RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeast

Gene RPN11, Length 921 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN11	YFR004W	NUP53	Q03790	475 aa		5.43	□□□□□ -1.54
RPN11	YFR004W	AIM36	Q03798	255 aa		5.43	□□□□□ -1.54
RPN11	YFR004W	DLT1	Q04216	342 aa		5.43	□□□□□ -1.54
RPN11	YFR004W	NMA1	Q06178	401 aa	Known RBP	5.43	□□□□□ -1.54
RPN11	YFR004W	RRP9	Q06506	573 aa	Known RBP	5.43	□□□□□ -1.54
RPN11	YFR004W	TAZ1	Q06510	381 aa		5.43	□□□□□ -1.54
RPN11	YFR004W	SYO1	Q07395	620 aa		5.43	□□□□□ -1.54
RPN11	YFR004W	RSC58	Q07979	502 aa		5.43	□□□□□ -1.54
RPN11	YFR004W	YNG1	Q08465	219 aa		5.43	□□□□□ -1.54
RPN11	YFR004W	YOR289W	Q12012	251 aa	Predicted RBP	5.43	□□□□□ -1.54
RPN11	YFR004W	RTR2	Q12378	196 aa		5.43	□□□□□ -1.54
RPN11	YFR004W	ATG31	Q12421	196 aa		5.43	□□□□□ -1.54
RPN11	YFR004W	DET1	Q99288	334 aa	Known RBP	5.43	□□□□□ -1.54
RPN11	YFR004W	SOD2	P00447	233 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	ERG4	P25340	473 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	YCP4	P25349	247 aa	Known RBP	5.42	□□□□□ -1.54
RPN11	YFR004W	MXR2	P25566	168 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	PRE2	P30656	287 aa	Known RBP	5.42	□□□□□ -1.54
RPN11	YFR004W	RPD3	P32561	433 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	MTH1	P35198	433 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	YOR062C	P36025	268 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	ANS1	P38832	159 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	PKP1	P40530	394 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	SMK1	P41808	388 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	SHR5	P41912	237 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	PMT5	P52867	743 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	SAY1	P53324	424 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	HOL1	P53389	586 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	YNR062C	P53748	327 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	SNO4	Q04902	237 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	ASR1	Q06834	288 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	BRX1	Q08235	291 aa	Known RBP	5.42	□□□□□ -1.54
RPN11	YFR004W	HSP33	Q08914	237 aa	Known RBP	5.42	□□□□□ -1.54
RPN11	YFR004W	HSP32	Q08992	237 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	NPC2	Q12408	173 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	FRE6	Q12473	712 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	DFG16	Q99234	619 aa		5.42	□□□□□ -1.54
RPN11	YFR004W	PDA1	P16387	420 aa	Known RBP	5.41	□□□□□ -1.54
RPN11	YFR004W	RNA14	P25298	677 aa	Known RBP	5.41	□□□□□ -1.54
RPN11	YFR004W	PUT3	P25502	979 aa	Predicted RBP	5.41	□□□□□ -1.54
RPN11	YFR004W	PBN1	P25580	416 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	DOA4	P32571	926 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	TIM12	P32830	109 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	ECT1	P33412	323 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	MRPL3	P36516	390 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	MAL32	P38158	584 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	CCZ1	P38273	704 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	TRR2	P38816	342 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	PHO90	P39535	881 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	CAT5	P41735	233 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	SFH5	P47008	294 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	SNX4	P47057	423 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	MAL12	P53341	584 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	DID2	P69771	204 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	YMR130W	Q04223	302 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	YLR224W	Q05947	369 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	CYK3	Q07533	885 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	PRS5	Q12265	496 aa	Known RBP	5.41	□□□□□ -1.54
RPN11	YFR004W	INP53	Q12271	1107 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	YOR214C	Q12282	236 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	YGL194C-A	Q2V2P6	80 aa		5.41	□□□□□ -1.54
RPN11	YFR004W	YPK2	P18961	677 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	PAU2	P32612	120 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	VPS17	P32913	551 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	RRP4	P38792	359 aa	Known RBP	5.4	□□□□□ -1.54
RPN11	YFR004W	YIL166C	P40445	542 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	TIR3	P40552	269 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	BAP3	P41815	604 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	PMT6	P42934	759 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	RPE1	P46969	238 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	APS3	P47064	194 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	JAC1	P53193	184 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	YDR209C	Q03480	137 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	SPC19	Q03954	165 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	SEC13	Q04491	297 aa	Known RBP	5.4	□□□□□ -1.54
RPN11	YFR004W	COX20	Q04935	205 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	YLR283W	Q05867	314 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	SNT309	Q06091	175 aa	Predicted RBP	5.4	□□□□□ -1.54
RPN11	YFR004W	YPR091C	Q06833	770 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	FMP40	Q08968	688 aa	Predicted RBP	5.4	□□□□□ -1.54
RPN11	YFR004W	RDI1	Q12434	202 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	APC2	Q12440	853 aa		5.4	□□□□□ -1.54
RPN11	YFR004W	PHO2	P07269	559 aa		5.39	□□□□□ -1.55
RPN11	YFR004W	MRP1	P10662	321 aa	Known RBP	5.39	□□□□□ -1.55
RPN11	YFR004W	GPI12	P23797	304 aa		5.39	□□□□□ -1.55
RPN11	YFR004W	ITR1	P30605	584 aa		5.39	□□□□□ -1.55
RPN11	YFR004W	KRE6	P32486	720 aa		5.39	□□□□□ -1.55
RPN11	YFR004W	TAT1	P38085	619 aa		5.39	□□□□□ -1.55
RPN11	YFR004W	TCM62	P38228	572 aa	Known RBP	5.39	□□□□□ -1.55
RPN11	YFR004W	IFA38	P38286	347 aa		5.39	□□□□□ -1.55
RPN11	YFR004W	PRP39	P39682	629 aa	Known RBP	5.39	□□□□□ -1.55
RPN11	YFR004W	VPS52	P39904	641 aa		5.39	□□□□□ -1.55
RPN11	YFR004W	RFC4	P40339	323 aa	Known RBP	5.39	□□□□□ -1.55
RPN11	YFR004W	NAS2	P40555	220 aa		5.39	□□□□□ -1.55
RPN11	YFR004W	IDS2	P46958	469 aa		5.39	□□□□□ -1.55
RPN11	YFR004W	MDE1	P47095	244 aa		5.39	□□□□□ -1.55
RPN11	YFR004W	AIM25	P47140	327 aa		5.39	□□□□□ -1.55
RPN11	YFR004W	SRB7	P47822	140 aa		5.39	□□□□□ -1.55
RPN11	YFR004W	MTL1	P53214	551 aa		5.39	□□□□□ -1.55
RPN11	YFR004W	BSC5	P53755	489 aa		5.39	□□□□□ -1.55

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