Protein–RNA interactions for Protein: Q03919

RUB1, NEDD8-like protein RUB1, yeastyeast

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUB1Q03919 SSA3YBL075C 1950 nt13.48□□□□□ -0.25
RUB1Q03919 NSR1YGR159C 1245 nt12.49□□□□□ -0.41
RUB1Q03919 MDJ1YFL016C 1536 nt12.24□□□□□ -0.45
RUB1Q03919 NVJ2YPR091C 2313 nt11.53□□□□□ -0.56
RUB1Q03919 PAC11YDR488C 1602 nt11.5□□□□□ -0.57
RUB1Q03919 FPS1YLL043W 2010 nt11.4□□□□□ -0.58
RUB1Q03919 YML009W-BYML009W-B 477 nt11.34□□□□□ -0.59
RUB1Q03919 SSA4YER103W 1929 nt11.27□□□□□ -0.61
RUB1Q03919 YJL027CYJL027C 417 nt11.16□□□□□ -0.62
RUB1Q03919 SSA1YAL005C 1929 nt11.14□□□□□ -0.63
RUB1Q03919 SPT5YML010W 3192 nt11.08□□□□□ -0.64
RUB1Q03919 BDF1YLR399C 2061 nt11.06□□□□□ -0.64
RUB1Q03919 TAT1YBR069C 1860 nt10.89□□□□□ -0.67
RUB1Q03919 PUT4YOR348C 1884 nt10.87□□□□□ -0.67
RUB1Q03919 YBR190WYBR190W 312 nt10.85□□□□□ -0.67
RUB1Q03919 UME6YDR207C 2511 nt10.63□□□□□ -0.71
RUB1Q03919 NOP1YDL014W 984 nt10.55□□□□□ -0.72
RUB1Q03919 RTC3YHR087W 336 nt10.42□□□□□ -0.74
RUB1Q03919 BSC6YOL137W 1494 nt10.41□□□□□ -0.74
RUB1Q03919 DBP2YNL112W 1641 nt10.38□□□□□ -0.75
RUB1Q03919 POA1YBR022W 534 nt10.32□□□□□ -0.76
RUB1Q03919 ARE1YCR048W 1833 nt10.26□□□□□ -0.77
RUB1Q03919 YJL225CYJL225C 5277 nt10.26□□□□□ -0.77
RUB1Q03919 GUT2YIL155C 1950 nt10.1□□□□□ -0.79
RUB1Q03919 YHR049C-AYHR049C-A 297 nt10.09□□□□□ -0.79
RUB1Q03919 URN1YPR152C 1398 nt10.01□□□□□ -0.81
RUB1Q03919 MCH5YOR306C 1566 nt10□□□□□ -0.81
RUB1Q03919 BOR1YNL275W 1731 nt9.96□□□□□ -0.82
RUB1Q03919 MEP2YNL142W 1500 nt9.93□□□□□ -0.82
RUB1Q03919 PCH2YBR186W 1695 nt9.91□□□□□ -0.82
RUB1Q03919 RDN37-1RDN37-1 5354 nt9.88□□□□□ -0.83
RUB1Q03919 RDN37-2RDN37-2 5354 nt9.88□□□□□ -0.83
RUB1Q03919 YBR220CYBR220C 1683 nt9.87□□□□□ -0.83
RUB1Q03919 PIB2YGL023C 1908 nt9.76□□□□□ -0.85
RUB1Q03919 SEC11YIR022W 504 nt9.74□□□□□ -0.85
RUB1Q03919 SAH1YER043C 1350 nt9.72□□□□□ -0.85
RUB1Q03919 RPM1RPM1 483 nt9.71□□□□□ -0.86
RUB1Q03919 DCW1YKL046C 1350 nt9.7□□□□□ -0.86
RUB1Q03919 BUD23YCR047C 828 nt9.68□□□□□ -0.86
RUB1Q03919 SCJ1YMR214W 1134 nt9.66□□□□□ -0.86
RUB1Q03919 ALG12YNR030W 1656 nt9.63□□□□□ -0.87
RUB1Q03919 YMR090WYMR090W 684 nt9.59□□□□□ -0.87
RUB1Q03919 SDH1YKL148C 1923 nt9.54□□□□□ -0.88
RUB1Q03919 EMI2YDR516C 1503 nt9.54□□□□□ -0.88
RUB1Q03919 OPI9YLR338W 858 nt9.51□□□□□ -0.89
RUB1Q03919 RTF1YGL244W 1677 nt9.49□□□□□ -0.89
RUB1Q03919 RVS167YDR388W 1449 nt9.43□□□□□ -0.9
RUB1Q03919 HSL7YBR133C 2484 nt9.42□□□□□ -0.9
RUB1Q03919 NAB2YGL122C 1578 nt9.38□□□□□ -0.91
RUB1Q03919 PTK1YKL198C 1989 nt9.38□□□□□ -0.91
RUB1Q03919 YDL221WYDL221W 552 nt9.38□□□□□ -0.91
RUB1Q03919 RDN25-1RDN25-1 3396 nt9.37□□□□□ -0.91
RUB1Q03919 RDN25-2RDN25-2 3396 nt9.37□□□□□ -0.91
RUB1Q03919 HSP60YLR259C 1719 nt9.32□□□□□ -0.92
RUB1Q03919 DED1YOR204W 1815 nt9.32□□□□□ -0.92
RUB1Q03919 PTC2YER089C 1395 nt9.28□□□□□ -0.92
RUB1Q03919 NAR1YNL240C 1476 nt9.28□□□□□ -0.92
RUB1Q03919 BOP3YNL042W 1191 nt9.27□□□□□ -0.93
RUB1Q03919 YPS1YLR120C 1710 nt9.25□□□□□ -0.93
RUB1Q03919 SCC4YER147C 1875 nt9.25□□□□□ -0.93
RUB1Q03919 YHL050CYHL050C 2094 nt9.24□□□□□ -0.93
RUB1Q03919 SRX1YKL086W 384 nt9.23□□□□□ -0.93
RUB1Q03919 SPT8YLR055C 1809 nt9.22□□□□□ -0.93
RUB1Q03919 PUN1YLR414C 792 nt9.22□□□□□ -0.93
RUB1Q03919 HEL2YDR266C 1920 nt9.21□□□□□ -0.94
RUB1Q03919 YSC84YHR016C 1407 nt9.2□□□□□ -0.94
RUB1Q03919 FIS1YIL065C 468 nt9.17□□□□□ -0.94
RUB1Q03919 YHR165W-AYHR165W-A 312 nt9.16□□□□□ -0.94
RUB1Q03919 CMP2YML057W 1815 nt9.16□□□□□ -0.94
RUB1Q03919 TRN1tP(UGG)A 72 nt9.14□□□□□ -0.95
RUB1Q03919 SUF9tP(UGG)F 72 nt9.14□□□□□ -0.95
RUB1Q03919 SUF8tP(UGG)H 72 nt9.14□□□□□ -0.95
RUB1Q03919 tP(UGG)LtP(UGG)L 72 nt9.14□□□□□ -0.95
RUB1Q03919 SUF7tP(UGG)M 72 nt9.14□□□□□ -0.95
RUB1Q03919 tP(UGG)N1tP(UGG)N1 72 nt9.14□□□□□ -0.95
RUB1Q03919 tP(UGG)N2tP(UGG)N2 72 nt9.14□□□□□ -0.95
RUB1Q03919 tP(UGG)O1tP(UGG)O1 72 nt9.14□□□□□ -0.95
RUB1Q03919 SUF11tP(UGG)O2 72 nt9.14□□□□□ -0.95
RUB1Q03919 YAT1YAR035W 2064 nt9.13□□□□□ -0.95
RUB1Q03919 LCB1YMR296C 1677 nt9.13□□□□□ -0.95
RUB1Q03919 SFP1YLR403W 2052 nt9.09□□□□□ -0.95
RUB1Q03919 MET2YNL277W 1461 nt9.07□□□□□ -0.96
RUB1Q03919 DSK2YMR276W 1122 nt9.06□□□□□ -0.96
RUB1Q03919 NPP1YCR026C 2229 nt9.06□□□□□ -0.96
RUB1Q03919 GID7YCL039W 2238 nt9.06□□□□□ -0.96
RUB1Q03919 SSN3YPL042C 1668 nt9.05□□□□□ -0.96
RUB1Q03919 CAC2YML102W 1407 nt9.04□□□□□ -0.96
RUB1Q03919 YFL054CYFL054C 1941 nt9.03□□□□□ -0.96
RUB1Q03919 GLK1YCL040W 1503 nt9.02□□□□□ -0.97
RUB1Q03919 DAL1YIR027C 1383 nt9□□□□□ -0.97
RUB1Q03919 YDR095CYDR095C 411 nt8.99□□□□□ -0.97
RUB1Q03919 Q0182Q0182 405 nt8.98□□□□□ -0.97
RUB1Q03919 PBP1YGR178C 2169 nt8.97□□□□□ -0.97
RUB1Q03919 YGR021WYGR021W 873 nt8.95□□□□□ -0.98
RUB1Q03919 CYT2YKL087C 675 nt8.95□□□□□ -0.98
RUB1Q03919 IRC15YPL017C 1500 nt8.95□□□□□ -0.98
RUB1Q03919 PHO4YFR034C 939 nt8.93□□□□□ -0.98
RUB1Q03919 RPN10YHR200W 807 nt8.93□□□□□ -0.98
RUB1Q03919 PTP1YDL230W 1008 nt8.91□□□□□ -0.98
RUB1Q03919 GIS3YLR094C 1509 nt8.9□□□□□ -0.98
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms