RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W YPS5P53057 165 aa1.36□□□□□ -2.19
MSH5YDL154W YLR152CP54072 576 aa1.36□□□□□ -2.19
MSH5YDL154W RSM10Q03201 203 aa1.36□□□□□ -2.19
MSH5YDL154W UTP15Q04305 513 aaKnown RBP1.36□□□□□ -2.19
MSH5YDL154W APC4Q04601 652 aa1.36□□□□□ -2.19
MSH5YDL154W RNH1Q04740 348 aa1.36□□□□□ -2.19
MSH5YDL154W RDL2Q08742 149 aaKnown RBP1.36□□□□□ -2.19
MSH5YDL154W ADE6P38972 1358 aaKnown RBP1.35□□□□□ -2.19
MSH5YDL154W GPI12P23797 304 aa1.35□□□□□ -2.19
MSH5YDL154W RPL16BP26785 198 aaKnown RBP1.35□□□□□ -2.19
MSH5YDL154W RCK2P38623 610 aa1.35□□□□□ -2.19
MSH5YDL154W YJR054WP47114 497 aa1.35□□□□□ -2.19
MSH5YDL154W SEH1P53011 349 aaKnown RBP1.35□□□□□ -2.19
MSH5YDL154W SWC4P53201 476 aa1.35□□□□□ -2.19
MSH5YDL154W YNL260CP53846 198 aa1.35□□□□□ -2.19
MSH5YDL154W SNX41Q04053 625 aa1.35□□□□□ -2.19
MSH5YDL154W UBX2Q04228 584 aa1.35□□□□□ -2.19
MSH5YDL154W BCP1Q06338 283 aa1.35□□□□□ -2.19
MSH5YDL154W MRX9Q07349 420 aaKnown RBP1.35□□□□□ -2.19
MSH5YDL154W SLM3Q12093 417 aa1.35□□□□□ -2.19
MSH5YDL154W POM33Q12164 279 aa1.35□□□□□ -2.19
MSH5YDL154W RPN6Q12377 434 aa1.35□□□□□ -2.19
MSH5YDL154W MRPL20P22354 195 aaPredicted RBP1.35□□□□□ -2.19
MSH5YDL154W SPS19P32573 292 aaKnown RBP1.35□□□□□ -2.19
MSH5YDL154W ECT1P33412 323 aa1.35□□□□□ -2.19
MSH5YDL154W MRPS9P38120 278 aa1.35□□□□□ -2.19
MSH5YDL154W GGC1P38988 300 aa1.35□□□□□ -2.19
MSH5YDL154W VHT1P53241 593 aa1.35□□□□□ -2.19
MSH5YDL154W SUR7P54003 302 aa1.35□□□□□ -2.19
MSH5YDL154W TPS1Q00764 495 aaKnown RBP1.35□□□□□ -2.19
MSH5YDL154W SPO19Q03029 223 aa1.35□□□□□ -2.19
MSH5YDL154W YOL029CQ08187 201 aa1.35□□□□□ -2.19
MSH5YDL154W VIK1Q12045 647 aa1.35□□□□□ -2.19
MSH5YDL154W SSK22P25390 1331 aaPredicted RBP1.35□□□□□ -2.19
MSH5YDL154W REP1P03871 373 aa1.34□□□□□ -2.19
MSH5YDL154W ZIP1P31111 875 aa1.34□□□□□ -2.19
MSH5YDL154W RIB7P33312 244 aa1.34□□□□□ -2.19
MSH5YDL154W MND1P53102 219 aa1.34□□□□□ -2.19
MSH5YDL154W YNL247WP53852 767 aaKnown RBP1.34□□□□□ -2.19
MSH5YDL154W ERV25P54837 211 aaKnown RBP1.34□□□□□ -2.19
MSH5YDL154W GPN3Q06543 272 aa1.34□□□□□ -2.19
MSH5YDL154W BER1Q06688 274 aaKnown RBP1.34□□□□□ -2.19
MSH5YDL154W RPN8Q08723 338 aaKnown RBP1.34□□□□□ -2.19
MSH5YDL154W TAF10Q12030 206 aa1.34□□□□□ -2.19
MSH5YDL154W APC9Q12107 265 aa1.34□□□□□ -2.19
MSH5YDL154W MCT1Q12283 360 aa1.34□□□□□ -2.19
MSH5YDL154W ILV1P00927 576 aaKnown RBP1.34□□□□□ -2.2
MSH5YDL154W RPS19AP07280 144 aaKnown RBP1.34□□□□□ -2.2
MSH5YDL154W RPS19BP07281 144 aaPredicted RBP1.34□□□□□ -2.2
MSH5YDL154W OM45P16547 393 aa1.34□□□□□ -2.2
MSH5YDL154W PPQ1P32945 549 aa1.34□□□□□ -2.2
MSH5YDL154W MRPL37P36532 105 aa1.34□□□□□ -2.2
MSH5YDL154W SHE1P38200 338 aa1.34□□□□□ -2.2
MSH5YDL154W EFM1P38732 585 aa1.34□□□□□ -2.2
MSH5YDL154W RRT13P40042 185 aa1.34□□□□□ -2.2
MSH5YDL154W YFL012WP43580 148 aa1.34□□□□□ -2.2
MSH5YDL154W PMT4P46971 762 aa1.34□□□□□ -2.2
MSH5YDL154W MRX5P47007 382 aa1.34□□□□□ -2.2
MSH5YDL154W YGL185CP53100 379 aa1.34□□□□□ -2.2
MSH5YDL154W OKP1P53298 406 aa1.34□□□□□ -2.2
MSH5YDL154W ECM11Q04110 302 aa1.34□□□□□ -2.2
MSH5YDL154W API2Q04413 109 aa1.34□□□□□ -2.2
MSH5YDL154W LAG2Q92325 660 aa1.34□□□□□ -2.2
MSH5YDL154W CSF1Q12150 2958 aa1.34□□□□□ -2.2
MSH5YDL154W LAA1P39526 2014 aa1.34□□□□□ -2.2
MSH5YDL154W SWI1P09547 1314 aa1.34□□□□□ -2.2
MSH5YDL154W YSR3P23501 404 aa1.33□□□□□ -2.2
MSH5YDL154W SPR1P32603 445 aa1.33□□□□□ -2.2
MSH5YDL154W PDC2P32896 925 aa1.33□□□□□ -2.2
MSH5YDL154W RFT1P38206 574 aaPredicted RBP1.33□□□□□ -2.2
MSH5YDL154W TAE1P38340 232 aa1.33□□□□□ -2.2
MSH5YDL154W PET100P38958 111 aa1.33□□□□□ -2.2
MSH5YDL154W SED5Q01590 340 aa1.33□□□□□ -2.2
MSH5YDL154W INP1Q03694 420 aa1.33□□□□□ -2.2
MSH5YDL154W ERV41Q04651 352 aa1.33□□□□□ -2.2
MSH5YDL154W ASR1Q06834 288 aa1.33□□□□□ -2.2
MSH5YDL154W SGT2Q12118 346 aaKnown RBP1.33□□□□□ -2.2
MSH5YDL154W YPL245WQ12179 454 aaKnown RBP1.33□□□□□ -2.2
MSH5YDL154W YPR064WQ12492 139 aa1.33□□□□□ -2.2
MSH5YDL154W FMP16Q12497 93 aa1.33□□□□□ -2.2
MSH5YDL154W MSS116P15424 664 aaKnown RBP1.33□□□□□ -2.2
MSH5YDL154W HPR1P17629 752 aaKnown RBP1.33□□□□□ -2.2
MSH5YDL154W GTO1P48239 356 aa1.33□□□□□ -2.2
MSH5YDL154W FMP48P53233 369 aa1.33□□□□□ -2.2
MSH5YDL154W YMR209CQ03648 457 aa1.33□□□□□ -2.2
MSH5YDL154W CSI1Q04368 295 aa1.33□□□□□ -2.2
MSH5YDL154W GMC1Q04399 608 aa1.33□□□□□ -2.2
MSH5YDL154W PRM4Q12498 284 aa1.33□□□□□ -2.2
MSH5YDL154W RPL24AP04449 155 aaKnown RBP1.32□□□□□ -2.2
MSH5YDL154W SSA3P09435 649 aaKnown RBP1.32□□□□□ -2.2
MSH5YDL154W RPB4P20433 221 aaPredicted RBP1.32□□□□□ -2.2
MSH5YDL154W SKG6P32900 734 aaPredicted RBP1.32□□□□□ -2.2
MSH5YDL154W MRPL6P32904 214 aa1.32□□□□□ -2.2
MSH5YDL154W CBF5P33322 483 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
MSH5YDL154W MID2P36027 376 aa1.32□□□□□ -2.2
MSH5YDL154W YKL070WP36087 169 aa1.32□□□□□ -2.2
MSH5YDL154W MRP21P38175 177 aa1.32□□□□□ -2.2
MSH5YDL154W SHE3P38272 425 aaKnown RBP1.32□□□□□ -2.2
MSH5YDL154W AGP3P43548 558 aa1.32□□□□□ -2.2
MSH5YDL154W GCD14P46959 383 aaPredicted RBP1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms