RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W YKR073CP36153 106 aa3.18□□□□□ -1.9
CAF130YGR134W YCR087C-AP37263 153 aa3.18□□□□□ -1.9
CAF130YGR134W NVJ1P38881 321 aa3.18□□□□□ -1.9
CAF130YGR134W THO1P40040 218 aaKnown RBP3.18□□□□□ -1.9
CAF130YGR134W MOG1P47123 218 aa3.18□□□□□ -1.9
CAF130YGR134W YIP1P53039 248 aa3.18□□□□□ -1.9
CAF130YGR134W VHT1P53241 593 aa3.18□□□□□ -1.9
CAF130YGR134W SMM1P53720 384 aaKnown RBP3.18□□□□□ -1.9
CAF130YGR134W CPR8P53728 308 aa3.18□□□□□ -1.9
CAF130YGR134W SNO2P53823 222 aa3.18□□□□□ -1.9
CAF130YGR134W YNL181WP53878 407 aa3.18□□□□□ -1.9
CAF130YGR134W IRC15Q02733 499 aa3.18□□□□□ -1.9
CAF130YGR134W LGE1Q02796 332 aaKnown RBP3.18□□□□□ -1.9
CAF130YGR134W YPR147CQ06522 304 aaKnown RBP3.18□□□□□ -1.9
CAF130YGR134W PLB3Q08108 686 aa3.18□□□□□ -1.9
CAF130YGR134W MCA1Q08601 432 aa3.18□□□□□ -1.9
CAF130YGR134W YOP1Q12402 180 aa3.18□□□□□ -1.9
CAF130YGR134W PNS1Q12412 539 aa3.18□□□□□ -1.9
CAF130YGR134W YHR139C-AO13536 103 aa3.17□□□□□ -1.9
CAF130YGR134W HEM1P09950 548 aaPredicted RBP3.17□□□□□ -1.9
CAF130YGR134W MRP2P10663 115 aaPredicted RBP3.17□□□□□ -1.9
CAF130YGR134W FBA1P14540 359 aaKnown RBP3.17□□□□□ -1.9
CAF130YGR134W CTA1P15202 515 aa3.17□□□□□ -1.9
CAF130YGR134W SLY1P22213 666 aa3.17□□□□□ -1.9
CAF130YGR134W POP5P28005 173 aa3.17□□□□□ -1.9
CAF130YGR134W AST1P35183 429 aa3.17□□□□□ -1.9
CAF130YGR134W ECM13P38195 257 aa3.17□□□□□ -1.9
CAF130YGR134W ARN1P38731 627 aa3.17□□□□□ -1.9
CAF130YGR134W MET30P39014 640 aa3.17□□□□□ -1.9
CAF130YGR134W RPH1P39956 796 aa3.17□□□□□ -1.9
CAF130YGR134W YER137CP40083 148 aaKnown RBP3.17□□□□□ -1.9
CAF130YGR134W IRC18P47056 224 aa3.17□□□□□ -1.9
CAF130YGR134W NUP49Q02199 472 aa3.17□□□□□ -1.9
CAF130YGR134W RPL22AP05749 121 aaKnown RBP3.17□□□□□ -1.9
CAF130YGR134W YEF1P32622 495 aa3.17□□□□□ -1.9
CAF130YGR134W YHR035WP38769 630 aa3.17□□□□□ -1.9
CAF130YGR134W CPR7P47103 393 aa3.17□□□□□ -1.9
CAF130YGR134W NRK1P53915 240 aa3.17□□□□□ -1.9
CAF130YGR134W PET191Q02772 108 aa3.17□□□□□ -1.9
CAF130YGR134W YML096WQ04489 525 aa3.17□□□□□ -1.9
CAF130YGR134W HNT3Q08702 217 aa3.17□□□□□ -1.9
CAF130YGR134W YLR053CQ12026 108 aa3.17□□□□□ -1.9
CAF130YGR134W NSL1Q12143 216 aa3.17□□□□□ -1.9
CAF130YGR134W YPL150WQ12152 901 aa3.17□□□□□ -1.9
CAF130YGR134W YCT1Q12235 531 aa3.17□□□□□ -1.9
CAF130YGR134W WTM1Q12363 437 aaKnown RBP3.17□□□□□ -1.9
CAF130YGR134W SNA3P14359 133 aa3.17□□□□□ -1.9
CAF130YGR134W YCR006CP25350 157 aa3.17□□□□□ -1.9
CAF130YGR134W REC114P32841 428 aa3.17□□□□□ -1.9
CAF130YGR134W FRE4P53746 719 aa3.17□□□□□ -1.9
