W EDS1P38073 919 aa7.14□□□□□ -1.27
PMS1YNL082W STS1P38637 319 aa7.14□□□□□ -1.27
PMS1YNL082W PBS2P08018 668 aa7.11□□□□□ -1.27
PMS1YNL082W IFH1P39520 1085 aa7.1□□□□□ -1.27
PMS1YNL082W NUP42P49686 430 aaKnown RBP7.08□□□□□ -1.28
PMS1YNL082W DIT2P21595 489 aa7.06□□□□□ -1.28
PMS1YNL082W UBP10P53874 792 aaPredicted RBP7.06□□□□□ -1.28
PMS1YNL082W KIN1P13185 1064 aa7.05□□□□□ -1.28
PMS1YNL082W GLC3P32775 704 aa7.03□□□□□ -1.28
PMS1YNL082W YNR021WP53723 404 aaKnown RBP7.03□□□□□ -1.28
PMS1YNL082W YFR006WP43590 535 aa7.01□□□□□ -1.29
PMS1YNL082W YMR1P47147 688 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
PMS1YNL082W DBP1P24784 617 aaKnown RBP6.99□□□□□ -1.29
PMS1YNL082W IES2P40154 320 aa6.99□□□□□ -1.29
PMS1YNL082W NOP53Q12080 455 aaKnown RBP6.99□□□□□ -1.29
PMS1YNL082W RLF2Q12495 606 aa6.99□□□□□ -1.29
PMS1YNL082W MIF2P35201 549 aa6.98□□□□□ -1.29
PMS1YNL082W GUA1P38625 525 aaKnown RBP6.98□□□□□ -1.29
PMS1YNL082W REF2P42073 533 aaPredicted RBP6.97□□□□□ -1.29
PMS1YNL082W AIM7Q12156 149 aa6.97□□□□□ -1.29
PMS1YNL082W MAM3Q12296 706 aa6.97□□□□□ -1.29
PMS1YNL082W YDR090CQ03193 310 aa6.96□□□□□ -1.3
PMS1YNL082W PTC3P34221 468 aaKnown RBP6.96□□□□□ -1.3
PMS1YNL082W SLX5P32828 619 aaKnown RBP6.95□□□□□ -1.3
PMS1YNL082W COX6P00427 148 aa6.93□□□□□ -1.3
PMS1YNL082W UBP14P38237 781 aaKnown RBP6.93□□□□□ -1.3
PMS1YNL082W YOR238WQ08634 303 aa6.9□□□□□ -1.31
PMS1YNL082W PIB1Q06651 286 aa6.86□□□□□ -1.31
PMS1YNL082W SOL3P38858 249 aa6.86□□□□□ -1.31
PMS1YNL082W YLR326WQ06170 240 aaKnown RBP6.86□□□□□ -1.31
PMS1YNL082W YGL015CP33199 130 aa6.85□□□□□ -1.31
PMS1YNL082W VHR2P40041 505 aa6.84□□□□□ -1.31
PMS1YNL082W VMA1P17255 1071 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms