RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C APC2Q12440 853 aa4.49□□□□□ -1.69
SCM3YDL139C COX1P00401 534 aa4.48□□□□□ -1.69
SCM3YDL139C GLK1P17709 500 aaKnown RBP4.48□□□□□ -1.69
SCM3YDL139C EXG1P23776 448 aaKnown RBP4.48□□□□□ -1.69
SCM3YDL139C PUT3P25502 979 aaPredicted RBP4.48□□□□□ -1.69
SCM3YDL139C SIP1P32578 815 aa4.48□□□□□ -1.69
SCM3YDL139C SUR1P33300 382 aa4.48□□□□□ -1.69
SCM3YDL139C WBP1P33767 430 aaKnown RBP4.48□□□□□ -1.69
SCM3YDL139C FLO10P36170 1169 aa4.48□□□□□ -1.69
SCM3YDL139C MRPL15P36523 253 aa4.48□□□□□ -1.69
SCM3YDL139C PAU24P38155 120 aa4.48□□□□□ -1.69
SCM3YDL139C YHR122WP38829 231 aa4.48□□□□□ -1.69
SCM3YDL139C YHR180WP38868 163 aa4.48□□□□□ -1.69
SCM3YDL139C HPA3P39979 161 aa4.48□□□□□ -1.69
SCM3YDL139C IRC18P47056 224 aa4.48□□□□□ -1.69
SCM3YDL139C APM1Q00776 475 aaPredicted RBP4.48□□□□□ -1.69
SCM3YDL139C SRL4Q03085 281 aa4.48□□□□□ -1.69
SCM3YDL139C YDR102CQ03864 110 aa4.48□□□□□ -1.69
SCM3YDL139C PEX10Q05568 337 aa4.48□□□□□ -1.69
SCM3YDL139C SNT309Q06091 175 aaPredicted RBP4.48□□□□□ -1.69
SCM3YDL139C YPR127WQ06494 345 aa4.48□□□□□ -1.69
SCM3YDL139C SET6Q12529 373 aa4.48□□□□□ -1.69
SCM3YDL139C RIP1P08067 215 aa4.47□□□□□ -1.69
SCM3YDL139C AQY1P0CD91 305 aa4.47□□□□□ -1.69
SCM3YDL139C DAL82P21705 255 aa4.47□□□□□ -1.69
SCM3YDL139C JEN1P36035 616 aa4.47□□□□□ -1.69
SCM3YDL139C VMA22P38784 181 aa4.47□□□□□ -1.69
SCM3YDL139C MTC6P38849 526 aa4.47□□□□□ -1.69
SCM3YDL139C NAB3P38996 802 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
SCM3YDL139C PAC2P39937 518 aa4.47□□□□□ -1.69
SCM3YDL139C YER184CP39961 794 aa4.47□□□□□ -1.69
SCM3YDL139C CAT5P41735 233 aa4.47□□□□□ -1.69
SCM3YDL139C MNN5P46982 586 aa4.47□□□□□ -1.69
SCM3YDL139C MDV1P47025 714 aa4.47□□□□□ -1.69
SCM3YDL139C YGR126WP53274 230 aa4.47□□□□□ -1.69
SCM3YDL139C PAU12P53343 120 aa4.47□□□□□ -1.69
SCM3YDL139C YLR352WQ06479 807 aa4.47□□□□□ -1.69
SCM3YDL139C YPR172WQ06608 200 aa4.47□□□□□ -1.69
SCM3YDL139C TSR2Q06672 205 aaKnown RBP4.47□□□□□ -1.69
SCM3YDL139C SWT1Q12104 458 aa4.47□□□□□ -1.69
SCM3YDL139C MCP1Q12106 302 aa4.47□□□□□ -1.69
SCM3YDL139C TMS1Q12116 473 aa4.47□□□□□ -1.69
SCM3YDL139C RLM1Q12224 676 aa4.47□□□□□ -1.69
SCM3YDL139C RTN2Q12443 393 aa4.47□□□□□ -1.69
SCM3YDL139C FRE6Q12473 712 aa4.47□□□□□ -1.69
SCM3YDL139C PCL9Q12477 304 aa4.47□□□□□ -1.69
SCM3YDL139C YBR298C-AQ8TGK4 73 aa4.47□□□□□ -1.69
SCM3YDL139C YLR302CO13544 120 aa4.46□□□□□ -1.7
SCM3YDL139C MRS4P23500 304 aa4.46□□□□□ -1.7
SCM3YDL139C ATG15P25641 520 aa4.46□□□□□ -1.7
SCM3YDL139C FUN19P28003 413 aaPredicted RBP4.46□□□□□ -1.7
SCM3YDL139C TMA19P35691 167 aaKnown RBP4.46□□□□□ -1.7
SCM3YDL139C YKL071WP36086 256 aa4.46□□□□□ -1.7
SCM3YDL139C UTP30P36144 274 aaKnown RBP4.46□□□□□ -1.7
SCM3YDL139C DDI1P40087 428 aa4.46□□□□□ -1.7
SCM3YDL139C ATG18P43601 500 aa4.46□□□□□ -1.7
SCM3YDL139C BNA6P43619 295 aa4.46□□□□□ -1.7
SCM3YDL139C PGU1P47180 361 aa4.46□□□□□ -1.7
SCM3YDL139C OCA1P50946 238 aaPredicted RBP4.46□□□□□ -1.7
SCM3YDL139C ORM1P53224 222 aa4.46□□□□□ -1.7
SCM3YDL139C YGR042WP53227 271 aa4.46□□□□□ -1.7
SCM3YDL139C PDR16P53860 351 aaKnown RBP4.46□□□□□ -1.7
SCM3YDL139C MRP51Q02950 344 aa4.46□□□□□ -1.7
SCM3YDL139C MRPL1Q04599 285 aa4.46□□□□□ -1.7
SCM3YDL139C UTP21Q06078 939 aaPredicted RBP4.46□□□□□ -1.7
SCM3YDL139C ORM2Q06144 216 aa4.46□□□□□ -1.7
SCM3YDL139C YOR376WQ08900 122 aa4.46□□□□□ -1.7
SCM3YDL139C YDL109CQ12103 647 aa4.46□□□□□ -1.7
SCM3YDL139C CDC39P25655 2108 aaKnown RBP4.45□□□□□ -1.7
SCM3YDL139C RPL3P14126 387 aaKnown RBP4.45□□□□□ -1.7
SCM3YDL139C MDH2P22133 377 aa4.45□□□□□ -1.7
SCM3YDL139C ERG8P24521 451 aa4.45□□□□□ -1.7
SCM3YDL139C MRP20P32387 263 aa4.45□□□□□ -1.7
SCM3YDL139C ECT1P33412 323 aa4.45□□□□□ -1.7
SCM3YDL139C SDS24P38314 527 aa4.45□□□□□ -1.7
SCM3YDL139C VBA2P38358 474 aaKnown RBP4.45□□□□□ -1.7
SCM3YDL139C GRE3P38715 327 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
SCM3YDL139C RFC4P40339 323 aaKnown RBP4.45□□□□□ -1.7
SCM3YDL139C PHB1P40961 287 aa4.45□□□□□ -1.7
SCM3YDL139C OTU1P43558 301 aa4.45□□□□□ -1.7
SCM3YDL139C YGL101WP53144 215 aa4.45□□□□□ -1.7
SCM3YDL139C RRN11Q04712 507 aa4.45□□□□□ -1.7
SCM3YDL139C IPK1Q06667 281 aa4.45□□□□□ -1.7
SCM3YDL139C COQ10Q08058 207 aa4.45□□□□□ -1.7
SCM3YDL139C YOR283WQ12040 230 aaKnown RBP4.45□□□□□ -1.7
SCM3YDL139C SUS1Q6WNK7 96 aa4.45□□□□□ -1.7
SCM3YDL139C CDC31P06704 161 aaKnown RBP4.44□□□□□ -1.7
SCM3YDL139C PDA1P16387 420 aaKnown RBP4.44□□□□□ -1.7
SCM3YDL139C LAC1P28496 418 aa4.44□□□□□ -1.7
SCM3YDL139C ERG9P29704 444 aa4.44□□□□□ -1.7
SCM3YDL139C HOM6P31116 359 aaKnown RBP4.44□□□□□ -1.7
SCM3YDL139C PMT2P31382 759 aa4.44□□□□□ -1.7
SCM3YDL139C ATS1P31386 333 aa4.44□□□□□ -1.7
SCM3YDL139C RPC34P32910 317 aa4.44□□□□□ -1.7
SCM3YDL139C CHK1P38147 527 aa4.44□□□□□ -1.7
SCM3YDL139C FIG1P38224 298 aa4.44□□□□□ -1.7
SCM3YDL139C MBA1P38300 278 aa4.44□□□□□ -1.7
SCM3YDL139C YIL067CP40514 678 aa4.44□□□□□ -1.7
SCM3YDL139C CUP9P41817 306 aa4.44□□□□□ -1.7
SCM3YDL139C YGR210CP42942 411 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms