RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W YOR238WQ08634 303 aa2.01□□□□□ -2.09
NUP170YBL079W YPL162CQ12042 273 aa2.01□□□□□ -2.09
NUP170YBL079W SIA1Q12212 622 aa2.01□□□□□ -2.09
NUP170YBL079W YDR215CQ12240 137 aa2.01□□□□□ -2.09
NUP170YBL079W VAM3Q12241 283 aa2.01□□□□□ -2.09
NUP170YBL079W YPT6Q99260 215 aa2.01□□□□□ -2.09
NUP170YBL079W LSB5P25369 354 aa2.01□□□□□ -2.09
NUP170YBL079W GFD2P25370 566 aaKnown RBP2.01□□□□□ -2.09
NUP170YBL079W PAP1P29468 568 aaKnown RBP2.01□□□□□ -2.09
NUP170YBL079W SIP2P34164 415 aaKnown RBP2.01□□□□□ -2.09
NUP170YBL079W QDR2P40474 542 aa2.01□□□□□ -2.09
NUP170YBL079W AAD14P42884 376 aa2.01□□□□□ -2.09
NUP170YBL079W YPT32P51996 222 aaKnown RBP2.01□□□□□ -2.09
NUP170YBL079W TNA1P53322 534 aa2.01□□□□□ -2.09
NUP170YBL079W RNY1Q02933 434 aaKnown RBP2.01□□□□□ -2.09
NUP170YBL079W GAL83Q04739 417 aa2.01□□□□□ -2.09
NUP170YBL079W SYC1Q08553 188 aaPredicted RBP2.01□□□□□ -2.09
NUP170YBL079W YOL159C-AQ3E769 90 aa2.01□□□□□ -2.09
NUP170YBL079W YBR126W-AQ8TGU7 68 aa2.01□□□□□ -2.09
NUP170YBL079W ACC1Q00955 2233 aaKnown RBP2.01□□□□□ -2.09
NUP170YBL079W MF(ALPHA)1P01149 165 aa2□□□□□ -2.09
NUP170YBL079W PEX3P28795 441 aa2□□□□□ -2.09
NUP170YBL079W COQ2P32378 372 aa2□□□□□ -2.09
NUP170YBL079W VPS17P32913 551 aa2□□□□□ -2.09
NUP170YBL079W PEX32P38292 413 aa2□□□□□ -2.09
NUP170YBL079W ALY2P47029 1046 aa2□□□□□ -2.09
NUP170YBL079W YGR042WP53227 271 aa2□□□□□ -2.09
NUP170YBL079W DUG3P53871 357 aa2□□□□□ -2.09
NUP170YBL079W RRP17Q04031 235 aaPredicted RBP2□□□□□ -2.09
NUP170YBL079W YLR122CQ12312 125 aa2□□□□□ -2.09
NUP170YBL079W PCL9Q12477 304 aa2□□□□□ -2.09
NUP170YBL079W ADF1Q2V2Q1 113 aa2□□□□□ -2.09
NUP170YBL079W TOR2P32600 2474 aaKnown RBP2□□□□□ -2.09
NUP170YBL079W TRP4P07285 380 aaPredicted RBP2□□□□□ -2.09
NUP170YBL079W DGR2P32330 852 aa2□□□□□ -2.09
NUP170YBL079W HSP150P32478 413 aa2□□□□□ -2.09
NUP170YBL079W PUB1P32588 453 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
NUP170YBL079W VMA8P32610 256 aaKnown RBP2□□□□□ -2.09
NUP170YBL079W HBS1P32769 611 aaKnown RBP2□□□□□ -2.09
NUP170YBL079W TIM12P32830 109 aa2□□□□□ -2.09
NUP170YBL079W RIB1P38066 345 aa2□□□□□ -2.09
NUP170YBL079W SMX2P40204 77 aaKnown RBP2□□□□□ -2.09
NUP170YBL079W TRS85P46944 698 aa2□□□□□ -2.09
NUP170YBL079W RBL2P48606 106 aaKnown RBP2□□□□□ -2.09
NUP170YBL079W PMT5P52867 743 aa2□□□□□ -2.09
NUP170YBL079W PNP1Q05788 311 aa2□□□□□ -2.09
NUP170YBL079W YLR346CQ06139 101 aa2□□□□□ -2.09
NUP170YBL079W PIN3Q06449 215 aa2□□□□□ -2.09
NUP170YBL079W MRX9Q07349 420 aaKnown RBP2□□□□□ -2.09
NUP170YBL079W PRM3Q08931 133 aa2□□□□□ -2.09
NUP170YBL079W TY4A-HQ6Q5P6 413 aa2□□□□□ -2.09
NUP170YBL079W CBF1P17106 351 aa2□□□□□ -2.09
NUP170YBL079W ERD2P18414 219 aa2□□□□□ -2.09
NUP170YBL079W CCA1P21269 546 aa2□□□□□ -2.09
NUP170YBL079W RER1P25560 188 aa2□□□□□ -2.09
NUP170YBL079W DAL80P26343 269 aa2□□□□□ -2.09
NUP170YBL079W PSD1P39006 500 aa2□□□□□ -2.09
NUP170YBL079W AIM2P39721 246 aa2□□□□□ -2.09
NUP170YBL079W NTA1P40354 457 aa2□□□□□ -2.09
NUP170YBL079W AIM20P40451 204 aa2□□□□□ -2.09
NUP170YBL079W LSM1P47017 172 aaKnown RBP2□□□□□ -2.09
NUP170YBL079W RRB1Q04225 511 aaKnown RBP2□□□□□ -2.09
NUP170YBL079W PEX12Q04370 399 aa2□□□□□ -2.09
NUP170YBL079W YRA1Q12159 226 aaKnown RBP2□□□□□ -2.09
NUP170YBL079W RDL1Q12305 139 aaKnown RBP2□□□□□ -2.09
NUP170YBL079W JLP1Q12358 412 aa2□□□□□ -2.09
NUP170YBL079W SWM1Q12379 170 aa2□□□□□ -2.09
NUP170YBL079W OPI3P05375 206 aa1.99□□□□□ -2.09
NUP170YBL079W SGA1P08019 549 aa1.99□□□□□ -2.09
NUP170YBL079W SAM35P14693 329 aa1.99□□□□□ -2.09
NUP170YBL079W MDH2P22133 377 aa1.99□□□□□ -2.09
NUP170YBL079W AFG1P32317 509 aa1.99□□□□□ -2.09
NUP170YBL079W MRPL17P36528 281 aa1.99□□□□□ -2.09
NUP170YBL079W PRS4P38063 326 aaPredicted RBP1.99□□□□□ -2.09
NUP170YBL079W YBL029WP38201 376 aa1.99□□□□□ -2.09
NUP170YBL079W PUG1P40100 303 aa1.99□□□□□ -2.09
NUP170YBL079W MAM33P40513 266 aa1.99□□□□□ -2.09
NUP170YBL079W DIM1P41819 318 aaKnown RBP1.99□□□□□ -2.09
NUP170YBL079W CAF16P43569 289 aa1.99□□□□□ -2.09
NUP170YBL079W YDL183CP48569 320 aa1.99□□□□□ -2.09
NUP170YBL079W TPC1P53257 314 aa1.99□□□□□ -2.09
NUP170YBL079W SYF2P53277 215 aaPredicted RBP1.99□□□□□ -2.09
NUP170YBL079W BNA7Q04066 261 aa1.99□□□□□ -2.09
NUP170YBL079W SPC24Q04477 213 aa1.99□□□□□ -2.09
NUP170YBL079W ARV1Q06541 321 aa1.99□□□□□ -2.09
NUP170YBL079W TDH1P00360 332 aaKnown RBP1.99□□□□□ -2.09
NUP170YBL079W CDC28P00546 298 aaKnown RBP1.99□□□□□ -2.09
NUP170YBL079W RPB8P20436 146 aa1.99□□□□□ -2.09
NUP170YBL079W IDP1P21954 428 aaKnown RBP1.99□□□□□ -2.09
NUP170YBL079W RCN1P36054 211 aa1.99□□□□□ -2.09
NUP170YBL079W PTH1P38876 190 aaKnown RBP1.99□□□□□ -2.09
NUP170YBL079W TIS11P47977 285 aa1.99□□□□□ -2.09
NUP170YBL079W NIT3P49954 291 aa1.99□□□□□ -2.09
NUP170YBL079W RNH201P53942 307 aa1.99□□□□□ -2.09
NUP170YBL079W SED1Q01589 338 aa1.99□□□□□ -2.09
NUP170YBL079W SPO19Q03029 223 aa1.99□□□□□ -2.09
NUP170YBL079W ACL4Q03771 387 aa1.99□□□□□ -2.09
NUP170YBL079W GRX3Q03835 250 aa1.99□□□□□ -2.09
NUP170YBL079W SPR28Q04921 423 aa1.99□□□□□ -2.09
NUP170YBL079W YMR226CQ05016 267 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms