RNA–Protein interactions for RNA: YDR416W

SYF1, Transcript of Member of the NineTeen Complex (NTC), yeastyeast

Gene SYF1, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SYF1YDR416W YCT1Q12235 531 aa3.7□□□□□ -1.82
SYF1YDR416W SME1Q12330 94 aaPredicted RBP3.7□□□□□ -1.82
SYF1YDR416W MHP1P43638 1398 aa3.7□□□□□ -1.82
SYF1YDR416W TPI1P00942 248 aaKnown RBP3.69□□□□□ -1.82
SYF1YDR416W PUT1P09368 476 aa3.69□□□□□ -1.82
SYF1YDR416W TIR2P33890 251 aa3.69□□□□□ -1.82
SYF1YDR416W YNK1P36010 153 aaKnown RBP3.69□□□□□ -1.82
SYF1YDR416W YBR241CP38142 488 aa3.69□□□□□ -1.82
SYF1YDR416W SHG1P38337 142 aa3.69□□□□□ -1.82
SYF1YDR416W OSH3P38713 996 aaKnown RBP3.69□□□□□ -1.82
SYF1YDR416W SEO1P39709 593 aa3.69□□□□□ -1.82
SYF1YDR416W PRP24P49960 444 aaKnown RBP3.69□□□□□ -1.82
SYF1YDR416W USE1P53146 245 aa3.69□□□□□ -1.82
SYF1YDR416W PRP38Q00723 242 aaPredicted RBP3.69□□□□□ -1.82
SYF1YDR416W YOR114WQ12219 294 aa3.69□□□□□ -1.82
SYF1YDR416W SAL1D6W196 494 aa3.69□□□□□ -1.82
SYF1YDR416W RPL28P02406 149 aaKnown RBP3.69□□□□□ -1.82
SYF1YDR416W AQY1P0CD91 305 aa3.69□□□□□ -1.82
SYF1YDR416W YAR066WP0CX18 203 aa3.69□□□□□ -1.82
SYF1YDR416W YHR214WP0CX19 203 aa3.69□□□□□ -1.82
SYF1YDR416W TFS1P14306 219 aa3.69□□□□□ -1.82
SYF1YDR416W EXO70P19658 623 aa3.69□□□□□ -1.82
SYF1YDR416W CDC10P25342 322 aaKnown RBP3.69□□□□□ -1.82
SYF1YDR416W RPL16BP26785 198 aaKnown RBP3.69□□□□□ -1.82
SYF1YDR416W TRR1P29509 319 aaKnown RBP3.69□□□□□ -1.82
SYF1YDR416W TPS2P31688 896 aaKnown RBP3.69□□□□□ -1.82
SYF1YDR416W MCH2P36032 473 aa3.69□□□□□ -1.82
SYF1YDR416W FRE2P36033 711 aa3.69□□□□□ -1.82
SYF1YDR416W CSM2P40465 213 aa3.69□□□□□ -1.82
SYF1YDR416W YIA6P40556 373 aa3.69□□□□□ -1.82
SYF1YDR416W CIN2P46670 268 aa3.69□□□□□ -1.82
SYF1YDR416W SWC4P53201 476 aa3.69□□□□□ -1.82
SYF1YDR416W GND2P53319 492 aa3.69□□□□□ -1.82
SYF1YDR416W YCR100CP25606 316 aa3.68□□□□□ -1.82
SYF1YDR416W COQ3P27680 312 aa3.68□□□□□ -1.82
SYF1YDR416W NTF2P33331 125 aaKnown RBP3.68□□□□□ -1.82
SYF1YDR416W LEU5P38702 357 aa3.68□□□□□ -1.82
SYF1YDR416W DHH1P39517 506 aaKnown RBP3.68□□□□□ -1.82
SYF1YDR416W JLP2P40206 208 aa3.68□□□□□ -1.82
SYF1YDR416W RSM25P40496 264 aa3.68□□□□□ -1.82
SYF1YDR416W PMT4P46971 762 aa3.68□□□□□ -1.82
SYF1YDR416W MRM2P53123 320 aa3.68□□□□□ -1.82
SYF1YDR416W CDH1P53197 566 aa3.68□□□□□ -1.82
SYF1YDR416W SNO1Q03144 224 aa3.68□□□□□ -1.82
SYF1YDR416W CTL1Q03220 320 aaKnown RBP3.68□□□□□ -1.82
SYF1YDR416W ECI1Q05871 280 aa3.68□□□□□ -1.82
SYF1YDR416W SFH1Q06168 426 aa3.68□□□□□ -1.82
SYF1YDR416W AIM39Q08223 395 aa3.68□□□□□ -1.82
SYF1YDR416W YDL009CQ12210 107 aa3.68□□□□□ -1.82
SYF1YDR416W CAP2P13517 287 aa3.68□□□□□ -1.82
SYF1YDR416W CBS2P14905 389 aa3.68□□□□□ -1.82
SYF1YDR416W EXG1P23776 448 aaKnown RBP3.68□□□□□ -1.82
SYF1YDR416W HRR25P29295 494 aaKnown RBP3.68□□□□□ -1.82
SYF1YDR416W RAD5P32849 1169 aaPredicted RBP3.68□□□□□ -1.82
SYF1YDR416W YJL043WP47053 257 aa3.68□□□□□ -1.82
SYF1YDR416W YJR030CP47101 745 aa3.68□□□□□ -1.82
SYF1YDR416W UBC13P52490 153 aa3.68□□□□□ -1.82
SYF1YDR416W ALG13P53178 202 aa3.68□□□□□ -1.82
SYF1YDR416W COS1P53822 381 aa3.68□□□□□ -1.82
SYF1YDR416W NSG2P53898 299 aa3.68□□□□□ -1.82
SYF1YDR416W ASI3P53983 676 aa3.68□□□□□ -1.82
SYF1YDR416W YPR147CQ06522 304 aaKnown RBP3.68□□□□□ -1.82
SYF1YDR416W THI20Q08224 551 aa3.68□□□□□ -1.82
SYF1YDR416W RDL1Q12305 139 aaKnown RBP3.68□□□□□ -1.82
SYF1YDR416W UTP23Q12339 254 aaKnown RBP3.68□□□□□ -1.82
SYF1YDR416W ARP6Q12509 438 aa3.68□□□□□ -1.82
SYF1YDR416W TIP1P27654 210 aaPredicted RBP3.67□□□□□ -1.82
SYF1YDR416W KAR9P32526 644 aa3.67□□□□□ -1.82
SYF1YDR416W PHD1P36093 366 aa3.67□□□□□ -1.82
SYF1YDR416W QRI1P43123 477 aaKnown RBP3.67□□□□□ -1.82
SYF1YDR416W IRC18P47056 224 aa3.67□□□□□ -1.82
SYF1YDR416W NUP57P48837 541 aa3.67□□□□□ -1.82
SYF1YDR416W YNL040WP53960 456 aaPredicted RBP3.67□□□□□ -1.82
SYF1YDR416W TRM44Q02648 567 aaKnown RBP3.67□□□□□ -1.82
SYF1YDR416W ODC1Q03028 310 aa3.67□□□□□ -1.82
SYF1YDR416W YDL114WQ07530 308 aa3.67□□□□□ -1.82
SYF1YDR416W YAP7Q08182 245 aa3.67□□□□□ -1.82
SYF1YDR416W TIM18Q08749 192 aa3.67□□□□□ -1.82
SYF1YDR416W YPL199CQ08954 240 aa3.67□□□□□ -1.82
SYF1YDR416W TAF10Q12030 206 aa3.67□□□□□ -1.82
SYF1YDR416W PET20Q99373 253 aa3.67□□□□□ -1.82
SYF1YDR416W RPL20AP0CX23 172 aaKnown RBP3.67□□□□□ -1.82
SYF1YDR416W RPL20BP0CX24 172 aaPredicted RBP3.67□□□□□ -1.82
SYF1YDR416W AMD1P15274 810 aaKnown RBP3.67□□□□□ -1.82
SYF1YDR416W PUB1P32588 453 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
SYF1YDR416W HMT1P38074 348 aa3.67□□□□□ -1.82
SYF1YDR416W YPC1P38298 316 aa3.67□□□□□ -1.82
SYF1YDR416W MET30P39014 640 aa3.67□□□□□ -1.82
SYF1YDR416W WWM1P43582 211 aaKnown RBP3.67□□□□□ -1.82
SYF1YDR416W YGR042WP53227 271 aa3.67□□□□□ -1.82
SYF1YDR416W HCH1P53834 153 aa3.67□□□□□ -1.82
SYF1YDR416W CCE1Q03702 353 aa3.67□□□□□ -1.82
SYF1YDR416W YMR166CQ03829 368 aa3.67□□□□□ -1.82
SYF1YDR416W YEH2Q07950 538 aa3.67□□□□□ -1.82
SYF1YDR416W YNG1Q08465 219 aa3.67□□□□□ -1.82
SYF1YDR416W SNU23Q12368 194 aaPredicted RBP3.67□□□□□ -1.82
SYF1YDR416W YPR064WQ12492 139 aa3.67□□□□□ -1.82
SYF1YDR416W REP1P03871 373 aa3.66□□□□□ -1.82
SYF1YDR416W TSA1P34760 196 aaKnown RBP3.66□□□□□ -1.82
SYF1YDR416W YKL075CP36083 450 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 68.4 ms