RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI3	YPR189W	CWC23	P52868	283 aa	Predicted RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	RTC4	P53850	401 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	IGO1	P53897	168 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	ARK1	P53974	638 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	ODC1	Q03028	310 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	YMR226C	Q05016	267 aa	Known RBP	1.43	□□□□□ -2.18
SKI3	YPR189W	ALE1	Q08548	619 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	YDL009C	Q12210	107 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	YKL183C-A	Q3E765	70 aa		1.43	□□□□□ -2.18
SKI3	YPR189W	RPL43A	P0CX25	92 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	RPL43B	P0CX26	92 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	REV1	P12689	985 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	SPS100	P13130	326 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	SPT15	P13393	240 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	STE18	P18852	110 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	IES6	P32617	166 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	GDH2	P33327	1092 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	TIR2	P33890	251 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	EGD2	P38879	174 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	COX14	P39103	70 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	NPT1	P39683	429 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	YNL247W	P53852	767 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	ASR1	Q06834	288 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	YLR108C	Q12259	485 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	FLO11	P08640	1367 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	RPL27A	P0C2H6	136 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	RPL27B	P0C2H7	136 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	RPL35A	P0CX84	120 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	RPL35B	P0CX85	120 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	CKA2	P19454	339 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	YMR31	P19955	123 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	NUP2	P32499	720 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	SPS19	P32573	292 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	RAD5	P32849	1169 aa	Predicted RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	SPC34	P36131	295 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	NAT2	P37293	288 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	MRX3	P38172	270 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	YER184C	P39961	794 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	NBP1	P52919	319 aa	Predicted RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	CPD1	P53314	239 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	NOP19	P53317	196 aa	Predicted RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	GOR1	P53839	350 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	RPM2	Q02773	1202 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	RTT103	Q05543	409 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	YDR157W	A0A023PZE8	133 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	TUB1	P09733	447 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	GLN3	P18494	730 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	YKL187C	P34231	750 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	VPS21	P36017	210 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	MTW1	P39731	289 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	YNL194C	P40169	301 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	MAM33	P40513	266 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	YRB1	P41920	201 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	IKS1	P47042	667 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	SLI1	P53304	468 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	ZRG17	P53735	605 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	YPL077C	Q02831	240 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	YEH2	Q07950	538 aa		1.42	□□□□□ -2.18
SKI3	YPR189W	ABP140	Q08641	628 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	TPT1	Q12272	230 aa	Known RBP	1.42	□□□□□ -2.18
SKI3	YPR189W	RPL31A	P0C2H8	113 aa	Known RBP	1.41	□□□□□ -2.18
SKI3	YPR189W	YBR121C-A	P0C5L4	52 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	CTA1	P15202	515 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	KDX1	P36005	433 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	PRS2	P38620	318 aa	Known RBP	1.41	□□□□□ -2.18
SKI3	YPR189W	DDI1	P40087	428 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	TAD2	P47058	250 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	SEC13	Q04491	297 aa	Known RBP	1.41	□□□□□ -2.18
SKI3	YPR189W	BCH1	Q05029	724 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	RGT2	Q12300	763 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	POX1	P13711	748 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	CPR1	P14832	162 aa	Known RBP	1.41	□□□□□ -2.18
SKI3	YPR189W	MTF1	P14908	341 aa	Known RBP	1.41	□□□□□ -2.18
SKI3	YPR189W	KAR9	P32526	644 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	YKL063C	P35725	167 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	MDV1	P47025	714 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	VEL1	P53058	206 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	RSC9	Q03124	581 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	FAR8	Q05040	523 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	CTR3	Q06686	241 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	DSE3	Q08729	430 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	UTP23	Q12339	254 aa	Known RBP	1.41	□□□□□ -2.18
SKI3	YPR189W	PNS1	Q12412	539 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	PCL9	Q12477	304 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	YCR024C-B	Q3E7Z8	88 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	RPL16B	P26785	198 aa	Known RBP	1.41	□□□□□ -2.18
SKI3	YPR189W	AGA1	P32323	725 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	MAK5	P38112	773 aa	Predicted RBP	1.41	□□□□□ -2.18
SKI3	YPR189W	YHR035W	P38769	630 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	SEC72	P39742	193 aa	Known RBP	1.41	□□□□□ -2.18
SKI3	YPR189W	SMB1	P40018	196 aa	Known RBP	1.41	□□□□□ -2.18
SKI3	YPR189W	THO1	P40040	218 aa	Known RBP	1.41	□□□□□ -2.18
SKI3	YPR189W	COX15	P40086	486 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	XBP1	P40489	647 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	GDS1	P41913	522 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	CTK3	P46963	296 aa	Predicted RBP	1.41	□□□□□ -2.18
SKI3	YPR189W	YJR012C	P47087	207 aa		1.41	□□□□□ -2.18
SKI3	YPR189W	JHD2	P47156	728 aa	Predicted RBP	1.41	□□□□□ -2.18
SKI3	YPR189W	DIG1	Q03063	452 aa	Known RBP	1.41	□□□□□ -2.18
SKI3	YPR189W	PRM6	Q04705	352 aa		1.41	□□□□□ -2.18

Retrieved 100 of 5,963 RNA–protein pairs in 72.8 ms