RNA–Protein interactions for RNA: YML010W

SPT5, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeast

Gene SPT5, Length 3,192 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT5	YML010W	PAN3	P36102	679 aa	Predicted RBP	11.91	□□□□□ -0.5
SPT5	YML010W	AUR1	P36107	401 aa	Predicted RBP	11.91	□□□□□ -0.5
SPT5	YML010W	YJL016W	P47072	561 aa		11.91	□□□□□ -0.5
SPT5	YML010W	NRK1	P53915	240 aa		11.91	□□□□□ -0.5
SPT5	YML010W	TMN2	Q04562	672 aa		11.91	□□□□□ -0.5
SPT5	YML010W	YLR111W	Q12528	110 aa		11.91	□□□□□ -0.5
SPT5	YML010W	SSA3	P09435	649 aa	Known RBP	11.91	□□□□□ -0.5
SPT5	YML010W	SIP1	P32578	815 aa		11.91	□□□□□ -0.5
SPT5	YML010W	SFA1	P32771	386 aa		11.91	□□□□□ -0.5
SPT5	YML010W	PUG1	P40100	303 aa		11.91	□□□□□ -0.5
SPT5	YML010W	ODC2	Q99297	307 aa		11.91	□□□□□ -0.5
SPT5	YML010W	ZRC1	P20107	442 aa		11.9	□□□□□ -0.5
SPT5	YML010W	MCK1	P21965	375 aa	Known RBP	11.9	□□□□□ -0.5
SPT5	YML010W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	11.9	□□□□□ -0.5	not detected
SPT5	YML010W	VBA4	Q04602	768 aa	Known RBP	11.9	□□□□□ -0.5
SPT5	YML010W	PRM4	Q12498	284 aa		11.9	□□□□□ -0.5
SPT5	YML010W	MCM10	P32354	571 aa		11.9	□□□□□ -0.5
SPT5	YML010W	MSN4	P33749	630 aa		11.9	□□□□□ -0.5
SPT5	YML010W	ECM15	P35195	104 aa		11.9	□□□□□ -0.5
SPT5	YML010W	POA1	P38218	177 aa		11.9	□□□□□ -0.5
SPT5	YML010W	YNR062C	P53748	327 aa		11.9	□□□□□ -0.5
SPT5	YML010W	FDH1	Q08911	376 aa		11.9	□□□□□ -0.5
SPT5	YML010W	YDL211C	Q12121	372 aa		11.9	□□□□□ -0.5
SPT5	YML010W	YPR145C-A	Q2V2P0	78 aa		11.9	□□□□□ -0.5
SPT5	YML010W	PRE2	P30656	287 aa	Known RBP	11.89	□□□□□ -0.51
SPT5	YML010W	MNT3	P40549	630 aa		11.89	□□□□□ -0.51
SPT5	YML010W	YPR127W	Q06494	345 aa		11.89	□□□□□ -0.51
SPT5	YML010W	COX9	P07255	59 aa		11.89	□□□□□ -0.51
SPT5	YML010W	CPR2	P23285	205 aa		11.89	□□□□□ -0.51
SPT5	YML010W	PGD1	P40356	397 aa		11.89	□□□□□ -0.51
SPT5	YML010W	NPY1	P53164	384 aa		11.89	□□□□□ -0.51
SPT5	YML010W	FMP41	P53889	259 aa	Known RBP	11.89	□□□□□ -0.51
SPT5	YML010W	CAC2	Q04199	468 aa		11.89	□□□□□ -0.51
SPT5	YML010W	AIM6	Q07716	390 aa		11.89	□□□□□ -0.51
SPT5	YML010W	RTK1	Q12100	620 aa	Predicted RBP	11.89	□□□□□ -0.51
SPT5	YML010W	TFB5	Q3E7C1	72 aa	Predicted RBP	11.89	□□□□□ -0.51
SPT5	YML010W	NAM2	P11325	894 aa		11.89	□□□□□ -0.51
SPT5	YML010W	FYV6	P53913	173 aa		11.89	□□□□□ -0.51
SPT5	YML010W	SRP1	Q02821	542 aa	Known RBP	11.89	□□□□□ -0.51
SPT5	YML010W	ZEO1	Q08245	113 aa		11.89	□□□□□ -0.51
SPT5	YML010W	RPB5	P20434	215 aa		11.88	□□□□□ -0.51
SPT5	YML010W	LRS4	Q04087	347 aa	Known RBP	11.88	□□□□□ -0.51
SPT5	YML010W	NOC4	Q06512	552 aa	Predicted RBP	11.88	□□□□□ -0.51
SPT5	YML010W	DED81	P38707	554 aa	Known RBP	11.88	□□□□□ -0.51
SPT5	YML010W	FUR4	P05316	633 aa	Known RBP	11.87	□□□□□ -0.51
SPT5	YML010W	NPR1	P22211	790 aa		11.87	□□□□□ -0.51
SPT5	YML010W	RPD3	P32561	433 aa		11.87	□□□□□ -0.51
SPT5	YML010W	BUL1	P48524	976 aa		11.87	□□□□□ -0.51
SPT5	YML010W	IMD2	P38697	523 aa	Known RBP	11.87	□□□□□ -0.51
SPT5	YML010W	SLS1	P42900	643 aa		11.87	□□□□□ -0.51
SPT5	YML010W	PEX25	Q02969	394 aa		11.87	□□□□□ -0.51
SPT5	YML010W	RRT7	Q07829	113 aa		11.87	□□□□□ -0.51
SPT5	YML010W	GAL4	P04386	881 aa		11.87	□□□□□ -0.51
SPT5	YML010W	SLY41	P22215	453 aa		11.87	□□□□□ -0.51
SPT5	YML010W	SHM2	P37291	469 aa	Known RBP	11.87	□□□□□ -0.51
SPT5	YML010W	REC102	Q02721	264 aa		11.87	□□□□□ -0.51
SPT5	YML010W	ARL3	Q02804	198 aa		11.87	□□□□□ -0.51
SPT5	YML010W	SNO4	Q04902	237 aa		11.87	□□□□□ -0.51
SPT5	YML010W	YOR385W	Q08909	290 aa		11.87	□□□□□ -0.51
SPT5	YML010W	HSP33	Q08914	237 aa	Known RBP	11.87	□□□□□ -0.51
SPT5	YML010W	HSP32	Q08992	237 aa		11.87	□□□□□ -0.51
SPT5	YML010W	TPI1	P00942	248 aa	Known RBP	11.86	□□□□□ -0.51
SPT5	YML010W	ATG8	P38182	117 aa	RIP-Chip data	11.86	□□□□□ -0.51	not detected
SPT5	YML010W	YIR035C	P40579	254 aa		11.86	□□□□□ -0.51
SPT5	YML010W	MTO1	P53070	669 aa		11.86	□□□□□ -0.51
SPT5	YML010W	PFA4	Q12006	378 aa		11.86	□□□□□ -0.51
SPT5	YML010W	DET1	Q99288	334 aa	Known RBP	11.86	□□□□□ -0.51
SPT5	YML010W	BET3	P36149	193 aa		11.86	□□□□□ -0.51
SPT5	YML010W	CIN2	P46670	268 aa		11.86	□□□□□ -0.51
SPT5	YML010W	YML096W	Q04489	525 aa		11.86	□□□□□ -0.51
SPT5	YML010W	YKR104W	P0CE69	306 aa		11.85	□□□□□ -0.51
SPT5	YML010W	DBF20	P32328	564 aa		11.85	□□□□□ -0.51
SPT5	YML010W	TRM7	P38238	310 aa	Known RBP	11.85	□□□□□ -0.51
SPT5	YML010W	SDS24	P38314	527 aa		11.85	□□□□□ -0.51
SPT5	YML010W	DUG1	P43616	481 aa	Known RBP	11.85	□□□□□ -0.51
SPT5	YML010W	UBP8	P50102	471 aa		11.85	□□□□□ -0.51
SPT5	YML010W	SKO1	Q02100	647 aa		11.85	□□□□□ -0.51
SPT5	YML010W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	11.85	□□□□□ -0.51	not detected
SPT5	YML010W	EMC5	P40540	141 aa		11.85	□□□□□ -0.51
SPT5	YML010W	MRPL22	P53881	309 aa		11.85	□□□□□ -0.51
SPT5	YML010W	RFC2	P40348	353 aa		11.84	□□□□□ -0.51
SPT5	YML010W	YIP4	P53093	235 aa		11.84	□□□□□ -0.51
SPT5	YML010W	BER1	Q06688	274 aa	Known RBP	11.84	□□□□□ -0.51
SPT5	YML010W	SGA1	P08019	549 aa		11.84	□□□□□ -0.51
SPT5	YML010W	YIL077C	P40508	320 aa		11.84	□□□□□ -0.51
SPT5	YML010W	SNT309	Q06091	175 aa	Predicted RBP	11.84	□□□□□ -0.51
SPT5	YML010W	ISR1	Q06098	443 aa	Known RBP	11.84	□□□□□ -0.51
SPT5	YML010W	PUS9	Q12069	462 aa		11.84	□□□□□ -0.51
SPT5	YML010W	CDC34	P14682	295 aa		11.83	□□□□□ -0.51
SPT5	YML010W	PTR2	P32901	601 aa		11.83	□□□□□ -0.51
SPT5	YML010W	SUI1	P32911	108 aa	Known RBP	11.83	□□□□□ -0.51
SPT5	YML010W	YDL086W	Q07505	273 aa		11.83	□□□□□ -0.51
SPT5	YML010W	BRX1	Q08235	291 aa	Known RBP	11.83	□□□□□ -0.51
SPT5	YML010W	MMT2	Q08970	484 aa		11.83	□□□□□ -0.51
SPT5	YML010W	MSB2	P32334	1306 aa		11.83	□□□□□ -0.52
SPT5	YML010W	RPB3	P16370	318 aa	Known RBP	11.83	□□□□□ -0.52
SPT5	YML010W	MSK1	P32048	576 aa		11.83	□□□□□ -0.52
SPT5	YML010W	YBL010C	P32788	280 aa		11.83	□□□□□ -0.52
SPT5	YML010W	FLC3	P53121	802 aa		11.83	□□□□□ -0.52
SPT5	YML010W	CTF19	Q02732	369 aa		11.83	□□□□□ -0.52

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms