RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	MSN2	P33748	704 aa		5.29	□□□□□ -1.56
CHL4	YDR254W	YKL187C	P34231	750 aa		5.29	□□□□□ -1.56
CHL4	YDR254W	EFM1	P38732	585 aa		5.29	□□□□□ -1.56
CHL4	YDR254W	YAL037W	P39728	267 aa		5.29	□□□□□ -1.56
CHL4	YDR254W	SMB1	P40018	196 aa	Known RBP	5.29	□□□□□ -1.56
CHL4	YDR254W	RRG9	P40156	214 aa		5.29	□□□□□ -1.56
CHL4	YDR254W	SYG1	P40528	902 aa		5.29	□□□□□ -1.56
CHL4	YDR254W	MRPL49	P40858	161 aa	Predicted RBP	5.29	□□□□□ -1.56
CHL4	YDR254W	TDA10	P42938	290 aa		5.29	□□□□□ -1.56
CHL4	YDR254W	YJR012C	P47087	207 aa		5.29	□□□□□ -1.56
CHL4	YDR254W	UBC11	P52492	156 aa		5.29	□□□□□ -1.56
CHL4	YDR254W	YIF1	P53845	314 aa	Known RBP	5.29	□□□□□ -1.56
CHL4	YDR254W	CDC14	Q00684	551 aa		5.29	□□□□□ -1.56
CHL4	YDR254W	RUB1	Q03919	77 aa		5.29	□□□□□ -1.56
CHL4	YDR254W	YML096W	Q04489	525 aa		5.29	□□□□□ -1.56
CHL4	YDR254W	TPO3	Q06451	622 aa		5.29	□□□□□ -1.56
CHL4	YDR254W	MRX9	Q07349	420 aa	Known RBP	5.29	□□□□□ -1.56
CHL4	YDR254W	YOR283W	Q12040	230 aa	Known RBP	5.29	□□□□□ -1.56
CHL4	YDR254W	YLL056C	Q12177	298 aa		5.29	□□□□□ -1.56
CHL4	YDR254W	SIR4	P11978	1358 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	POF1	P25576	258 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	MGT1	P26188	188 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	PMT2	P31382	759 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	RAD5	P32849	1169 aa	Predicted RBP	5.28	□□□□□ -1.56
CHL4	YDR254W	NTF2	P33331	125 aa	Known RBP	5.28	□□□□□ -1.56
CHL4	YDR254W	ELF1	P36053	145 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	CBP4	P37267	147 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	FMP23	P38231	175 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	IST2	P38250	946 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	PRS3	P38689	320 aa	Known RBP	5.28	□□□□□ -1.56
CHL4	YDR254W	ARP1	P38696	384 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	YIA6	P40556	373 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	IRC18	P47056	224 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	YNL092W	P53934	400 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	ASI3	P53983	676 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	CSN9	Q03981	162 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	DPP1	Q05521	289 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	YCT1	Q12235	531 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	ATG34	Q12292	412 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	Q0010	Q9ZZX9	128 aa		5.28	□□□□□ -1.56
CHL4	YDR254W	TYR1	P20049	452 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	IFM1	P25038	676 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	DCC1	P25559	380 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	SUA7	P29055	345 aa	Predicted RBP	5.27	□□□□□ -1.57
CHL4	YDR254W	HOM6	P31116	359 aa	Known RBP	5.27	□□□□□ -1.57
CHL4	YDR254W	YBR241C	P38142	488 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	CTK3	P46963	296 aa	Predicted RBP	5.27	□□□□□ -1.57
CHL4	YDR254W	TOS2	P50078	622 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	PEX31	P53203	462 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	CAF40	P53829	373 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	DUG3	P53871	357 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	YLR152C	P54072	576 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	SWF1	Q04629	336 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	INM2	Q05533	292 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	ECI1	Q05871	280 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	GAS2	Q06135	555 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	SSK1	Q07084	712 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	LDB18	Q07887	179 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	SKI7	Q08491	747 aa	Predicted RBP	5.27	□□□□□ -1.57
CHL4	YDR254W	RKI1	Q12189	258 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	RGT2	Q12300	763 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	IES3	Q12345	250 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	SNU23	Q12368	194 aa	Predicted RBP	5.27	□□□□□ -1.57
CHL4	YDR254W	RTR2	Q12378	196 aa		5.27	□□□□□ -1.57
CHL4	YDR254W	FOL3	Q12676	427 aa	Predicted RBP	5.27	□□□□□ -1.57
CHL4	YDR254W	EFG1	Q3E705	233 aa	Known RBP	5.27	□□□□□ -1.57
CHL4	YDR254W	YOR304C-A	O14468	76 aa		5.26	□□□□□ -1.57
CHL4	YDR254W	CTA1	P15202	515 aa		5.26	□□□□□ -1.57
CHL4	YDR254W	GLN3	P18494	730 aa		5.26	□□□□□ -1.57
CHL4	YDR254W	FUN19	P28003	413 aa	Predicted RBP	5.26	□□□□□ -1.57
CHL4	YDR254W	QRI5	P32344	111 aa		5.26	□□□□□ -1.57
CHL4	YDR254W	APE2	P32454	952 aa	Known RBP	5.26	□□□□□ -1.57
CHL4	YDR254W	YEF1	P32622	495 aa		5.26	□□□□□ -1.57
CHL4	YDR254W	SUI1	P32911	108 aa	Known RBP	5.26	□□□□□ -1.57
CHL4	YDR254W	POP6	P53218	158 aa		5.26	□□□□□ -1.57
CHL4	YDR254W	MTM1	P53320	366 aa		5.26	□□□□□ -1.57
CHL4	YDR254W	MPA43	P53583	542 aa	Predicted RBP	5.26	□□□□□ -1.57
CHL4	YDR254W	YVH1	Q02256	364 aa	Known RBP	5.26	□□□□□ -1.57
CHL4	YDR254W	CWC27	Q02770	301 aa		5.26	□□□□□ -1.57
CHL4	YDR254W	MAK3	Q03503	176 aa		5.26	□□□□□ -1.57
CHL4	YDR254W	CCE1	Q03702	353 aa		5.26	□□□□□ -1.57
CHL4	YDR254W	YDR387C	Q04162	555 aa		5.26	□□□□□ -1.57
CHL4	YDR254W	RRP40	Q08285	240 aa	Known RBP	5.26	□□□□□ -1.57
CHL4	YDR254W	THP3	Q12049	470 aa	Known RBP	5.26	□□□□□ -1.57
CHL4	YDR254W	TPO4	Q12256	659 aa		5.26	□□□□□ -1.57
CHL4	YDR254W	YCL001W-B	Q96VH2	84 aa		5.26	□□□□□ -1.57
CHL4	YDR254W	IZH4	Q99393	312 aa		5.26	□□□□□ -1.57
CHL4	YDR254W	MCK1	P21965	375 aa	Known RBP	5.25	□□□□□ -1.57
CHL4	YDR254W	BUB2	P26448	306 aa	Predicted RBP	5.25	□□□□□ -1.57
CHL4	YDR254W	TFC1	P32367	649 aa		5.25	□□□□□ -1.57
CHL4	YDR254W	COX13	P32799	129 aa		5.25	□□□□□ -1.57
CHL4	YDR254W	CTP1	P38152	299 aa		5.25	□□□□□ -1.57
CHL4	YDR254W	YHR035W	P38769	630 aa		5.25	□□□□□ -1.57
CHL4	YDR254W	FAA2	P39518	744 aa		5.25	□□□□□ -1.57
CHL4	YDR254W	RBG1	P39729	369 aa		5.25	□□□□□ -1.57
CHL4	YDR254W	LST7	P53237	242 aa		5.25	□□□□□ -1.57
CHL4	YDR254W	CPR8	P53728	308 aa		5.25	□□□□□ -1.57
CHL4	YDR254W	SNU56	Q03782	492 aa	Known RBP	5.25	□□□□□ -1.57
CHL4	YDR254W	PKR1	Q03880	122 aa	Known RBP	5.25	□□□□□ -1.57
CHL4	YDR254W	SLO1	Q3E784	85 aa		5.25	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 85.5 ms