CAF130YGR134W PEX10Q05568 337 aa3.17□□□□□ -1.9
CAF130YGR134W RIF2Q06208 395 aa3.17□□□□□ -1.9
CAF130YGR134W PER33Q12144 273 aa3.17□□□□□ -1.9
CAF130YGR134W TIR4Q12218 487 aaPredicted RBP3.17□□□□□ -1.9
CAF130YGR134W AHA1Q12449 350 aaKnown RBP3.17□□□□□ -1.9
CAF130YGR134W RGS2Q99188 309 aa3.17□□□□□ -1.9
CAF130YGR134W ERG4P25340 473 aa3.16□□□□□ -1.9
CAF130YGR134W NAM9P27929 486 aa3.16□□□□□ -1.9
CAF130YGR134W LAG1P38703 411 aa3.16□□□□□ -1.9
CAF130YGR134W OSH3P38713 996 aaKnown RBP3.16□□□□□ -1.9
CAF130YGR134W YJR111CP47148 283 aaKnown RBP3.16□□□□□ -1.9
CAF130YGR134W YPT32P51996 222 aaKnown RBP3.16□□□□□ -1.9
CAF130YGR134W SUR7P54003 302 aa3.16□□□□□ -1.9
CAF130YGR134W YDR248CQ03786 193 aa3.16□□□□□ -1.9
CAF130YGR134W MUM3Q08750 479 aa3.16□□□□□ -1.9
CAF130YGR134W MCT1Q12283 360 aa3.16□□□□□ -1.9
CAF130YGR134W AQY1P0CD91 305 aa3.16□□□□□ -1.9
CAF130YGR134W TFS1P14306 219 aa3.16□□□□□ -1.9
CAF130YGR134W MDH3P32419 343 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
CAF130YGR134W POP7P38291 140 aa3.16□□□□□ -1.9
CAF130YGR134W ASG7P46993 209 aa3.16□□□□□ -1.9
CAF130YGR134W SFH5P47008 294 aa3.16□□□□□ -1.9
CAF130YGR134W PCP1P53259 346 aa3.16□□□□□ -1.9
CAF130YGR134W HER2Q03557 464 aa3.16□□□□□ -1.9
CAF130YGR134W YLL056CQ12177 298 aa3.16□□□□□ -1.9
CAF130YGR134W CMK2P22517 447 aa3.15□□□□□ -1.9
CAF130YGR134W YKL063CP35725 167 aa3.15□□□□□ -1.9
CAF130YGR134W RCK1P38622 512 aa3.15□□□□□ -1.9
CAF130YGR134W IKS1P47042 667 aa3.15□□□□□ -1.9
CAF130YGR134W SNX4P47057 423 aa3.15□□□□□ -1.9
CAF130YGR134W MRPL50P53724 139 aa3.15□□□□□ -1.9
CAF130YGR134W YNL095CP53932 642 aa3.15□□□□□ -1.9
CAF130YGR134W YOR389WQ08912 624 aa3.15□□□□□ -1.9
CAF130YGR134W TPT1Q12272 230 aaKnown RBP3.15□□□□□ -1.9
CAF130YGR134W SET6Q12529 373 aa3.15□□□□□ -1.9
CAF130YGR134W HIS1P00498 297 aaKnown RBP3.15□□□□□ -1.91
CAF130YGR134W SEC4P07560 215 aaKnown RBP3.15□□□□□ -1.91
CAF130YGR134W MBR1P23493 339 aa3.15□□□□□ -1.91
CAF130YGR134W EXG1P23776 448 aaKnown RBP3.15□□□□□ -1.91
CAF130YGR134W RPL10P41805 221 aaKnown RBP3.15□□□□□ -1.91
CAF130YGR134W IDP2P41939 412 aa3.15□□□□□ -1.91
CAF130YGR134W FMP32P43557 207 aa3.15□□□□□ -1.91
CAF130YGR134W GAT1P43574 510 aa3.15□□□□□ -1.91
CAF130YGR134W TAD2P47058 250 aa3.15□□□□□ -1.91
CAF130YGR134W UBC12P52491 188 aa3.15□□□□□ -1.91
CAF130YGR134W RFM1Q12192 310 aa3.15□□□□□ -1.91
CAF130YGR134W YOR114WQ12219 294 aa3.15□□□□□ -1.91
CAF130YGR134W FOL3Q12676 427 aaPredicted RBP3.15□□□□□ -1.91
CAF130YGR134W FIG2P25653 1609 aa3.15□□□□□ -1.91
CAF130YGR134W BCY1P07278 416 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms