RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCL1	YOL010W	YMR010W	Q03687	405 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	SHE9	Q04172	456 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	ARP10	Q04549	284 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	YHC1	Q05900	231 aa	Known RBP	4.11	□□□□□ -1.75
RCL1	YOL010W	BUR2	Q05949	395 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	YLR413W	Q06689	675 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	SYO1	Q07395	620 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	SLF1	Q12034	447 aa	Known RBP	4.11	□□□□□ -1.75
RCL1	YOL010W	RDL1	Q12305	139 aa	Known RBP	4.11	□□□□□ -1.75
RCL1	YOL010W	YMR085W	P0CF18	432 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	BAR1	P12630	587 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	UNG1	P12887	359 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	KGD1	P20967	1014 aa	Known RBP	4.1	□□□□□ -1.75
RCL1	YOL010W	MRPS28	P21771	286 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	RFA1	P22336	621 aa	Known RBP	4.1	□□□□□ -1.75
RCL1	YOL010W	YCL049C	P25577	312 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	PBN1	P25580	416 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	PHO91	P27514	894 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	GDH2	P33327	1092 aa	Known RBP	4.1	□□□□□ -1.75
RCL1	YOL010W	HIS7	P33734	552 aa	Known RBP	4.1	□□□□□ -1.75
RCL1	YOL010W	PTC1	P35182	281 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	CHK1	P38147	527 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	THO1	P40040	218 aa	Known RBP	4.1	□□□□□ -1.75
RCL1	YOL010W	PTR3	P43606	678 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	CDH1	P53197	566 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	COG2	P53271	262 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	NAN1	Q02931	896 aa	Known RBP	4.1	□□□□□ -1.75
RCL1	YOL010W	MMT1	Q03218	510 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	ABZ2	Q03266	374 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	RIM13	Q03792	727 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	SPC24	Q04477	213 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	RTT103	Q05543	409 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	DCS1	Q06151	350 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	YLR036C	Q07986	203 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	NTG2	Q08214	380 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	RRT8	Q08219	342 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	HNT3	Q08702	217 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	JLP1	Q12358	412 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	RTR2	Q12378	196 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	SNF8	Q12483	233 aa		4.1	□□□□□ -1.75
RCL1	YOL010W	SUI3	P09064	285 aa	Known RBP	4.09	□□□□□ -1.75
RCL1	YOL010W	TOP3	P13099	656 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	SPO7	P18410	259 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	EXO70	P19658	623 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	DPB2	P24482	689 aa	Predicted RBP	4.09	□□□□□ -1.75
RCL1	YOL010W	RER1	P25560	188 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	SEC17	P32602	292 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	NIC96	P34077	839 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	YOR062C	P36025	268 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	SRL3	P36167	246 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	FAA2	P39518	744 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	YJL193W	P39542	402 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	GDI1	P39958	451 aa	Known RBP	4.09	□□□□□ -1.75
RCL1	YOL010W	RGI1	P40043	161 aa	Predicted RBP	4.09	□□□□□ -1.75
RCL1	YOL010W	JLP2	P40206	208 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	YIL077C	P40508	320 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	SYG1	P40528	902 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	TRS85	P46944	698 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	COX16	P47081	118 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	IMA1	P53051	589 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	MEP3	P53390	489 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	CIK1	Q01649	594 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	YKR011C	Q02209	353 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	NCE101	Q02820	53 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	KAP120	Q02932	1032 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	URC2	Q04411	772 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	MLC2	Q06580	163 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	SNA4	Q07549	140 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	YOL131W	Q08270	108 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	YDL109C	Q12103	647 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	YDL180W	Q12301	547 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	RPN6	Q12377	434 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	YPT6	Q99260	215 aa		4.09	□□□□□ -1.75
RCL1	YOL010W	CBP2	P03874	630 aa	Predicted RBP	4.08	□□□□□ -1.76
RCL1	YOL010W	RPS8A	P0CX39	200 aa	Known RBP	4.08	□□□□□ -1.76
RCL1	YOL010W	RPS8B	P0CX40	200 aa	Known RBP	4.08	□□□□□ -1.76
RCL1	YOL010W	PET122	P10355	254 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	ZWF1	P11412	505 aa	Known RBP	4.08	□□□□□ -1.76
RCL1	YOL010W	YAK1	P14680	807 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	THR1	P17423	357 aa	Known RBP	4.08	□□□□□ -1.76
RCL1	YOL010W	UTR1	P21373	530 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	MSN4	P33749	630 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	MRPL17	P36528	281 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	ECM14	P38836	430 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	YHR177W	P38867	453 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	RSP5	P39940	809 aa	Known RBP	4.08	□□□□□ -1.76
RCL1	YOL010W	PCP1	P53259	346 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	YMR102C	Q03177	834 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	MRPS17	Q03246	237 aa	Predicted RBP	4.08	□□□□□ -1.76
RCL1	YOL010W	YTH1	Q06102	208 aa	Predicted RBP	4.08	□□□□□ -1.76
RCL1	YOL010W	YDL114W	Q07530	308 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	YPD1	Q07688	167 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	FMP40	Q08968	688 aa	Predicted RBP	4.08	□□□□□ -1.76
RCL1	YOL010W	SRL2	Q12020	392 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	NSL1	Q12143	216 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	RBD2	Q12270	262 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	ISA2	Q12425	185 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	FRE6	Q12473	712 aa		4.08	□□□□□ -1.76
RCL1	YOL010W	TDH1	P00360	332 aa	Known RBP	4.07	□□□□□ -1.76
RCL1	YOL010W	SIR3	P06701	978 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms